NO21G00530.1, NO21G00530.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO21G00530.1
Unique Name	NO21G00530.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3498
Alignment location	chr21:183594..187309 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr21	genome	chr21:183594..187309 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO21G00530.1 vs.
Match: EWM22552.1 (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 257.3 bits (656), Expect = 1.900e-64
Identity = 233/580 (40.17%), Postives = 291/580 (50.17%), Query Frame = 0

Query:   29 SSSSVPATPT-----PPTPTPAAAPGLTTPSSSSTHNRGHIPRRSSRGSSVQTKATASSLQKRRSIVHTQTLTPGGSSAFKGSVLPVSHPHTPESAGKDLLSSSSPHLSNFPASGLSKTRPLSISSPGQARAHDHGPSPPSSSSSSSSSIAARQVKPQLQAAAFAVAPSTLDLSSLPSSTFTSTSTTTSSSSSAKLVVISAEEKAMDGAPQGTVYQVKVQTTEECRPSLNPSLDLKLVLDTLTEAQARSNPHSLPSSYPSSSSVTTTAALGAGGAGGRREVGSAAGGGGGGGGGGDKAILDWAHEYECIDAVRRLCHHPSLGPSLLQPHLPLLLPFLIRSVQNLRSSMQRNALLALRELFNPACLGPAFPPFLGTLCAALLKKLSHGDKKFICQACEDVLEAAIEGGGGATVPFLLPALLPLVKDRNPEMAAASLVWIEKALMKALEGEREERKEDGGLAALMGGMTSVAISSINNTSNHSSSSSTPPLLPPGPIDTSLPSPSSLPSFLHTPDPPLLPSLLQSLGLGYDRCRLALGKKAAKRSLLLLRAQMDAGTEEREGGGGGEKERESPGKVGGKEGG 604
            SS+  P+ PT     P  P P  +P   TPS S T             S+V    T  +L+          +    ++  +G  LP      P S+   L S +SP  S   A       P+S       +   H P+   S S+SSS        P    A     P      + PSS+  S+S   SS+++ KLVV+SA EKAMDGAPQG VYQV+V+ TE+  PSL+P+LDL LVL+T+ E  A  +                      GG  G  E G A                DWA EYECIDA+RRL  HPSLGP+LL+PHLPLLLPFL+RSV NLRSSMQRNALL LRELF PA LGPAFPPFL  +CA LL++L HGDKKFI  ACE VL AA+   GGATVPFLLPALLP+VK +  E AA SL+WIE+ L + L+    +   +GG A   GG  S    ++   S          L  P P     P PS+ PS   +P PP LPSLL        R       +   R    LR Q+  G  +  G  G +   +  G+ GG+ GG
Sbjct:  195 SSTLPPSPPTLGGHGPRVPIPGPSPHEVTPSVSIT-------------STVLPSPTPHALKGSTKTASPTAMPAVTNTPVRGHQLPP----LPSSSPGALPSLASPSRSILSA-------PISARRAYHRKIDQHLPAGTDSPSTSSSL----GTSPNTSVAPGRRKPGPPRPHATPSSSSLSSS---SSTATTKLVVMSAAEKAMDGAPQGRVYQVQVRNTEDLPPSLHPALDLDLVLETVKEGDAALH----------------------GGQRGEEERGHA----------------DWAREYECIDAIRRLALHPSLGPALLRPHLPLLLPFLLRSVHNLRSSMQRNALLCLRELFVPAGLGPAFPPFLEPMCALLLRQLGHGDKKFIRVACEGVLAAAVGAEGGATVPFLLPALLPMVKAKKAEEAAGSLLWIEQGLKEVLKEGGADGGREGGRAE--GGEESTLTRALGALS----------LTSPTP-----PRPSTPPS---SPLPPALPSLLPP-----PRGERTDAARPPPRVGPRLR-QLSFGDRQESGEEGADSPEQVLGQGGGRAGG 679

The following BLAST results are available for this feature:

BLAST of NO21G00530.1 vs.

BLAST of NO21G00530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22552.1	1.900e-64	40.17	Armadillo-like helical [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO21G00530	NO21G00530	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00530.1	NO21G00530.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO21G00530.1.cds1	NO21G00530.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO21G00530.1.cds2	NO21G00530.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr21:183594..187309+
coding sequence from alignment at chr21:183594..187309+

mRNA sequence

>NO21G00530.1 ID=NO21G00530.1|Name=NO21G00530.1|organism=Nannochloropsis oceanica|type=mRNA|length=3498bp
ATGGCTACCCCTGGCGGAAGCGGTAGTTGCACTGGAAGCGGCGGCATATA
TCGCATGCCTGCAAGTCGTGGCATGCCATCACCCTCCTCCTCGTCAGTGC
CCGCGACGCCCACGCCCCCCACTCCTACTCCTGCTGCTGCTCCTGGACTC
ACCACTCCCTCCTCTTCGTCAACCCATAATCGCGGCCACATTCCTCGTCG
CTCTTCGAGAGGAAGCAGCGTCCAAACAAAGGCCACCGCCAGCAGCCTGC
AAAAACGTCGCAGCATTGTGCACACCCAAACACTGACCCCCGGCGGAAGC
AGCGCCTTCAAAGGCAGCGTCCTCCCTGTCTCCCACCCACACACCCCGGA
AAGCGCCGGAAAGGACTTGCTGTCCTCGTCTTCTCCCCATTTATCCAATT
TTCCTGCCTCGGGATTGTCAAAGACACGTCCCTTGTCGATTTCATCCCCA
GGGCAGGCCCGCGCCCACGACCACGGACCCTCCCCCCCTTCCTCCTCCTC
TTCATCCTCCTCATCTATCGCGGCTCGCCAGGTGAAGCCCCAGCTTCAAG
CGGCCGCCTTCGCCGTCGCCCCCTCCACCCTCGACCTTTCCTCCCTCCCT
TCCTCCACCTTCACCTCCACCTCCACCACAACTTCCTCCTCCTCCTCGGC
CAAGCTCGTCGTCATTTCCGCGGAAGAAAAGGCGATGGACGGCGCCCCCC
AAGGGACCGTGTACCAAGTGAAAGTCCAGACAACAGAGGAGTGCCGTCCC
TCCCTCAATCCATCCCTCGACCTGAAGCTGGTGCTGGATACCTTGACGGA
GGCACAGGCACGTTCCAATCCGCATTCCCTTCCTTCCTCCTACCCCTCCT
CGTCCTCTGTCACAACTACTGCGGCTCTTGGAGCAGGAGGTGCAGGGGGC
AGAAGGGAAGTAGGGTCTGCTGCTGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGACAAAGCAATCTTAGACTGGGCCCATGAATACGAATGCATCGACG
CCGTCCGCCGCCTGTGCCACCACCCCTCCCTCGGCCCCTCCCTCCTTCAG
CCCCACCTCCCCCTCCTCCTCCCCTTCCTTATCCGCTCCGTTCAGAACCT
ACGTTCAAGTATGCAGCGGAACGCCCTCCTCGCCCTCCGGGAGCTCTTCA
ACCCTGCCTGCCTCGGGCCTGCCTTCCCCCCCTTTCTCGGCACTCTCTGT
GCGGCCCTCCTCAAAAAGCTGTCGCATGGAGACAAGAAATTCATCTGCCA
AGCTTGTGAGGATGTGTTGGAGGCAGCGATCGAAGGAGGGGGAGGAGCCA
CCGTGCCCTTCCTCCTTCCCGCCCTCCTCCCTCTGGTCAAGGACCGCAAT
CCGGAGATGGCCGCGGCGAGCCTGGTATGGATTGAGAAGGCTCTTATGAA
AGCTTTGGAGGGAGAAAGGGAGGAAAGGAAGGAAGACGGTGGCCTGGCAG
CGTTGATGGGTGGGATGACCTCCGTCGCTATCAGTAGCATCAATAACACC
AGCAACCACAGCAGCAGCAGTAGCACCCCTCCTCTCCTCCCCCCCGGGCC
AATCGACACCTCCCTCCCCTCCCCTTCCTCCCTCCCCTCCTTTCTCCATA
CTCCTGACCCCCCCCTCCTTCCCTCCCTCCTTCAATCTCTCGGCCTGGGG
TATGACCGCTGCAGGTTGGCTCTCGGGAAGAAGGCCGCCAAGCGTTCTCT
TCTCCTCCTGCGCGCACAGATGGATGCTGGAACGGAGGAGCGCGAGGGAG
GGGGGGGAGGCGAGAAAGAGAGAGAGTCTCCGGGAAAGGTGGGAGGGAAG
GAGGGAGGGTTGTTTGAGAAGGCACTGCGGGCGACGACCTTGACTAAGGG
AGTAGTGGAGGACATTCTGAGGCATACGTCCGATGCCGCGACGAAGCGGA
AATCCCTCTCTGTGGTGTCCACCCCTGCTTCCTCCCCCTCGTCCTCGTCC
TCGTCCTCGTCCTCGTCCGTCTCGTCGGCCTTTTCCACGATTGGCTCGTC
AACATCTTCTTCTACTACTTTTTCTTCCTCTTCTACATCCACAGCCACTT
CGTTTCGGAGGACGACGGGTGTGGAGGTGAGTGCGCGGGGAGGGAGGGCA
GGTGGAATGTGTGGAGGGAGGGAAGGAGGGAACAGTGCTACGCGGACAAC
ATCGGCCTTTCGGCAGCATGTAGCGGTGATGAAGAGAGGGGGAGGAGGAG
GAGGAGGAGGAGGGAGGGGAGAAGGGATGATCAGTCATCGCAGGCCTCCC
TTCTCTTCTTCTTTGTCGTCTTCGTCTGTTGTAGTGGCTTTACCGCCACC
AGCGGTCAGGAAGGGAGAGAGGGAAGGAGGAGTATTGGTTGGGAACGATG
ATAGCAGCGTGAGTCGCCCCACCATCAGAAGCAACAGCAGGGTCGTTGCT
ACCACTGCCAGCAGCAGCACGACGCCGGACGTCAAGAGCAAAGAGGAGGA
AGGGGAGAAGATTTTGTTGGCCAAAACAAGAGAACGAACAGGACCAGCAG
CAGCGGCAGGAAGACGAACAGCTGCAGCAACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCGGCGGCAGCCACCGTCGCAGCAGCAGCAGTAACAGG
AGCTGGCGCTTCTGCGACTGCGAGGAGAGGGGGAGTGAGGGAGGGAGGGA
AGGAGAAGAGCACTCCGTCCACGCTTTCCAGCAAGACAATTAGCTTGAAA
GAGGCCCAGGAAAGGGGAGAGGAAATGAAAAAGGCGAAGGAATGTGGAAA
CGAAGAGAAAGAGAGGGTGGAAGAAGGGGAAAAGAGAGAGATTTCTGCTA
TTGGGTCGTCTCTTGGAGTGGGGGAAATGACGAGTGTCGTGTGATTCGAG
GAGGGAGGGAGAAAGCGGTGTGCATTCGTAGAGGCATCTAGAGGATGCTT
TTATTTGACAACCATAGAGAGAAAATAGTCGAGAAAGTGAACAGACAGAA
GGAAAGAAGACGAAGAACAAGGACAGGCACAATAGCAGGCACAGGAACAA
CAAGATGAAGGGAAAGAAGAGGAAAAACAAGAAGAACAAGAAATAGAACG
AAAAGAAAGGTGAATTGTATTGAAGAACAAGGAAGTGGAATCGCCGCAGA
GGATGAGAGAGGCAGAGAGGGAGGGAGGGCGAGGACGTTTGCATGTGTCG
TGGTCCACTGGGCATAGTAATATGTTGATCGCAACGCCCGCGGTAACTAA
GAGAGAAATTGGGTGGCCTCTGCCTGTGTGCCCCCCCTTGTGGTGCATAT
TTTCCCCGTTTCCCCTTAGCAGGATGACATCGAGGGAGGGAGGTTGGACG
TCTTGCAGAGAAGAAAATAGGCATGTTAATGCGACCGGCGCATGGCACAA
CAAACGCAAGATGTCACCTGCCCCCGCGACAGGGCCAAGCTAAGACGAGA
GAGAGTGGACGCAAAAGAGGTTAGATGGTCAACATACGAAGTAAAAATAT
AGGAAGGAGAAAGTAAAGCACAAAGCACGCTGCAGAGACACAAACATT

protein sequence of NO21G00530.1

>NO21G00530.1-protein ID=NO21G00530.1-protein|Name=NO21G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=948bp
MATPGGSGSCTGSGGIYRMPASRGMPSPSSSSVPATPTPPTPTPAAAPGL
TTPSSSSTHNRGHIPRRSSRGSSVQTKATASSLQKRRSIVHTQTLTPGGS
SAFKGSVLPVSHPHTPESAGKDLLSSSSPHLSNFPASGLSKTRPLSISSP
GQARAHDHGPSPPSSSSSSSSSIAARQVKPQLQAAAFAVAPSTLDLSSLP
SSTFTSTSTTTSSSSSAKLVVISAEEKAMDGAPQGTVYQVKVQTTEECRP
SLNPSLDLKLVLDTLTEAQARSNPHSLPSSYPSSSSVTTTAALGAGGAGG
RREVGSAAGGGGGGGGGGDKAILDWAHEYECIDAVRRLCHHPSLGPSLLQ
PHLPLLLPFLIRSVQNLRSSMQRNALLALRELFNPACLGPAFPPFLGTLC
AALLKKLSHGDKKFICQACEDVLEAAIEGGGGATVPFLLPALLPLVKDRN
PEMAAASLVWIEKALMKALEGEREERKEDGGLAALMGGMTSVAISSINNT
SNHSSSSSTPPLLPPGPIDTSLPSPSSLPSFLHTPDPPLLPSLLQSLGLG
YDRCRLALGKKAAKRSLLLLRAQMDAGTEEREGGGGGEKERESPGKVGGK
EGGLFEKALRATTLTKGVVEDILRHTSDAATKRKSLSVVSTPASSPSSSS
SSSSSSVSSAFSTIGSSTSSSTTFSSSSTSTATSFRRTTGVEVSARGGRA
GGMCGGREGGNSATRTTSAFRQHVAVMKRGGGGGGGGGRGEGMISHRRPP
FSSSLSSSSVVVALPPPAVRKGEREGGVLVGNDDSSVSRPTIRSNSRVVA
TTASSSTTPDVKSKEEEGEKILLAKTRERTGPAAAAGRRTAAATAAAAAA
AAAAAAAATVAAAAVTGAGASATARRGGVREGGKEKSTPSTLSSKTISLK
EAQERGEEMKKAKECGNEEKERVEEGEKREISAIGSSLGVGEMTSVV*

mRNA from alignment at chr21:183594..187309+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO21G00530.1 ID=NO21G00530.1|Name=NO21G00530.1|organism=Nannochloropsis oceanica|type=mRNA|length=3716bp|location=Sequence derived from alignment at chr21:183594..187309+ (Nannochloropsis oceanica)
ATGGCTACCCCTGGCGGAAGCGGTAGTTGCACTGGAAGCGGCGGCATATA
TCGCATGCCTGCAAGTCGTGGCATGCCATCACCCTCCTCCTCGTCAGTGC
CCGCGACGCCCACGCCCCCCACTCCTACTCCTGCTGCTGCTCCTGGACTC
ACCACTCCCTCCTCTTCGTCAACCCATAATCGCGGCCACATTCCTCGTCG
CTCTTCGAGAGGAAGCAGCGTCCAAACAAAGGCCACCGCCAGCAGCCTGC
AAAAACGTCGCAGCATTGTGCACACCCAAACACTGACCCCCGGCGGAAGC
AGCGCCTTCAAAGGCAGCGTCCTCCCTGTCTCCCACCCACACACCCCGGA
AAGCGCCGGAAAGGACTTGCTGTCCTCGTCTTCTCCCCATTTATCCAATT
TTCCTGCCTCGGGATTGTCAAAGACACGTCCCTTGTCGATTTCATCCCCA
GGGGTATTAATTTCCTCCTCCTCAACCACATCCTCCTCCTCCACTTCAAG
GCCTGGCATGAAGGCATCTTATTCTCCAGCAGTTCCTACCCCCCCCACCA
CCAGCACGAGGACGACAAGGACCCCGTCTGTACAAAAGCCGCTTTACTCG
CGGCATCCACAGCACGAGAAAGACCTCTCTCACATCCACCTGCCTAAGGA
CACGAATAGCACTTCTCACAGCAGGCCCGCGCCCACGACCACGGACCCTC
CCCCCCTTCCTCCTCCTCTTCATCCTCCTCATCTATCGCGGCTCGCCAGG
TGAAGCCCCAGCTTCAAGCGGCCGCCTTCGCCGTCGCCCCCTCCACCCTC
GACCTTTCCTCCCTCCCTTCCTCCACCTTCACCTCCACCTCCACCACAAC
TTCCTCCTCCTCCTCGGCCAAGCTCGTCGTCATTTCCGCGGAAGAAAAGG
CGATGGACGGCGCCCCCCAAGGGACCGTGTACCAAGTGAAAGTCCAGACA
ACAGAGGAGTGCCGTCCCTCCCTCAATCCATCCCTCGACCTGAAGCTGGT
GCTGGATACCTTGACGGAGGCACAGGCACGTTCCAATCCGCATTCCCTTC
CTTCCTCCTACCCCTCCTCGTCCTCTGTCACAACTACTGCGGCTCTTGGA
GCAGGAGGTGCAGGGGGCAGAAGGGAAGTAGGGTCTGCTGCTGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGACAAAGCAATCTTAGACTGGGCCCATG
AATACGAATGCATCGACGCCGTCCGCCGCCTGTGCCACCACCCCTCCCTC
GGCCCCTCCCTCCTTCAGCCCCACCTCCCCCTCCTCCTCCCCTTCCTTAT
CCGCTCCGTTCAGAACCTACGTTCAAGTATGCAGCGGAACGCCCTCCTCG
CCCTCCGGGAGCTCTTCAACCCTGCCTGCCTCGGGCCTGCCTTCCCCCCC
TTTCTCGGCACTCTCTGTGCGGCCCTCCTCAAAAAGCTGTCGCATGGAGA
CAAGAAATTCATCTGCCAAGCTTGTGAGGATGTGTTGGAGGCAGCGATCG
AAGGAGGGGGAGGAGCCACCGTGCCCTTCCTCCTTCCCGCCCTCCTCCCT
CTGGTCAAGGACCGCAATCCGGAGATGGCCGCGGCGAGCCTGGTATGGAT
TGAGAAGGCTCTTATGAAAGCTTTGGAGGGAGAAAGGGAGGAAAGGAAGG
AAGACGGTGGCCTGGCAGCGTTGATGGGTGGGATGACCTCCGTCGCTATC
AGTAGCATCAATAACACCAGCAACCACAGCAGCAGCAGTAGCACCCCTCC
TCTCCTCCCCCCCGGGCCAATCGACACCTCCCTCCCCTCCCCTTCCTCCC
TCCCCTCCTTTCTCCATACTCCTGACCCCCCCCTCCTTCCCTCCCTCCTT
CAATCTCTCGGCCTGGGGTATGACCGCTGCAGGTTGGCTCTCGGGAAGAA
GGCCGCCAAGCGTTCTCTTCTCCTCCTGCGCGCACAGATGGATGCTGGAA
CGGAGGAGCGCGAGGGAGGGGGGGGAGGCGAGAAAGAGAGAGAGTCTCCG
GGAAAGGTGGGAGGGAAGGAGGGAGGGTTGTTTGAGAAGGCACTGCGGGC
GACGACCTTGACTAAGGGAGTAGTGGAGGACATTCTGAGGCATACGTCCG
ATGCCGCGACGAAGCGGAAATCCCTCTCTGTGGTGTCCACCCCTGCTTCC
TCCCCCTCGTCCTCGTCCTCGTCCTCGTCCTCGTCCGTCTCGTCGGCCTT
TTCCACGATTGGCTCGTCAACATCTTCTTCTACTACTTTTTCTTCCTCTT
CTACATCCACAGCCACTTCGTTTCGGAGGACGACGGGTGTGGAGGTGAGT
GCGCGGGGAGGGAGGGCAGGTGGAATGTGTGGAGGGAGGGAAGGAGGGAA
CAGTGCTACGCGGACAACATCGGCCTTTCGGCAGCATGTAGCGGTGATGA
AGAGAGGGGGAGGAGGAGGAGGAGGAGGAGGGAGGGGAGAAGGGATGATC
AGTCATCGCAGGCCTCCCTTCTCTTCTTCTTTGTCGTCTTCGTCTGTTGT
AGTGGCTTTACCGCCACCAGCGGTCAGGAAGGGAGAGAGGGAAGGAGGAG
TATTGGTTGGGAACGATGATAGCAGCGTGAGTCGCCCCACCATCAGAAGC
AACAGCAGGGTCGTTGCTACCACTGCCAGCAGCAGCACGACGCCGGACGT
CAAGAGCAAAGAGGAGGAAGGGGAGAAGATTTTGTTGGCCAAAACAAGAG
AACGAACAGGACCAGCAGCAGCGGCAGGAAGACGAACAGCTGCAGCAACA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCAGCCACCGTCGC
AGCAGCAGCAGTAACAGGAGCTGGCGCTTCTGCGACTGCGAGGAGAGGGG
GAGTGAGGGAGGGAGGGAAGGAGAAGAGCACTCCGTCCACGCTTTCCAGC
AAGACAATTAGCTTGAAAGAGGCCCAGGAAAGGGGAGAGGAAATGAAAAA
GGCGAAGGAATGTGGAAACGAAGAGAAAGAGAGGGTGGAAGAAGGGGAAA
AGAGAGAGATTTCTGCTATTGGGTCGTCTCTTGGAGTGGGGGAAATGACG
AGTGTCGTGTGATTCGAGGAGGGAGGGAGAAAGCGGTGTGCATTCGTAGA
GGCATCTAGAGGATGCTTTTATTTGACAACCATAGAGAGAAAATAGTCGA
GAAAGTGAACAGACAGAAGGAAAGAAGACGAAGAACAAGGACAGGCACAA
TAGCAGGCACAGGAACAACAAGATGAAGGGAAAGAAGAGGAAAAACAAGA
AGAACAAGAAATAGAACGAAAAGAAAGGTGAATTGTATTGAAGAACAAGG
AAGTGGAATCGCCGCAGAGGATGAGAGAGGCAGAGAGGGAGGGAGGGCGA
GGACGTTTGCATGTGTCGTGGTCCACTGGGCATAGTAATATGTTGATCGC
AACGCCCGCGGTAACTAAGAGAGAAATTGGGTGGCCTCTGCCTGTGTGCC
CCCCCTTGTGGTGCATATTTTCCCCGTTTCCCCTTAGCAGGATGACATCG
AGGGAGGGAGGTTGGACGTCTTGCAGAGAAGAAAATAGGCATGTTAATGC
GACCGGCGCATGGCACAACAAACGCAAGATGTCACCTGCCCCCGCGACAG
GGCCAAGCTAAGACGAGAGAGAGTGGACGCAAAAGAGGTTAGATGGTCAA
CATACGAAGTAAAAATATAGGAAGGAGAAAGTAAAGCACAAAGCACGCTG
CAGAGACACAAACATT

Coding sequence (CDS) from alignment at chr21:183594..187309+

>NO21G00530.1 ID=NO21G00530.1|Name=NO21G00530.1|organism=Nannochloropsis oceanica|type=CDS|length=2844bp|location=Sequence derived from alignment at chr21:183594..187309+ (Nannochloropsis oceanica)
ATGGCTACCCCTGGCGGAAGCGGTAGTTGCACTGGAAGCGGCGGCATATA
TCGCATGCCTGCAAGTCGTGGCATGCCATCACCCTCCTCCTCGTCAGTGC
CCGCGACGCCCACGCCCCCCACTCCTACTCCTGCTGCTGCTCCTGGACTC
ACCACTCCCTCCTCTTCGTCAACCCATAATCGCGGCCACATTCCTCGTCG
CTCTTCGAGAGGAAGCAGCGTCCAAACAAAGGCCACCGCCAGCAGCCTGC
AAAAACGTCGCAGCATTGTGCACACCCAAACACTGACCCCCGGCGGAAGC
AGCGCCTTCAAAGGCAGCGTCCTCCCTGTCTCCCACCCACACACCCCGGA
AAGCGCCGGAAAGGACTTGCTGTCCTCGTCTTCTCCCCATTTATCCAATT
TTCCTGCCTCGGGATTGTCAAAGACACGTCCCTTGTCGATTTCATCCCCA
GGGCAGGCCCGCGCCCACGACCACGGACCCTCCCCCCCTTCCTCCTCCTC
TTCATCCTCCTCATCTATCGCGGCTCGCCAGGTGAAGCCCCAGCTTCAAG
CGGCCGCCTTCGCCGTCGCCCCCTCCACCCTCGACCTTTCCTCCCTCCCT
TCCTCCACCTTCACCTCCACCTCCACCACAACTTCCTCCTCCTCCTCGGC
CAAGCTCGTCGTCATTTCCGCGGAAGAAAAGGCGATGGACGGCGCCCCCC
AAGGGACCGTGTACCAAGTGAAAGTCCAGACAACAGAGGAGTGCCGTCCC
TCCCTCAATCCATCCCTCGACCTGAAGCTGGTGCTGGATACCTTGACGGA
GGCACAGGCACGTTCCAATCCGCATTCCCTTCCTTCCTCCTACCCCTCCT
CGTCCTCTGTCACAACTACTGCGGCTCTTGGAGCAGGAGGTGCAGGGGGC
AGAAGGGAAGTAGGGTCTGCTGCTGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGACAAAGCAATCTTAGACTGGGCCCATGAATACGAATGCATCGACG
CCGTCCGCCGCCTGTGCCACCACCCCTCCCTCGGCCCCTCCCTCCTTCAG
CCCCACCTCCCCCTCCTCCTCCCCTTCCTTATCCGCTCCGTTCAGAACCT
ACGTTCAAGTATGCAGCGGAACGCCCTCCTCGCCCTCCGGGAGCTCTTCA
ACCCTGCCTGCCTCGGGCCTGCCTTCCCCCCCTTTCTCGGCACTCTCTGT
GCGGCCCTCCTCAAAAAGCTGTCGCATGGAGACAAGAAATTCATCTGCCA
AGCTTGTGAGGATGTGTTGGAGGCAGCGATCGAAGGAGGGGGAGGAGCCA
CCGTGCCCTTCCTCCTTCCCGCCCTCCTCCCTCTGGTCAAGGACCGCAAT
CCGGAGATGGCCGCGGCGAGCCTGGTATGGATTGAGAAGGCTCTTATGAA
AGCTTTGGAGGGAGAAAGGGAGGAAAGGAAGGAAGACGGTGGCCTGGCAG
CGTTGATGGGTGGGATGACCTCCGTCGCTATCAGTAGCATCAATAACACC
AGCAACCACAGCAGCAGCAGTAGCACCCCTCCTCTCCTCCCCCCCGGGCC
AATCGACACCTCCCTCCCCTCCCCTTCCTCCCTCCCCTCCTTTCTCCATA
CTCCTGACCCCCCCCTCCTTCCCTCCCTCCTTCAATCTCTCGGCCTGGGG
TATGACCGCTGCAGGTTGGCTCTCGGGAAGAAGGCCGCCAAGCGTTCTCT
TCTCCTCCTGCGCGCACAGATGGATGCTGGAACGGAGGAGCGCGAGGGAG
GGGGGGGAGGCGAGAAAGAGAGAGAGTCTCCGGGAAAGGTGGGAGGGAAG
GAGGGAGGGTTGTTTGAGAAGGCACTGCGGGCGACGACCTTGACTAAGGG
AGTAGTGGAGGACATTCTGAGGCATACGTCCGATGCCGCGACGAAGCGGA
AATCCCTCTCTGTGGTGTCCACCCCTGCTTCCTCCCCCTCGTCCTCGTCC
TCGTCCTCGTCCTCGTCCGTCTCGTCGGCCTTTTCCACGATTGGCTCGTC
AACATCTTCTTCTACTACTTTTTCTTCCTCTTCTACATCCACAGCCACTT
CGTTTCGGAGGACGACGGGTGTGGAGGTGAGTGCGCGGGGAGGGAGGGCA
GGTGGAATGTGTGGAGGGAGGGAAGGAGGGAACAGTGCTACGCGGACAAC
ATCGGCCTTTCGGCAGCATGTAGCGGTGATGAAGAGAGGGGGAGGAGGAG
GAGGAGGAGGAGGGAGGGGAGAAGGGATGATCAGTCATCGCAGGCCTCCC
TTCTCTTCTTCTTTGTCGTCTTCGTCTGTTGTAGTGGCTTTACCGCCACC
AGCGGTCAGGAAGGGAGAGAGGGAAGGAGGAGTATTGGTTGGGAACGATG
ATAGCAGCGTGAGTCGCCCCACCATCAGAAGCAACAGCAGGGTCGTTGCT
ACCACTGCCAGCAGCAGCACGACGCCGGACGTCAAGAGCAAAGAGGAGGA
AGGGGAGAAGATTTTGTTGGCCAAAACAAGAGAACGAACAGGACCAGCAG
CAGCGGCAGGAAGACGAACAGCTGCAGCAACAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCGGCGGCAGCCACCGTCGCAGCAGCAGCAGTAACAGG
AGCTGGCGCTTCTGCGACTGCGAGGAGAGGGGGAGTGAGGGAGGGAGGGA
AGGAGAAGAGCACTCCGTCCACGCTTTCCAGCAAGACAATTAGCTTGAAA
GAGGCCCAGGAAAGGGGAGAGGAAATGAAAAAGGCGAAGGAATGTGGAAA
CGAAGAGAAAGAGAGGGTGGAAGAAGGGGAAAAGAGAGAGATTTCTGCTA
TTGGGTCGTCTCTTGGAGTGGGGGAAATGACGAGTGTCGTGTGA

Synonyms

Publications