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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr22 | genome | chr22:146818..148515 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO22G00380.1 ID=NO22G00380.1|Name=NO22G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=1227bp
AAAACACACAGGGGGGAAGGCAAGGAGGCAGATTCTCGCTTTTAATCGGG
CAGGGAGGGACACGTCGTTGCAGCCCAGCCTCCTCACCCTTCGCTCCTTG
CTTCTTTCTCTCCACCAGAGGGGAGCAAGAGAAGCATCCCATCCCCCTCG
TCCCACCACACACACGCCGCTGTCGCCGCAGTTGTTGCTGTTACACGCTA
AACAGCAGCAGCAGCAGCTGCAGCAGCAGCCGTAGCGGAGGGCAACCATG
GCATCTCCGAAAAGAATGGCCTTGTCGATCCATGACTCGGTGCGACTGAC
AACAGTCAAGGGCGAGATAGTGCAAGGAAGTGTGCACGCGCTAGACGAGA
CCACAAGTACACTAGTGCTGCGTCTGGGAGATGACTCAACACTTTCCTCC
ACCTCCTCCGCCAACGCTGCTGCTCGCGTCAGGGCGGGGAACGGTGGGGG
TCACTTCCTTCGTTTCTTGAGTGTCAAAAGCATCAGGACGATCGAGGTGG
GAGGTGCCCACAGAGGGAAAAAAAAGGGAGCAGCAGCAGGGGTGACTGGT
GAAGAGTCCTCTTCCGCCGCAACAGCTGCAGCTGCAGGGAGAGGGAGCGG
GGGAGGGATCAACGACGAAAAGCTGGCGAAGCTGGAGAAGGAGTCCAGGG
GTAAGGCGGCGAGGGAAATGGCCAAGATCAATCCATCGGCAAGTCCCCAG
GGGCAGATGAGCTTCGACCACATCAGCAAAATCTACTCAGACACGCGCTG
GAGCGGTCAGAGCATCTTAATCATGGATCAAGTGCGCATCGACCCCCCCT
ATCACAACAAGGGAGACATCAAGACACTCGACGCTTCCGTGAAGAGTGAG
TTTATCGATCGCCTGCTCACCATGATGGAGAACGCGGATAAGAAGCTGGC
AAGGAAGTAGGGAGGGAGGGAGGGACGGAGGGGTGTGCTGCATATTCCTG
GACATTGGCCACTAGGGCGATGAGTGATTGAGCGGGAGGAAAAGGATGAA
GCGAAGGAGATAGAGAGAGATCCAGATGGAGTGTTGTATGTACATGTTCT
GTTACTGTGGAGGATGGTTGAAATCGGGGAGATGGAAGGGAGGAAGGGAT
GAAGGGAGGGGCGAGGGGAAGAAGAGGAGGTGAGAGGTGTGGTGAGGCAC
ATGTGGTGAAAGGAGAGCGCACCAATAAAAGGCGGCATTTAACGAAACAA
GAAAACAACAAAGCTGATCGCACGACC back to topprotein sequence of NO22G00380.1 >NO22G00380.1-protein ID=NO22G00380.1-protein|Name=NO22G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MASPKRMALSIHDSVRLTTVKGEIVQGSVHALDETTSTLVLRLGDDSTLS
STSSANAAARVRAGNGGGHFLRFLSVKSIRTIEVGGAHRGKKKGAAAGVT
GEESSSAATAAAAGRGSGGGINDEKLAKLEKESRGKAAREMAKINPSASP
QGQMSFDHISKIYSDTRWSGQSILIMDQVRIDPPYHNKGDIKTLDASVKS
EFIDRLLTMMENADKKLARK* back to topmRNA from alignment at chr22:146818..148515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO22G00380.1 ID=NO22G00380.1|Name=NO22G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=1698bp|location=Sequence derived from alignment at chr22:146818..148515- (Nannochloropsis oceanica)
AAAACACACAGGGGGGAAGGCAAGGAGGCAGATTCTCGCTTTTAATCGGG
CAGGGAGGGACACGTCGTTGCAGCCCAGCCTCCTCACCCTTCGCTCCTTG
CTTCTTTCTCTCCACCAGAGGGGAGCAAGAGAAGCATCCCATCCCCCTCG
TCCCACCACACACACGCCGCTGTCGCCGCAGTTGTTGCTGTTACACGCTA
AACAGCAGCAGCAGCAGCTGCAGCAGCAGCCGTAGCGGAGGGCAACCATG
GCATCTCCGAAAAGAATGGCCTTGTCGATCCATGACTCGGTGCGACTGAC
AACAGTCAAGGGCGAGATAGTGCAAGGAAGTGTGCACGCGCTAGACGAGA
CCACAAGTACACTAGTGCTGCGTCTGGGAGGTAAGTAGGGAAGAAGAGAG
AAAAGGAGGGGGGGTGCTGTCCTTGGGGCGTGAGTGCATGCCCCTCAAAA
TTTACTCTCCCTCCTTCCCTCCCTGTCCATCACCCTCTCCATCCTCTGTC
CACGCCGCTTGTTGTCTGACGACGGGTAACTGCGGGATACCCCCACCTCG
CTGCTTGAGCTGCATCCTCACCTATCCCCCCTCCCTCGCCCTTCCATCTT
CTTTCTGACACAGATGACTCAACACTTTCCTCCACCTCCTCCGCCAACGC
TGCTGCTCGCGTCAGGGCGGGGAACGGTGGGGGTCACTTCCTTCGTTTCT
TGAGTGTCAAAAGCATCAGGACGATCGAGGTGGGAGGTGCCCACAGAGGG
AAAAAAAAGGGAGCAGCAGCAGGGGTGACTGGTGAAGAGTCCTCTTCCGC
CGCAACAGCTGCAGCTGCAGGGAGAGGGAGCGGGGGAGGGATCAACGACG
AAAAGCTGGCGAAGCTGGAGAAGGAGTCCAGGGGTAAGGCGGCGAGGGAA
ATGGCCAAGATCAATCCATCGGCAAGTCCCCAGGGGCAGATGAGCTTCGA
CCACATCAGCAAAATGTGCGCAAAGGGGGAGGGAGGGAGGCAGGGAGGGA
GGCAGGAGGAATTTGGTTATGGTACGGGTTATACATCGGCGAATCTGGAG
GGACAGGAAAGCTTTGACCACGCAAGTAAAACGCATATGTCTTCCCTTCC
TCTTTTCCCTTCCCGTCTTCCTTCCTTCTAATCCCTTTCTTTCCTTTTCC
ATGCACTGACCCTCCCTCCCTCCCTCTTTCCCTCCCTCGCTCCCTTACGT
CAGCTACTCAGACACGCGCTGGAGCGGTCAGAGCATCTTAATCATGGATC
AAGTGCGCATCGACCCCCCCTATCACAACAAGGGAGACATCAAGACACTC
GACGCTTCCGTGAAGAGTGAGTTTATCGATCGCCTGCTCACCATGATGGA
GAACGCGGATAAGAAGCTGGCAAGGAAGTAGGGAGGGAGGGAGGGACGGA
GGGGTGTGCTGCATATTCCTGGACATTGGCCACTAGGGCGATGAGTGATT
GAGCGGGAGGAAAAGGATGAAGCGAAGGAGATAGAGAGAGATCCAGATGG
AGTGTTGTATGTACATGTTCTGTTACTGTGGAGGATGGTTGAAATCGGGG
AGATGGAAGGGAGGAAGGGATGAAGGGAGGGGCGAGGGGAAGAAGAGGAG
GTGAGAGGTGTGGTGAGGCACATGTGGTGAAAGGAGAGCGCACCAATAAA
AGGCGGCATTTAACGAAACAAGAAAACAACAAAGCTGATCGCACGACC back to topCoding sequence (CDS) from alignment at chr22:146818..148515- >NO22G00380.1 ID=NO22G00380.1|Name=NO22G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=663bp|location=Sequence derived from alignment at chr22:146818..148515- (Nannochloropsis oceanica)
ATGGCATCTCCGAAAAGAATGGCCTTGTCGATCCATGACTCGGTGCGACT
GACAACAGTCAAGGGCGAGATAGTGCAAGGAAGTGTGCACGCGCTAGACG
AGACCACAAGTACACTAGTGCTGCGTCTGGGAGATGACTCAACACTTTCC
TCCACCTCCTCCGCCAACGCTGCTGCTCGCGTCAGGGCGGGGAACGGTGG
GGGTCACTTCCTTCGTTTCTTGAGTGTCAAAAGCATCAGGACGATCGAGG
TGGGAGGTGCCCACAGAGGGAAAAAAAAGGGAGCAGCAGCAGGGGTGACT
GGTGAAGAGTCCTCTTCCGCCGCAACAGCTGCAGCTGCAGGGAGAGGGAG
CGGGGGAGGGATCAACGACGAAAAGCTGGCGAAGCTGGAGAAGGAGTCCA
GGGGTAAGGCGGCGAGGGAAATGGCCAAGATCAATCCATCGGCAAGTCCC
CAGGGGCAGATGAGCTTCGACCACATCAGCAAAATCTACTCAGACACGCG
CTGGAGCGGTCAGAGCATCTTAATCATGGATCAAGTGCGCATCGACCCCC
CCTATCACAACAAGGGAGACATCAAGACACTCGACGCTTCCGTGAAGAGT
GAGTTTATCGATCGCCTGCTCACCATGATGGAGAACGCGGATAAGAAGCT
GGCAAGGAAGTAG back to top
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