NO22G00470.1, NO22G00470.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO22G00470.1
Unique NameNO22G00470.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1486
Alignment locationchr22:162265..163750 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr22genomechr22:162265..163750 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO22G00470.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00470NO22G00470Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO22G00470.1NO22G00470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO22G00470.1.cds1NO22G00470.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO22G00470.1 ID=NO22G00470.1|Name=NO22G00470.1|organism=Nannochloropsis oceanica|type=mRNA|length=1486bp
ATGGCGGTGTGGGCGGAGGGCTTGAAGGAGGAAGGGCAGTGGCCGCAAGC
ACTGGTGGTGTTTTTGGCAATGGTCAGGAGGAAGGGAGCGAGGAAGGGAG
CGAGGGAAGGAGGGGCATGGTTGTTGAAGGCTGCGGAGTGTGCGAGGTCT
CTGGGTGATTGGCGGTTGGCATTGACGCTGGTCGCACGTGTGGAGGAGGA
GGAGGGAGGGAGGGAGGGAGGGAGGGGAGGAGGGGGGGGAGGAGGAACTG
AAAGCATTAGTGATGGGAAGGTGGCACTGTCCCTTTCCCGTCCTCCCCCT
CCTTCTCTTGTCCAGACCTGGGCTCGCCATTTTGTGGCGTTTTTTTTGGG
AGGGGTGGAAGGAGGGAGGGAGGGGAAAGAACGCCTGAAAGAGGGGGCGC
GCGTGTGTTTGGAGTACTTGAATGACGTGGAGGGAGGGGTGGCTGCGTTG
GTCAAAGCGGGAGAATGGAAGGAGGCGATGCGGGAGGCAAGGAAGGGAGG
GAGGAAGGATATGATCGAAACCGACGTCTGGGCTGGTGTGAAGGAGGGGG
AGGAGGAGATGAAGGGATGGATCAAGGGAGGGAAGGAGAGATGGAAGGAG
GGAGGGGAGGAGTTGAGAGTGTTGGCGGGGAAGATTGAGAGGGAGGAGAA
GGAGAAGGAGGAGGCGGAGAGGGAGAGGAGGCGGAGGGTGGGATTGGAGG
GAGGAGGAAAGGAGGGTGAGGAAGGGAGTGTGTTTTCGGCTATGACGAAT
GAGACGATGACCAGTGTCGTCACTGATGCCTCCTTCCGCTCAGGTACATC
CTCGCATGCCTCCTCCCACTCACGGCTAACCTGGACACTACCCGGAAGTA
TCAGAAGTAGCAGCAGCAGCAGCAGCAGGTACAACAGCAGTGGCACCAGC
ACCGTTGGCTTCGGCGTAGCGTCTCAAATGGGGGGGGAGGGCGGGGGGGA
GGGAGGGTTACAGGACCGCCAACAGCAGCAGCAACGGCGAACGAAGAAGG
CCAAGAGGAAGATCAAACTGACGTTACGGGAGGAGGAGGAGAGGCTGAGG
AATGCGTTGCTGGGTCGTCGGCCCGGGGAAAAAGAGATGGAAGAGGTGAG
GGACCTTGTGGATGCGCTGCTGTTACTAAATGACATGAAGGCAGCGGGCA
CATTGGTGTGTCTTCTGAGTGCGTATGTGCAGGAGATTGCGGCCCATCCT
CTTCCTCCTCCTCCACCCCCGGTGGGGGCCAAAACAGAGGTGGAGGGAGG
AAAGGAGGGGGAGGGAGTGGGGGAAGGCGGGGGGGAGGAAGGCTTGATGG
GCCTGTTTGACAAGATATTCGCGGCTTATCGTTTTTTAGAGGGGTAAAGA
AGGGAGGGAGCAAGGTGGAGGGAGGAAGGTGGGTAGAGGAAGCAGTGAAT
GAAATGAAACATGAAGTATTATGACGGGCAATACGACCAAATAAATTAAA
TTCTGGTGAATCCAAAGGAACCAAAAGAATGCCGAT
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protein sequence of NO22G00470.1

>NO22G00470.1-protein ID=NO22G00470.1-protein|Name=NO22G00470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bp
MAVWAEGLKEEGQWPQALVVFLAMVRRKGARKGAREGGAWLLKAAECARS
LGDWRLALTLVARVEEEEGGREGGRGGGGGGGTESISDGKVALSLSRPPP
PSLVQTWARHFVAFFLGGVEGGREGKERLKEGARVCLEYLNDVEGGVAAL
VKAGEWKEAMREARKGGRKDMIETDVWAGVKEGEEEMKGWIKGGKERWKE
GGEELRVLAGKIEREEKEKEEAERERRRRVGLEGGGKEGEEGSVFSAMTN
ETMTSVVTDASFRSGTSSHASSHSRLTWTLPGSIRSSSSSSSRYNSSGTS
TVGFGVASQMGGEGGGEGGLQDRQQQQQRRTKKAKRKIKLTLREEEERLR
NALLGRRPGEKEMEEVRDLVDALLLLNDMKAAGTLVCLLSAYVQEIAAHP
LPPPPPPVGAKTEVEGGKEGEGVGEGGGEEGLMGLFDKIFAAYRFLEG*
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mRNA from alignment at chr22:162265..163750-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO22G00470.1 ID=NO22G00470.1|Name=NO22G00470.1|organism=Nannochloropsis oceanica|type=mRNA|length=1486bp|location=Sequence derived from alignment at chr22:162265..163750- (Nannochloropsis oceanica)
ATGGCGGTGTGGGCGGAGGGCTTGAAGGAGGAAGGGCAGTGGCCGCAAGC
ACTGGTGGTGTTTTTGGCAATGGTCAGGAGGAAGGGAGCGAGGAAGGGAG
CGAGGGAAGGAGGGGCATGGTTGTTGAAGGCTGCGGAGTGTGCGAGGTCT
CTGGGTGATTGGCGGTTGGCATTGACGCTGGTCGCACGTGTGGAGGAGGA
GGAGGGAGGGAGGGAGGGAGGGAGGGGAGGAGGGGGGGGAGGAGGAACTG
AAAGCATTAGTGATGGGAAGGTGGCACTGTCCCTTTCCCGTCCTCCCCCT
CCTTCTCTTGTCCAGACCTGGGCTCGCCATTTTGTGGCGTTTTTTTTGGG
AGGGGTGGAAGGAGGGAGGGAGGGGAAAGAACGCCTGAAAGAGGGGGCGC
GCGTGTGTTTGGAGTACTTGAATGACGTGGAGGGAGGGGTGGCTGCGTTG
GTCAAAGCGGGAGAATGGAAGGAGGCGATGCGGGAGGCAAGGAAGGGAGG
GAGGAAGGATATGATCGAAACCGACGTCTGGGCTGGTGTGAAGGAGGGGG
AGGAGGAGATGAAGGGATGGATCAAGGGAGGGAAGGAGAGATGGAAGGAG
GGAGGGGAGGAGTTGAGAGTGTTGGCGGGGAAGATTGAGAGGGAGGAGAA
GGAGAAGGAGGAGGCGGAGAGGGAGAGGAGGCGGAGGGTGGGATTGGAGG
GAGGAGGAAAGGAGGGTGAGGAAGGGAGTGTGTTTTCGGCTATGACGAAT
GAGACGATGACCAGTGTCGTCACTGATGCCTCCTTCCGCTCAGGTACATC
CTCGCATGCCTCCTCCCACTCACGGCTAACCTGGACACTACCCGGAAGTA
TCAGAAGTAGCAGCAGCAGCAGCAGCAGGTACAACAGCAGTGGCACCAGC
ACCGTTGGCTTCGGCGTAGCGTCTCAAATGGGGGGGGAGGGCGGGGGGGA
GGGAGGGTTACAGGACCGCCAACAGCAGCAGCAACGGCGAACGAAGAAGG
CCAAGAGGAAGATCAAACTGACGTTACGGGAGGAGGAGGAGAGGCTGAGG
AATGCGTTGCTGGGTCGTCGGCCCGGGGAAAAAGAGATGGAAGAGGTGAG
GGACCTTGTGGATGCGCTGCTGTTACTAAATGACATGAAGGCAGCGGGCA
CATTGGTGTGTCTTCTGAGTGCGTATGTGCAGGAGATTGCGGCCCATCCT
CTTCCTCCTCCTCCACCCCCGGTGGGGGCCAAAACAGAGGTGGAGGGAGG
AAAGGAGGGGGAGGGAGTGGGGGAAGGCGGGGGGGAGGAAGGCTTGATGG
GCCTGTTTGACAAGATATTCGCGGCTTATCGTTTTTTAGAGGGGTAAAGA
AGGGAGGGAGCAAGGTGGAGGGAGGAAGGTGGGTAGAGGAAGCAGTGAAT
GAAATGAAACATGAAGTATTATGACGGGCAATACGACCAAATAAATTAAA
TTCTGGTGAATCCAAAGGAACCAAAAGAATGCCGAT
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Coding sequence (CDS) from alignment at chr22:162265..163750-

>NO22G00470.1 ID=NO22G00470.1|Name=NO22G00470.1|organism=Nannochloropsis oceanica|type=CDS|length=1347bp|location=Sequence derived from alignment at chr22:162265..163750- (Nannochloropsis oceanica)
ATGGCGGTGTGGGCGGAGGGCTTGAAGGAGGAAGGGCAGTGGCCGCAAGC
ACTGGTGGTGTTTTTGGCAATGGTCAGGAGGAAGGGAGCGAGGAAGGGAG
CGAGGGAAGGAGGGGCATGGTTGTTGAAGGCTGCGGAGTGTGCGAGGTCT
CTGGGTGATTGGCGGTTGGCATTGACGCTGGTCGCACGTGTGGAGGAGGA
GGAGGGAGGGAGGGAGGGAGGGAGGGGAGGAGGGGGGGGAGGAGGAACTG
AAAGCATTAGTGATGGGAAGGTGGCACTGTCCCTTTCCCGTCCTCCCCCT
CCTTCTCTTGTCCAGACCTGGGCTCGCCATTTTGTGGCGTTTTTTTTGGG
AGGGGTGGAAGGAGGGAGGGAGGGGAAAGAACGCCTGAAAGAGGGGGCGC
GCGTGTGTTTGGAGTACTTGAATGACGTGGAGGGAGGGGTGGCTGCGTTG
GTCAAAGCGGGAGAATGGAAGGAGGCGATGCGGGAGGCAAGGAAGGGAGG
GAGGAAGGATATGATCGAAACCGACGTCTGGGCTGGTGTGAAGGAGGGGG
AGGAGGAGATGAAGGGATGGATCAAGGGAGGGAAGGAGAGATGGAAGGAG
GGAGGGGAGGAGTTGAGAGTGTTGGCGGGGAAGATTGAGAGGGAGGAGAA
GGAGAAGGAGGAGGCGGAGAGGGAGAGGAGGCGGAGGGTGGGATTGGAGG
GAGGAGGAAAGGAGGGTGAGGAAGGGAGTGTGTTTTCGGCTATGACGAAT
GAGACGATGACCAGTGTCGTCACTGATGCCTCCTTCCGCTCAGGTACATC
CTCGCATGCCTCCTCCCACTCACGGCTAACCTGGACACTACCCGGAAGTA
TCAGAAGTAGCAGCAGCAGCAGCAGCAGGTACAACAGCAGTGGCACCAGC
ACCGTTGGCTTCGGCGTAGCGTCTCAAATGGGGGGGGAGGGCGGGGGGGA
GGGAGGGTTACAGGACCGCCAACAGCAGCAGCAACGGCGAACGAAGAAGG
CCAAGAGGAAGATCAAACTGACGTTACGGGAGGAGGAGGAGAGGCTGAGG
AATGCGTTGCTGGGTCGTCGGCCCGGGGAAAAAGAGATGGAAGAGGTGAG
GGACCTTGTGGATGCGCTGCTGTTACTAAATGACATGAAGGCAGCGGGCA
CATTGGTGTGTCTTCTGAGTGCGTATGTGCAGGAGATTGCGGCCCATCCT
CTTCCTCCTCCTCCACCCCCGGTGGGGGCCAAAACAGAGGTGGAGGGAGG
AAAGGAGGGGGAGGGAGTGGGGGAAGGCGGGGGGGAGGAAGGCTTGATGG
GCCTGTTTGACAAGATATTCGCGGCTTATCGTTTTTTAGAGGGGTAA
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Synonyms
Publications