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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr20 | genome | chr20:745588..750097 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO20G02440.1 ID=NO20G02440.1|Name=NO20G02440.1|organism=Nannochloropsis oceanica|type=mRNA|length=3040bp CGGATGTGACAAACACAATTGTCTTCGCCGTTATCGCGACGTGTTCCTGC TCCTGTTCCTGTTCCTTCCATGTTGCATGTTGCCTTGATCCTGCTCGGGA GTGCTGGCGTCTTCGCTTGGTTTGTTGACTAGTGTGGCTTGATGGGGCTC ATGTGGTGCTGCACATGCATGCGTGCCAAACCTTTCTTGCTTTTGTGTCC TTTTTTCCTTGCTTACCAACGGCCGGCTTCCATAAATTAGCTCACGCGTC CGGCCCGCGTGGCCTGCTGCGTGCTGCAAATCCCCGCCCTGTACCACTTT ACATTTTTAAGAAAAAGAGGCCAAAGCAAATATGCACGTAAAGGAGCAGT CATTCTCCCTCCTTCACGTCCGCATTGTTGTGTCTGTCGAAAAAAGGAAA AAAACTCCTCTTTCTCAGTACACCCATATAGCATCTTCGTCATCGTTTAT CAATTCGACTCACATGCACAAATGCACAAATGCACAGTCGTATCACCAGG ACATCGAAGAGGCAGCACTTATATCTGTGCCTGTCTATATATATATATTT AAACGCGGCGACGTCTGGGCGGCAGTGTGTCTCCAGAACGGGGGGGGACA GCAGCTCAGAAGCTGTGCGGCTGCTACACATACCTTTTTCGCAGGATAGC GATAGCGGCACTTGACCCCAATTTTGGCTTGTAAATGCACAACACCATCG ACCTTGAAAAGAGCCACAAGAGGAGCAGCAGCAGCAGCGACTAGCCGCAA CTCCTATTTTTGCTTCAGCAGCCGTGTACATACATACATACACCGATTTT GATTCTGAGACTCATGTACGCGTCTCAAATGCCCTCCCTCCCATCCTCTC TCCCTTATTTCCTTCCTTCTTCCCTTTCTTCCTCCTTCCTTCTTCTTTCT CTGCCTTCCCCCCCGCTTTCTTTTCCCCCTTACCCCTGTTTATCGTCAGA AGGAACGTACAGGTGCCACTACCGCCCTTCCTCATCCGACACCGAGCCCC CTCCCCCACCCTCCCTCCCTCCTTCTCTAGATGAAGCATTCTCATGACCC GTTCCTGATGGGCCACTTGCCCACTTCTCTTTCCACCTACAATTTTGATC ACCTCCAGCAACTAGAAGGCGGCGGCAGCATCACCTTTGCCTCTTCGTCT CCCTACCTGCCCCCTCACCAGCAAATGAAGGAGGAGGGGGAGGAGGAGGA GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGGGAATG GACGCGGGGCAGTATATAACACATTTTTGGCTATCCACAGAGACTACCGT CTGCATGAGCTTCCATCTTTCCCTCCCTCCCTCCCTCTCAGTATTGGAGG GGGAGAGGGAGGGGAGAGAAGCGAGCAGCTTTACTATCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACTCCCCTTATCAC CACCGTCAAGAGCAGCTACAGCAGCAGTATGACAAACACCTCCACCACCA TCCGCAGCAGCACCAGCAGCAGCAGCTGTATCACCAGCACCATTACCAGC AGCAACGGCAACAACACCAGCAGCACCAGCACCAGCACCAGCACCAGCAG TACGACAAACACCTCTTCTACCAGCAGCAGCAGCATGGTGTTCAGTACAT CCCGTTGTTGACAGAAGCTGGAGGAGAGAGAGCGGAGGACGAAATAGAAG AAAGAGGAGAAGGAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCACAAGGGACACTCGAAGCCTCTTTTTCTCTGGATTCCAATGCGAG CTCAACCAATTATATATGCCCCCCCCCTCCTTCTGACGACGATTGCGAAA GAGGCGCGTGCATCTCGGAGGAAGAGAGCGAACAGCAGCAGCAGCAGCAG CAGTACCAGCAGCAGCAGTACCAGGTGGAGGAGGACGAGGACGAGCTCAT CATAAACGACGAGGTGAACAGCACGAAAGCCTATCCTGCCCTCGTTCCCT CCCTCCCTCGTTCCCTCCCTCCCTCCGACATCGTTTCCTTGGGCCACTCC AAGCGATCACGGAGGAGGGCACTTAAATCAATCCCTCCCTCCCTCCCGCC CTCCTCCCCGCCCTCCCTCCCGCCGTCTCTCCCCGCGCCGCAGACACGGC AGGGGGGCAAGGGAGGGAGGGAGGAAGGGAAGGAGGGAGGGAGGGAGGAA GGGCGGCTGGAGGAGTTGTGGGGCATGACGTGGAGGCGAGAGATCAGCAA GGAAAAGAAGTCGATTCTGGTATGTTCGCTCCCTTCCGAAGCTGCCTATG AATCCCTCATGCGCCGTTTTGAGGGGGGCGGGGCCGAAGGCGAGATCAAG GAGTCATTCTCCTGGGTGACGGACCGAGGCCGGAAGCATTCCAAGGCCGC CCTCGGCCGTATGCAGCGGATGCGATGGAAGGACACGTACAACTGTTTCT ATGGGCGGCGGCACACTAAGCGCCAGCCTGAAGGGAGGGAGGGAGGGAGG AAGGGAGGGAAGAAGAGGGGGGGAGGCAGGAAGGGAGGAAGAGCGAATGC GGAAGGCGAGGAAGAGGATGAAGAGGAGGAGGAGGGTGCAGGGCGGAGCG GGCGCATCTCTCAGAAAGTGTCTTGCTCGGCGTCGCTCTCAGCCACCTGT ATGCCTGACGGCCACGTGGAGCTACGGTATTACGACACCCACGTTGTCCA CCCTTCCCCCCTGGGTCTTATGGCGCCAGGCCCAAAAAAAGACGTTTTTC TCCCCCTCCTCCCTCCTCCTCCTGCACTTCTTCCTCCGCCTCCTCCGCCT CCTCCTCCTCCTCCTCCTCCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCC TCCTCCTCCTCCTCCTCCTCGCTTCCTGTGCTTCCCTCCGTGGATGGAGG GAGGGAGGGAGGGAGGGAAAAAAGGAGGGGAGCAGGGAAGGAAGGAGGGA GGGAGGGGGAGGAGAGGGTGGCACGGATGCTGCCGGTGGTTAGATGGAAG TAAGAAAGCGAGAGAGGGAGGGAGGTGCGGGTGCCGCTAA back to topprotein sequence of NO20G02440.1 >NO20G02440.1-protein ID=NO20G02440.1-protein|Name=NO20G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=670bp MKHSHDPFLMGHLPTSLSTYNFDHLQQLEGGGSITFASSSPYLPPHQQMK EEGEEEEEEEEEEEEEEEEEEGNGRGAVYNTFLAIHRDYRLHELPSFPPS LPLSIGGGEGGERSEQLYYQQQQQQQQQQQQQQQQHSPYHHRQEQLQQQY DKHLHHHPQQHQQQQLYHQHHYQQQRQQHQQHQHQHQHQQYDKHLFYQQQ QHGVQYIPLLTEAGGERAEDEIEERGEGEAAAAAAAAAAAAAQGTLEASF SLDSNASSTNYICPPPPSDDDCERGACISEEESEQQQQQQQYQQQQYQVE EDEDELIINDEVNSTKAYPALVPSLPRSLPPSDIVSLGHSKRSRRRALKS IPPSLPPSSPPSLPPSLPAPQTRQGGKGGREEGKEGGREEGRLEELWGMT WRREISKEKKSILVCSLPSEAAYESLMRRFEGGGAEGEIKESFSWVTDRG RKHSKAALGRMQRMRWKDTYNCFYGRRHTKRQPEGREGGRKGGKKRGGGR KGGRANAEGEEEDEEEEEGAGRSGRISQKVSCSASLSATCMPDGHVELRY YDTHVVHPSPLGLMAPGPKKDVFLPLLPPPPALLPPPPPPPPPPPPPPPP PPPPPPPPPPPPPRFLCFPPWMEGGREGGKKGGEQGRKEGGRGRRGWHGC CRWLDGSKKAREGGRCGCR* back to topmRNA from alignment at chr20:745588..750097+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO20G02440.1 ID=NO20G02440.1|Name=NO20G02440.1|organism=Nannochloropsis oceanica|type=mRNA|length=4510bp|location=Sequence derived from alignment at chr20:745588..750097+ (Nannochloropsis oceanica) CGGATGTGACAAACACAATTGTCTTCGCCGTTATCGCGACGTGTTCCTGC
TCCTGTTCCTGTTCCTTCCATGTTGCATGTTGCCTTGATCCTGCTCGGGA
GTGCTGGCGTCTTCGCTTGGTTTGTTGACTAGTGTGGCTTGATGGGGCTC
ATGTGGTGCTGCACATGCATGCGTGCCAAACCTTTCTTGCTTTTGTGTCC
TTTTTTCCTTGCTTACCAACGGCCGGCTTCCATAAATTAGCTCACGCGTC
CGGCCCGCGTGGCCTGCTGCGTGCTGCAAATCCCCGCCCTGTACCACTTT
ACATTTTTAAGAAAAAGAGGCCAAAGCAAATATGCACGTAAAGGAGCAGT
CATTCTCCCTCCTTCACGTCCGCATTGTTGTGTCTGTCGAAAAAAGGAAA
AAAACTCCTCTTTCTCAGTACACCCATATAGCATCTTCGTCATCGTTTAT
CAATTCGACTCACATGCACAAATGCACAAATGCACAGTCGTATCACCAGG
ACATCGAAGAGGCAGCACTTATATCTGTGCCTGTCTATATATATATATTT
AAACGCGGCGACGTCTGGGCGGCAGTGTGTCTCCAGAACGGGGGGGGACA
GCAGCTCAGAAGCTGTGCGGCTGCTACACATACCTTTTTCGCAGGATAGC
GATAGCGGCACTTGACCCCAATTTTGGCTTGTAAATGCACAACACCATCG
ACCTTGAAAAGAGCCACAAGAGGAGCAGCAGCAGCAGCGACTAGCCGCAA
CTCCTATTTTTGCTTCAGCAGCCGTGTACATACATACATACACCGATTTT
GATTCTGAGACTCATGTACGCGTCTCAAATGCCCTCCCTCCCATCCTCTC
TCCCTTATTTCCTTCCTTCTTCCCTTTCTTCCTCCTTCCTTCTTCTTTCT
CTGCCTTCCCCCCCGCTTTCTTTTCCCCCTTACCCCTGTTTATCGTCAGA
AGGAACGTACAGGTGCCACTACCGCCCTTCCTCATCCGACACCGAGCCCC
CTCCCCCACCCTCCCTCCCTCCTTCTCTAGATGAAGCATTCTCATGACCC
GTTCCTGATGGGCCACTTGCCCACTTCTCTTTCCACCTACAATTTTGATC
ACCTCCAGCAACTAGAAGGTAGACCGGGAGGGAGGGAGGGAGGGAGGAAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCCTACTTCGACCATCAGAAA
GTCCTCATGGTGCTGATCCTCCCTCCCTTCCTCTCTCCCTCCTCCCCTTT
CACTCACCAGGCGGCGGCAGCATCACCTTTGCCTCTTCGTCTCCCTACCT
GCCCCCTCACCAGCAAATGAAGGAGGAGGGGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGGGAATGGACGCGGG
GCAGTATATAACACATTTTTGGCTATCCACAGAGACTACCGTCTGCATGA
GCTTCCATCTTTCCCTCCCTCCCTCCCTCTCAGTATTGGAGGGGGAGAGG
GAGGGGAGAGAAGCGAGCAGCTTTACTATCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCACTCCCCTTATCACCACCGTCA
AGAGCAGCTACAGCAGCAGTATGACAAACACCTCCACCACCATCCGCAGC
AGCACCAGCAGCAGCAGCTGTATCACCAGCACCATTACCAGCAGCAACGG
CAACAACACCAGCAGCACCAGCACCAGCACCAGCACCAGCAGTACGACAA
ACACCTCTTCTACCAGCAGCAGCAGCATGGTGTTCAGTACATCCCGTTGT
TGACAGAAGCTGGAGGAGAGAGAGCGGAGGACGAAATAGAAGAAAGAGGA
GAAGGAGAAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACA
AGGGACACTCGAAGCCTCTTTTTCTCTGGATTCCAATGCGAGCTCAACCA
ATTATATATGTGAGGGAGGGAGGGAGGGAGAGAGGAAGCATGGTTCCATC
AATGTCCTCATTCGGTCTCCTCCCTCCCTCCCACCCTCCCTCCCGCCCTC
CCTCCCGTAGGCCCCCCCCCTCCTTCTGACGACGATTGCGAAAGAGGCGC
GTGCATCTCGGAGGAAGAGAGCGAACAGCAGCAGCAGCAGCAGCAGTACC
AGCAGCAGCAGTACCAGGTGGAGGAGGTAGGAAGGGAGGGAGGGAGGAAG
GGAGGAGGGAGAGGAGGGAAGAGGGAGGAGGAAAGGTTAAGGTTAGGGTT
AGCTATGCCCTATGCCTCGAAAACCTTAGCAATAATTTCCATCCATTTCT
TTTCTCTGTCGCACGCCCTCCCTCGTTCCCTCCCTCCCTTCCCCGCCAGG
ACGAGGACGAGCTCATCATAAACGACGAGGTGAACAGCACGAAAGCCTAT
CCTGCCCTCGTTCCCTCCCTCCCTCGTTCCCTCCCTCCCTCCGACATCGT
TTCCTTGGGCCACTCCAAGCGATCACGGAGGAGGGCACTTAAATCAATCC
CTCCCTCCCTCCCGCCCTCCTCCCCGCCCTCCCTCCCGCCGTCTCTCCCC
GCGCCGCAGACACGGCAGGGGGGCAAGGGAGGGAGGGAGGAAGGGAAGGA
GGGAGGGAGGGAGGAAGGGCGGCTGGAGGAGTTGTGGGGCATGACGTGGA
GGCGAGAGATCAGCAAGGTAGGGAGGGAAGAAAGGACGGAGGGAGAGAGG
GAGGGAGGTAGAGAAGAAGGAAACATGTTAAAATACACGGCTGGCAACAC
TGCTCGCCCTGACCATTCCCTCCCTTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCTTTCTAGGAAAAGAAGTCG
ATTCTGGTATGTTCGCTCCCTTCCGAAGCTGCCTATGAATCCCTCATGCG
CCGTTTTGAGGGGGGCGGGGCCGAAGGCGAGATCAAGGAGGTACGCCCTG
ACCCTTCCCGCCCTCCCTCCCTTCCTCCCTCCCTTACTTGCTCATTTTTA
TGCTTCATCCCTCCCTCTCTTTCTTTCTTCCTTTCTTCCTTCCTTCCCTC
CCTCCCCCCTCCTTCCCTTCCTCCTCACCTTTCCTTCCATGGCATTAGCT
GCATACGGCTAAGGGCGATCATGGAATACATCCCGTTCCTACTCAGCCCT
CCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCAGTCATT
CTCCTGGGTGACGGACCGAGGCCGGAAGCATTCCAAGGCCGCCCTCGGCC
GTATGCAGCGGATGCGATGGAAGGTAGGTAGGGAGGGAGGGAGGGAGGGA
GGGAGGGGGGGGGGGAGGAAGGGAGGGAGGTGTGAAAGATACAAGTCCTT
TGCGGGGGAAAGGGAAGGAAGAAAGGAAGGAGTAAGGGAGGGAGGGAGGG
AGGGAGGATTCGTCGATAAATGAGTCAAGCGTCTCATCTACCGGCATCGA
CCTCTAATAGCCCTCTTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CAGGACACGTACAACTGTTTCTATGGGCGGCGGCACACTAAGCGCCAGCC
TGAAGGGAGGGAGGGAGGGAGGAAGGGAGGGAAGAAGAGGGGGGGAGGCA
GGAAGGGAGGAAGAGCGAATGCGGAAGGCGAGGAAGAGGATGAAGAGGAG
GAGGAGGGTGCAGGGCGGTAAGGGTCAAGGCCAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAATAAGAAAAAGCCAGATTG
AATGGCCTGACAACACCGACATTCCCCCTCCCTCGCTCCCTTCCTCCCTC
CTTCCTTCCTTCCCTCCCTCTCTTCCTGCAGGAGCGGGCGCATCTCTCAG
AAAGTGTCTTGCTCGGCGTCGCTCTCAGCCACCTGTATGCCTGACGGCCA
CGTGGAGCTACGGTAAGGGGAGGGGGGAGGGAGGGAGGAAGGAAGGAAGG
AAGGAAGGAAAGCTCGAGGCCCAGGTTTTATCCACACTAATCCTCCTTCC
TTCCCTCTCTCCCTCCATTTCTCCATCCATCATTCACACTAACCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTAGGTAT
TACGACACCCACGTTGTCCACCCTTCCCCCCTGGGTCTTATGGCGCCAGG
CCCAAAAAAAGACGTTTTTCTCCCCCTCCTCCCTCCTCCTCCTGCACTTC
TTCCTCCGCCTCCTCCGCCTCCTCCTCCTCCTCCTCCTCCGCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCTTCCTGTG
CTTCCCTCCGTGGATGGAGGGAGGGAGGGAGGGAGGGAAAAAAGGAGGGG
AGCAGGGAAGGAAGGAGGGAGGGAGGGGGAGGAGAGGGTGGCACGGATGC
TGCCGGTGGTTAGATGGAAGTAAGAAAGCGAGAGAGGGAGGGAGGTGCGG
GTGCCGCTAA back to topCoding sequence (CDS) from alignment at chr20:745588..750097+ >NO20G02440.1 ID=NO20G02440.1|Name=NO20G02440.1|organism=Nannochloropsis oceanica|type=CDS|length=2010bp|location=Sequence derived from alignment at chr20:745588..750097+ (Nannochloropsis oceanica) ATGAAGCATTCTCATGACCCGTTCCTGATGGGCCACTTGCCCACTTCTCT TTCCACCTACAATTTTGATCACCTCCAGCAACTAGAAGGCGGCGGCAGCA TCACCTTTGCCTCTTCGTCTCCCTACCTGCCCCCTCACCAGCAAATGAAG GAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAAGAAGGGAATGGACGCGGGGCAGTATATAACACATTTTTGG CTATCCACAGAGACTACCGTCTGCATGAGCTTCCATCTTTCCCTCCCTCC CTCCCTCTCAGTATTGGAGGGGGAGAGGGAGGGGAGAGAAGCGAGCAGCT TTACTATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCACTCCCCTTATCACCACCGTCAAGAGCAGCTACAGCAGCAGTAT GACAAACACCTCCACCACCATCCGCAGCAGCACCAGCAGCAGCAGCTGTA TCACCAGCACCATTACCAGCAGCAACGGCAACAACACCAGCAGCACCAGC ACCAGCACCAGCACCAGCAGTACGACAAACACCTCTTCTACCAGCAGCAG CAGCATGGTGTTCAGTACATCCCGTTGTTGACAGAAGCTGGAGGAGAGAG AGCGGAGGACGAAATAGAAGAAAGAGGAGAAGGAGAAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGCAGCACAAGGGACACTCGAAGCCTCTTTT TCTCTGGATTCCAATGCGAGCTCAACCAATTATATATGCCCCCCCCCTCC TTCTGACGACGATTGCGAAAGAGGCGCGTGCATCTCGGAGGAAGAGAGCG AACAGCAGCAGCAGCAGCAGCAGTACCAGCAGCAGCAGTACCAGGTGGAG GAGGACGAGGACGAGCTCATCATAAACGACGAGGTGAACAGCACGAAAGC CTATCCTGCCCTCGTTCCCTCCCTCCCTCGTTCCCTCCCTCCCTCCGACA TCGTTTCCTTGGGCCACTCCAAGCGATCACGGAGGAGGGCACTTAAATCA ATCCCTCCCTCCCTCCCGCCCTCCTCCCCGCCCTCCCTCCCGCCGTCTCT CCCCGCGCCGCAGACACGGCAGGGGGGCAAGGGAGGGAGGGAGGAAGGGA AGGAGGGAGGGAGGGAGGAAGGGCGGCTGGAGGAGTTGTGGGGCATGACG TGGAGGCGAGAGATCAGCAAGGAAAAGAAGTCGATTCTGGTATGTTCGCT CCCTTCCGAAGCTGCCTATGAATCCCTCATGCGCCGTTTTGAGGGGGGCG GGGCCGAAGGCGAGATCAAGGAGTCATTCTCCTGGGTGACGGACCGAGGC CGGAAGCATTCCAAGGCCGCCCTCGGCCGTATGCAGCGGATGCGATGGAA GGACACGTACAACTGTTTCTATGGGCGGCGGCACACTAAGCGCCAGCCTG AAGGGAGGGAGGGAGGGAGGAAGGGAGGGAAGAAGAGGGGGGGAGGCAGG AAGGGAGGAAGAGCGAATGCGGAAGGCGAGGAAGAGGATGAAGAGGAGGA GGAGGGTGCAGGGCGGAGCGGGCGCATCTCTCAGAAAGTGTCTTGCTCGG CGTCGCTCTCAGCCACCTGTATGCCTGACGGCCACGTGGAGCTACGGTAT TACGACACCCACGTTGTCCACCCTTCCCCCCTGGGTCTTATGGCGCCAGG CCCAAAAAAAGACGTTTTTCTCCCCCTCCTCCCTCCTCCTCCTGCACTTC TTCCTCCGCCTCCTCCGCCTCCTCCTCCTCCTCCTCCTCCGCCTCCTCCT CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGCTTCCTGTG CTTCCCTCCGTGGATGGAGGGAGGGAGGGAGGGAGGGAAAAAAGGAGGGG AGCAGGGAAGGAAGGAGGGAGGGAGGGGGAGGAGAGGGTGGCACGGATGC TGCCGGTGGTTAGATGGAAGTAAGAAAGCGAGAGAGGGAGGGAGGTGCGG GTGCCGCTAA back to top
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