NO22G01970.1, NO22G01970.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G01970.1
Unique NameNO22G01970.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1599
Alignment locationchr22:587248..589416 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:587248..589416 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G01970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01970NO22G01970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G01970.1NO22G01970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G01970.1.cds1NO22G01970.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G01970.1.cds2NO22G01970.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G01970.1.cds3NO22G01970.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO22G01970.1.cds4NO22G01970.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G01970.1 ID=NO22G01970.1|Name=NO22G01970.1|organism=Nannochloropsis oceanica|type=mRNA|length=1599bp
ATGAACAGCTTGGGCCTGGTCGCAGGCTACGACACCGAGGAAGACGAGGA
GGACGACTCACGTCCGCAGCAGCAGCAGCAGCAGCAGCAGACAGTGAAGA
AAGAGGAGGAGAAGGAAGGGACGGAGCAGCATGCCGGTAATGTCAACGGC
GGCCTACTTGGCTACAGATACCGCGCCGACTCCCACGCCGAAGACGAGGG
CGACACAGGAGCAGCAGCAGCAGCAGCAGCACCGGGACTAGGCGCTCTCC
AGGGTCCCTCCTGGCCGCCATCCCCTGCCTCCCACCACCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCCCTCCTCCTCCACCTCCCACTCTGG
CTCCCGCTCCTTCCCGTCTTCCCCCTTTGTAGGGGAAGAGAGCAGCCACC
AGGGAGGGAGGGAGGGAGGGCTGGCGTGGCAGTCCCCCCTTATTCCTCCA
GGAGGAGGAGGGGGAGGAGAGACGTACTCCGTACCCGTTTCCCCTTTCAC
TCGCGAGACAGCCGAGCTCACTCTCGATGACGAGGAGGAGGGAGGGAGGA
AGGGAGAGGAGGAGGTGACGTATTTTGATTTGTTGCCGCCGGAGGTGGAG
GGGGAGGAGTGTGATCCGGTGGTACAGCAACGAGTGGTTGATTACATGGG
TCAGTGGACAGCAGCCGCTCCGGACGAGGAGGAGAAAGGGGAGGAGGAGG
GGGTGGGGAGAGGGAGGGGGAGGAAGAGGAGGAGGAATGGGGGAGTGGGG
GGCTTCACGGCGAATTTAAAAGAGAAGAAGGATTTCGGGAATCCGGAGTT
GTTGCAACGGATCATCGAGGTGTTTGGGATCGACGAGTGGGCTTCCAATT
ACCCTCCTCATCTCTTCTCGCCCCATGCCTACGAAGAGGGGGATTACATG
GAGAGGATACGAAGCACCCAGCGACAGCTGGAAATAAGCATGCTACAGCA
ACAAGCTGCTGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TTACCGCCTCCAGCACGGACACCACCCGTCCTCCCCTTCCTCCTCCTCCT
TTCTCCTCCTCCTCCTCCACTTCCTCCTCCTCCTTGCACCAACAGCACGT
ATCTCTGCGAGCGCGGGAAGGGAGGGAGGGACCGCCCGCGGTCGCGCGTG
TCGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGAGGAGGAGGC
ATACCTACACCTCCTCTGTCTTGGCCCCTCCCAGGCCCTCCCTCCCTTCC
GCCCTCCTCCTCTTCCTCCTCCACGGCCTCGGTGGCCGTGCGAGCCGCAC
TGGCACTCACGCAAAAAGTCCAACAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGGCGCTTGCTTTCGGGGCCAGGAAGGGAGGGAGGGAGGG
GGGGAAGGTACTGCCGCAGCTGCAGGAGCAGCAGCAGACACAGCAGCAGC
AGCAGCAGTTCCAAGAGGCCAAAAAACAGGCAGAGCAAGTGGCTTCACGA
CTGGCACGGATGGGAGGGAGGGAGGGAGGGGTAGGGGGGAAGCCACCGTC
GCCTGGCGTGGATGAGCGGGGAAAGAAGCGGAGTCGATTCACCGACTAG
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protein sequence of NO22G01970.1

>NO22G01970.1-protein ID=NO22G01970.1-protein|Name=NO22G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=533bp
MNSLGLVAGYDTEEDEEDDSRPQQQQQQQQTVKKEEEKEGTEQHAGNVNG
GLLGYRYRADSHAEDEGDTGAAAAAAAPGLGALQGPSWPPSPASHHQQQQ
QQQQQQQQPSSSTSHSGSRSFPSSPFVGEESSHQGGREGGLAWQSPLIPP
GGGGGGETYSVPVSPFTRETAELTLDDEEEGGRKGEEEVTYFDLLPPEVE
GEECDPVVQQRVVDYMGQWTAAAPDEEEKGEEEGVGRGRGRKRRRNGGVG
GFTANLKEKKDFGNPELLQRIIEVFGIDEWASNYPPHLFSPHAYEEGDYM
ERIRSTQRQLEISMLQQQAAVLPPSLPPSLPPSLTASSTDTTRPPLPPPP
FSSSSSTSSSSLHQQHVSLRAREGREGPPAVARVVSSSSSSSSSSKGGGG
IPTPPLSWPLPGPPSLPPSSSSSSTASVAVRAALALTQKVQQQQQQQQQQ
QQQQALAFGARKGGREGGKVLPQLQEQQQTQQQQQQFQEAKKQAEQVASR
LARMGGREGGVGGKPPSPGVDERGKKRSRFTD*
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mRNA from alignment at chr22:587248..589416-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G01970.1 ID=NO22G01970.1|Name=NO22G01970.1|organism=Nannochloropsis oceanica|type=mRNA|length=2169bp|location=Sequence derived from alignment at chr22:587248..589416- (Nannochloropsis oceanica)
ATGAACAGCTTGGGCCTGGTCGCAGGCTACGACACCGAGGAAGACGAGGA
GGACGACTCACGTCCGCAGCAGCAGCAGCAGCAGCAGCAGACAGTGAAGA
AAGAGGAGGAGAAGGAAGGGACGGAGCAGCATGCCGGTATGTAAATTGGA
GCTCCCCTTTCCTCCCTCCCTTCCTCCCTGTCTCCCTCCCTCTCTCTCTT
CCCCTCTTCCTGCTCTCTTACGCACGCCCTGCATTCCTTATGAAAAACAA
CAACAACAAAACCTGACATCAGCACACACACGCGTTAGGTACTCAATCCC
TCTCTCCCTCCCTCCCTCCCTCTCTACTTCCCTCGCTCCCTGTCAGGTAA
TGTCAACGGCGGCCTACTTGGCTACAGATACCGCGCCGACTCCCACGCCG
AAGACGAGGGCGACACAGGAGCAGCAGCAGCAGCAGCAGCACCGGGACTA
GGCGCTCTCCAGGGTCCCTCCTGGCCGCCATCCCCTGCCTCCCACCACCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCCTCCTCCTCCACCT
CCCACTCTGGCTCCCGCTCCTTCCCGTCTTCCCCCTTTGTAGGGGAAGAG
AGCAGCCACCAGGGAGGGAGGGAGGGAGGGCTGGCGTGGCAGTCCCCCCT
TATTCCTCCAGGAGGAGGAGGGGGAGGAGAGACGTACTCCGTACCCGTTT
CCCCTTTCACTCGCGAGACAGCCGAGCTCACTCTCGATGACGAGGAGGAG
GGAGGGAGGAAGGGAGAGGAGGAGGTGACGTATTTTGATTTGTTGCCGCC
GGAGGTGGAGGGGGAGGAGTGTGATCCGGTGGTACAGCAACGAGTGGTTG
ATTACATGGGTCAGTGGACAGCAGCCGCTCCGGACGAGGAGGAGAAAGGG
GAGGAGGAGGGGGTGGGGAGAGGGAGGGGGAGGAAGAGGAGGAGGAATGG
GGGAGTGGGGGGCTTCACGGCGAATTTAAAAGAGAAGAAGGATTTCGGGA
ATCCGGAGTTGTTGCAACGGGTAGGGAGGGAGGGAGGGAGGGAGGTAGGG
AGGTAGGGAGGTAGGTAGGTAGGTAGGTAGGTAGGGAGGGTTGTATTTGT
AGCAGCGGGGACGGTGGAGGCACTGACCGTCCTTCCCTCCCCCTCCTCCC
ACCCCCCCCCTCCTTACTAGATCATCGAGGTGTTTGGGATCGACGAGTGG
GCTTCCAATTACCCTCCTCATCTCTTCTCGCCCCATGCCTACGAAGAGGG
GGATTACATGGAGAGGATACGAAGCACCCAGCGACAGCTGGAAATAAGCA
TGCTACAGGTACATCCTCCCTCCCTCCCTCCCCTCCTCTCTCCCTCCCTC
CTTCACGCCTACGGAGAGGAGGACTCGATGGAGAAAATCCGATCGTTCCG
CCCGCCCACCCGCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTTCTTTCATTTTGTTGTTCACTCACCCTTCTCCGCTTCCTGTCCCTCTT
TCCTATTCCCTCGTCTAGCAACAAGCTGCTGTCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTTACCGCCTCCAGCACGGACACCACCCGTC
CTCCCCTTCCTCCTCCTCCTTTCTCCTCCTCCTCCTCCACTTCCTCCTCC
TCCTTGCACCAACAGCACGTATCTCTGCGAGCGCGGGAAGGGAGGGAGGG
ACCGCCCGCGGTCGCGCGTGTCGTCAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAAGGGAGGAGGAGGCATACCTACACCTCCTCTGTCTTGGCCCCTC
CCAGGCCCTCCCTCCCTTCCGCCCTCCTCCTCTTCCTCCTCCACGGCCTC
GGTGGCCGTGCGAGCCGCACTGGCACTCACGCAAAAAGTCCAACAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGCTTGCTTTCGGGGCC
AGGAAGGGAGGGAGGGAGGGGGGGAAGGTACTGCCGCAGCTGCAGGAGCA
GCAGCAGACACAGCAGCAGCAGCAGCAGTTCCAAGAGGCCAAAAAACAGG
CAGAGCAAGTGGCTTCACGACTGGCACGGATGGGAGGGAGGGAGGGAGGG
GTAGGGGGGAAGCCACCGTCGCCTGGCGTGGATGAGCGGGGAAAGAAGCG
GAGTCGATTCACCGACTAG
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Coding sequence (CDS) from alignment at chr22:587248..589416-

>NO22G01970.1 ID=NO22G01970.1|Name=NO22G01970.1|organism=Nannochloropsis oceanica|type=CDS|length=1599bp|location=Sequence derived from alignment at chr22:587248..589416- (Nannochloropsis oceanica)
ATGAACAGCTTGGGCCTGGTCGCAGGCTACGACACCGAGGAAGACGAGGA
GGACGACTCACGTCCGCAGCAGCAGCAGCAGCAGCAGCAGACAGTGAAGA
AAGAGGAGGAGAAGGAAGGGACGGAGCAGCATGCCGGTAATGTCAACGGC
GGCCTACTTGGCTACAGATACCGCGCCGACTCCCACGCCGAAGACGAGGG
CGACACAGGAGCAGCAGCAGCAGCAGCAGCACCGGGACTAGGCGCTCTCC
AGGGTCCCTCCTGGCCGCCATCCCCTGCCTCCCACCACCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCCCTCCTCCTCCACCTCCCACTCTGG
CTCCCGCTCCTTCCCGTCTTCCCCCTTTGTAGGGGAAGAGAGCAGCCACC
AGGGAGGGAGGGAGGGAGGGCTGGCGTGGCAGTCCCCCCTTATTCCTCCA
GGAGGAGGAGGGGGAGGAGAGACGTACTCCGTACCCGTTTCCCCTTTCAC
TCGCGAGACAGCCGAGCTCACTCTCGATGACGAGGAGGAGGGAGGGAGGA
AGGGAGAGGAGGAGGTGACGTATTTTGATTTGTTGCCGCCGGAGGTGGAG
GGGGAGGAGTGTGATCCGGTGGTACAGCAACGAGTGGTTGATTACATGGG
TCAGTGGACAGCAGCCGCTCCGGACGAGGAGGAGAAAGGGGAGGAGGAGG
GGGTGGGGAGAGGGAGGGGGAGGAAGAGGAGGAGGAATGGGGGAGTGGGG
GGCTTCACGGCGAATTTAAAAGAGAAGAAGGATTTCGGGAATCCGGAGTT
GTTGCAACGGATCATCGAGGTGTTTGGGATCGACGAGTGGGCTTCCAATT
ACCCTCCTCATCTCTTCTCGCCCCATGCCTACGAAGAGGGGGATTACATG
GAGAGGATACGAAGCACCCAGCGACAGCTGGAAATAAGCATGCTACAGCA
ACAAGCTGCTGTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TTACCGCCTCCAGCACGGACACCACCCGTCCTCCCCTTCCTCCTCCTCCT
TTCTCCTCCTCCTCCTCCACTTCCTCCTCCTCCTTGCACCAACAGCACGT
ATCTCTGCGAGCGCGGGAAGGGAGGGAGGGACCGCCCGCGGTCGCGCGTG
TCGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGGAGGAGGAGGC
ATACCTACACCTCCTCTGTCTTGGCCCCTCCCAGGCCCTCCCTCCCTTCC
GCCCTCCTCCTCTTCCTCCTCCACGGCCTCGGTGGCCGTGCGAGCCGCAC
TGGCACTCACGCAAAAAGTCCAACAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGGCGCTTGCTTTCGGGGCCAGGAAGGGAGGGAGGGAGGG
GGGGAAGGTACTGCCGCAGCTGCAGGAGCAGCAGCAGACACAGCAGCAGC
AGCAGCAGTTCCAAGAGGCCAAAAAACAGGCAGAGCAAGTGGCTTCACGA
CTGGCACGGATGGGAGGGAGGGAGGGAGGGGTAGGGGGGAAGCCACCGTC
GCCTGGCGTGGATGAGCGGGGAAAGAAGCGGAGTCGATTCACCGACTAG
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Synonyms
Publications