NO20G01350.1, NO20G01350.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO20G01350.1
Unique NameNO20G01350.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5585
Alignment locationchr20:402161..407857 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr20genomechr20:402161..407857 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO20G01350.1 vs.
Match: EWM22075.1 (hypothetical protein Naga_100039g28 [Nannochloropsis gaditana])

HSP 1 Score: 213.4 bits (542), Expect = 9.000e-52
Identity = 174/275 (63.27%), Postives = 195/275 (70.91%), Query Frame = 0
Query:    1 MSRSRSRSSERERGGSTSGMRRRRDDDRDRGRDRNHKRREDSGSRSRERDRDGRKKHQHRDKERGKDKKKYSSRRDGSGGGGSGSGKRRRRSPS---SSSSFSSLSPSPLRSKTQTGGRAHPKPPSTTASTSAMLYSRASLKEQRIVDEEVIRRFDDRIKELLEEKVSVYCESSEFKTFLDEMKKRKREEMLSKIDQDIRAEREAMLALEREKAEAAAEEQRKLDEVLEENRRKVEEQRRLEMEEKARQDEQKLMQIQRRQQQEEEAERRRVVSV 273
            M RSRSRS  R  G      RRRR  + DR  DRN KRRE S S  R R+ DGR+KH HRD  R   K K ++RRDGS         RRR+ PS   SSSS SSLSP     K   GG  H KP ST  +      SR S  EQRI+DEEVIRRFD RIKE LEEKVSVYCESSEF+  L++MKKRKREEML++IDQDIRAEREA+L LER++AEA AEE+RKL +VLEENRRKVEEQRRLEMEEK RQDEQKL++IQRRQQ EEE E+RRV  V
Sbjct:    1 MPRSRSRSLSRGSG------RRRRGREEDRDYDRNRKRRERSRSSGRHREGDGRRKHSHRDDLR---KGKKAARRDGSYDDDEKFSGRRRQRPSPSLSSSSSSSLSPPRGTDKASKGG-LHHKPQSTHFT------SRPSPLEQRILDEEVIRRFDSRIKEQLEEKVSVYCESSEFQKLLEDMKKRKREEMLNRIDQDIRAEREAVLDLERKRAEAEAEEKRKLAQVLEENRRKVEEQRRLEMEEKERQDEQKLLEIQRRQQMEEEEEKRRVRGV 259          
The following BLAST results are available for this feature:
BLAST of NO20G01350.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22075.19.000e-5263.27hypothetical protein Naga_100039g28 [Nannochlorops... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01350NO20G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO20G01350.1NO20G01350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO20G01350.1.cds1NO20G01350.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO20G01350.1.cds2NO20G01350.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO20G01350.1 ID=NO20G01350.1|Name=NO20G01350.1|organism=Nannochloropsis oceanica|type=mRNA|length=5585bp
ATCGCAGCCGAAGAAACATTTTGGCCTTTCTTTTCTTCATTCATTTCGTA
TTGTTTCGGCCGTCTTCTCTTTCTTATTATATCCCCATCTATCGTTTTCT
GTATCTCCGGACTCTATTTCCATTCGTTACACTCTACAAAGGAATCGCCT
CCCTCCATGCCTCCCTTCCTCCCTCCCTCTCCCCCTACTCAAAATACTTC
CGGCGCAATGCCCTCAACCTGATCTTCCCTTTCTTCCCTCCACTTCCTCC
TTTCGTCGTTGCACTCCCATCAGCACCACCATCAGCAGTATCGGTGGCAC
CTAAAAAGTCAAAAGCCTTTTTAACATTCTCCAAGTCTTCAGCCGACATC
ATGCTCATCCTCAACTGAAACCCCTCCGCCCCTGCCATCCCCTCCAACAC
CCTCTTTACCACCTCCCTCCTCCCCTCCATCCCTCCCCCCTCCCCTTCCT
TACACAGTTCTCTGGCTAACACTGCGTATATCTCACTAATTGTGTCCTCG
CTTGTGACTCTTTTGATGACTTTTGAGAAGGTTTGGGGACGGAATGAGGA
GAGGTAAGCGGCGAGACGAGCGGTGGAACCTGAATCTCCGCCCTTTTTCA
AGGTTCGCCAGTGTGTCTCGAGCTCGGAGATGCTTGTTGGGGGGGGGGGA
TTTTCTTCTTTCCGGAAGAAAGGGGGGAGGAAACGGAGGAGAAAACAGAG
GAGGAGGAGGAGGAGGGAAAAATGGAGGAATGACTGTTTTTGAGTGGGGT
TATGGGTAGCTGCTGTCCTTGACGACGTCGCTCTTGTTGTTCATCTTGCT
CTTGTCTTCTCCCTTCCTCCACCACGGCTATTTTTCGAAAAGCTTCCACA
GGTGGGACTCGAGGTCGCGTCGTCACTTCTTGCATCATGGAAGAGGTCCC
TCCCTCCTTCCCTCGTTCTTCACCGGCAATCTCCGCCCGGTGCGCTGCCA
AAATTGTTTTGAGTTCATTAGGGGGAGGATGCGGCGAGGAGGAGGGAGGG
ATGGATGACGCGCCTACCACTCCAGCAGCGCCCATATGTCCTACTTGTTT
AAAAAGCTGTTGATACTGACTCAACAGCGACTTAGCCAACCGTCTCTCCT
TTTGGGCCTCCGCGTTGCCGCTTTCTACCGCAAGAATCATGTTCATCTCC
TTCACAGCATTTTCCAATCCCTCCTTCGCCCTTCCCACCATCCCTTGTTT
CCGAACAACACACATGCTCTCCGCTTCCTTCTCTCTCGCTCTCAATACCT
CTTCCCTCGCCTCCTTCCCTGCCTCCTTCTTCTTCCACAATGCCTCCACT
GTTGCCAAGCATTCTGCTCCTCCTCTACACAAAGCCTTTCCCTTCCTGAA
TCGGGCTTTAATATTTCCCGGGTCCTGGTCGAGGACGAATGAGGCATCTC
GGAAAGCCTCCTCCCATCGTTCGAGTTTGAGGTGGGCCTGTGCGCGATTA
TTGTACAGGATGAGGGAAAGCTTAGTGGTGGTGGTGGCGGTGCTGCTGCG
GCTGGTATTGTGGTTGCTTTCGCTGAAATAAGTGGTGGTGGAACTGTTGC
TGCTGTCGCTGTTGGCGGCATCGGCGGCAATCGCTTCAGTATAGTGCTTT
ATGGCGGAATGGTAGTTTTTTTCTAACAAAGCATTGTTCCCTTGTTCTTT
CAAAATATGAGCTCGGTCGTTTCTGTTGCTGCTGTGGTTTTTGCTGCTAC
TACTTTTGGCACTGCTGCCATCCATCTTACTCGACCCCTGACGCTGCTGC
TGCTGCTGCCACTGTGCTTTCGTCACGTATTTTCCGTCTCTTACTTCCTC
GATGGGAAGACGTTGGAAGCCCGGGCGTACAGGAGGAGGCCAAATATAAC
CGTCTTTCCCTCCTTCCTTCCCTCCCTCCGTCCCCGCTGCTCCTACTGCT
GCCACCGCTACTGCCGCTGATTGTGGCCCAGGTGTGTTGGACGAGTCAGG
GTTGTCCCTCTCCTCGCCTGCATCTTGCTCTTCAACCGCTACCTTTTCCT
CCTTTTGCTCCACTAGCGAAATACCGGCAGAAACCGCGGGTATGTCGTCG
ACAAGAGAGTCGGCAGCAGGAGGAGGGGGAGGAAGATGAGGAGGAGGAGA
GGAACTGCTCGGTGGTGGCATTGCGGGCTCCCCCCCTCCCACTCTTTCTC
CTTCCTCTTTCTTCCCGTCCTCCTTATCCATCTTCGCCAACAGCGCCATT
GCTTCCTTTTCCTCCATTCCAGCCTTTCCACTTCCTCCTTTCATTTCTCC
CGGAGCAGCAGCAGCCGCACAAACCACCAAGACCTGCCTCAGATCCCCTC
GCGCTTTATCTCGTTTTTCCATTTTGTGCCTTATCATCCCTCGTCGAAGC
CAAGCCTTGGCATATGAGGGCTCTCTATTTATGGCCATTGTGCAGTCCGC
TTCAGCTTGGTCAAAAATTCCCTGTTTCAGCATGGCCAAGGCCCGATTCG
CACACACCACAGCATTTTCAGGAGCGTGGCCGAGTGACAGAGTGTAAGCG
GCGCGGGCTTCGGAATATTCCCCCTGCTTGAGTAGCTTGTTGCCGTCTTC
CTTCTTTTGGGCGGCGAGGAGGGGACGGAGCGAGAGAGGGGTGTGGCGGA
GGCATTCGCTCATGTCCCTTATTTCCTTTTCCGCAGCTTGGACCTTTTCG
TCCTCGTCCTCGTCCTCACATTCCTCCTCCCTCTCTTTTACTGCCATGAT
TGCTGTTGCTGATGCTTTGGTTCCTGCTGGTGCTGCTGTTGTTGCCGTTG
CAATCGGTAGTGCTGTAGCACTGCCCGAATTCGTCGTCGTCATCGTAATA
ATCGTCCTGGCAGACCGGGAAGGGGGACTACTCGACTCTACCACCACCAC
TCCTGGTTCATTCCTCATTCTATTACTCCCAACAGCAACACCACGCTTCA
TCCCCATCGCGGCATCTTTTCTTTCCATCTCATCACTCCACTCCTGCAAA
ATCTCTTCCTCCTTGGCGACCTCTACCGGGCACGGCTGCGCCCGCAACGC
CTTCACTTGGGCCTGGACTCGGGTAGGGGACAATAGCACTAGCCTGTCCA
ATGTTTCCCGTTCTAAATCGGGGTAGACACCATCTTGTCTGCCCTGGAGC
CGACGGAGGATGCAACGGATAACCTTGGGATCGTCGCAGTTTTGGATAAA
ATCGAAGTCGAGCAGGTCGGTAGTAATGGGGATGGGGGAACGCTCATCGG
CTGGGTACGGGGCCAACAGCAGTTCAGAAACAATATCCATGGCGTCCATT
TGCTGCTGTTGCTCGGTGCCGAGATGAGGAGACTAGGAGACTGCCTGTAG
AAAATGTACGTGTGTACTGGAGGAGTGTGAAAAGGGGGGGAGCATAGGAG
GCAGTGAAGCAAGCTTTCGGGTGAGGGGTTATTCTCGAAAGTGGCACGTT
TGAAGCGCTGTGGAAATGCGGAGGACGAGGAGGGGACGACTGCGTGCCAC
GTGGGTGTGTTGTGGGGGCGTGAAAGCGGCATAAATAGCGCTTTGGCCTG
GCTCAATTTTGGGTGTTGTTTCAGAAAGTTCCTTCAAGAAGCAACGCTCT
TATTTCATGTCCTCGTATTCTACTTTACAATACTTTAAACGTCCTCCCAC
CAACCACGCTTTCATCACAGCAACAATAACAAGCAAGGCCTCTTAACGTG
CCAAGCTATGTCGCGCAGCCGCTCGCGTTCTTCCGAGAGAGAAAGAGGTG
GCAGTACCAGCGGCATGCGGCGACGACGGGACGATGACCGTGACCGGGGG
AGGGACCGAAATCACAAGAGGAGGGAGGACAGCGGGAGCCGCAGCAGGGA
GCGCGATCGCGATGGACGCAAGAAGCACCAGCATAGAGACAAGGAACGTG
GAAAGGACAAGAAGAAGTATTCGTCGCGTCGCGATGGTTCTGGTGGAGGA
GGAAGCGGCAGTGGCAAGCGTCGTCGGCGGTCACCCTCCTCATCCTCTTC
CTTCTCGTCCTTGTCCCCTTCTCCCCTACGCAGCAAGACCCAAACCGGAG
GGAGAGCACATCCCAAACCTCCTTCCACCACCGCATCCACAAGTGCTATG
CTATATTCCCGTGCTTCTTTAAAAGAGCAACGGATCGTTGATGAGGAGGT
GATTCGTCGGTTTGATGATCGAATCAAGGAGTTATTAGAAGAAAAAGTTT
CTGTGTATTGCGAGTCCAGCGAGTTCAAAACCTTCCTCGACGAAATGAAG
AAACGGAAACGGGAAGAGATGCTGAGTAAAATTGACCAGGACATTCGTGC
AGAGCGTGAGGCAATGCTGGCGTTAGAAAGGGAGAAAGCCGAAGCAGCGG
CGGAGGAGCAGCGGAAGTTGGATGAGGTACTGGAGGAGAATCGACGGAAG
GTGGAAGAGCAGCGACGATTGGAGATGGAGGAAAAAGCAAGGCAGGACGA
ACAGAAACTGATGCAGATTCAGCGACGGCAACAACAGGAGGAGGAGGCAG
AACGGCGGAGGGTGGTGAGTGTTGGAAGGGAAGGGGGGTAGAGGTTTGGT
GACTTGCGCCATTAATTCTGAGTGAAATTGCGAAGAAGACAAGCTGCCAA
TGCAGGCAGCACTTTGGGCCGCCTGCTTTGGAGGTGGACTATTCTGTCTT
ATTCCTTTCAAATGTATGAGTGTCTGGGGAGCACTTGTCCCCCCTTTTCC
TGTCTTTCCTCCTCCTCCTGCCCCCCCTTCCCCCCTCCTTCTATTTCTTT
TCGCCTCGGAGGTAAGCGGCACCGAGCAACAGCAGAGCAGCAACAGTAGT
AGCAGCATCAAGAAGGGGAAGTAGATTCCAGACCAGCATCCATAAGGGGC
ATGCCTCGAGGAGATACCGTCTCAGGTGTCTCAGGGCGCTATCAGAGCTC
GGTTTTGCTCTTGTGCTTCCGCGGTTTCAATTGTGCAGCTTGAGCAACGA
CGTGAAAGAAGATCACCGAGAAGACGAGGGCGCCCCTTTCGAACCTCCAA
ACGCGCAGACAGAATTGTGTCATGGCCTTCGCCGCTGGCTCCATCCTCAC
TGTGATCGTGTACACAGACAAATCACACACAGGCGTGCCTCCCCTTCTTG
CCTCCCCTCCTCCCTATTCACCCTATTCATTTTCATTTTCACCTCTCCCC
TGTTGTCTTCTCACGCGTGATCGTTTCTCACTCCTCTCTTTTCTTCCCCA
TGTTACTTTCCTCCCTACCTCTCCTTCCTCCTCTTCCTTCCTCCCTCCCC
TCCCTATCCTCCCTTCGTGCCCCTTCCCCTTCTTTTCTGTTTGAGTAGGC
AGAGGAGGTGGCCTTGCAGAAGGAGCAAGAGAAGATTCTCCGTCGACCAC
AGACGAAGATATCGCTGTCGCTAAAAAAGAAGGGGCCCTTGTTCTAGCCG
CTGTCACCGCGAGCGCAAGTGGGGAGGGAAGCAACAAAAGCAAAGCGCGG
GAGTGGAGGAAGTAGACAGGGTCTAGCTGCGATCCACACGACGACCGCCC
TGATGATAGCAGCGAGTTCTTGCGTGTAAAAAGGAAAGGGCGGGTGGAGG
AGGAGGGACATGATAGCGGAGGTACACGAGAAGTAGGAGGATTTAGAGGA
ACAGAGCTGAGATTGCAAAAAAATGTCCGTTTGTG
back to top

protein sequence of NO20G01350.1

>NO20G01350.1-protein ID=NO20G01350.1-protein|Name=NO20G01350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MSRSRSRSSERERGGSTSGMRRRRDDDRDRGRDRNHKRREDSGSRSRERD
RDGRKKHQHRDKERGKDKKKYSSRRDGSGGGGSGSGKRRRRSPSSSSSFS
SLSPSPLRSKTQTGGRAHPKPPSTTASTSAMLYSRASLKEQRIVDEEVIR
RFDDRIKELLEEKVSVYCESSEFKTFLDEMKKRKREEMLSKIDQDIRAER
EAMLALEREKAEAAAEEQRKLDEVLEENRRKVEEQRRLEMEEKARQDEQK
LMQIQRRQQQEEEAERRRVVSVGREGG*
back to top

mRNA from alignment at chr20:402161..407857-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO20G01350.1 ID=NO20G01350.1|Name=NO20G01350.1|organism=Nannochloropsis oceanica|type=mRNA|length=5697bp|location=Sequence derived from alignment at chr20:402161..407857- (Nannochloropsis oceanica)
ATCGCAGCCGAAGAAACATTTTGGCCTTTCTTTTCTTCATTCATTTCGTA TTGTTTCGGCCGTCTTCTCTTTCTTATTATATCCCCATCTATCGTTTTCT GTATCTCCGGACTCTATTTCCATTCGTTACACTCTACAAAGGAATCGCCT CCCTCCATGCCTCCCTTCCTCCCTCCCTCTCCCCCTACTCAAAATACTTC CGGCGCAATGCCCTCAACCTGATCTTCCCTTTCTTCCCTCCACTTCCTCC TTTCGTCGTTGCACTCCCATCAGCACCACCATCAGCAGTATCGGTGGCAC CTAAAAAGTCAAAAGCCTTTTTAACATTCTCCAAGTCTTCAGCCGACATC ATGCTCATCCTCAACTGAAACCCCTCCGCCCCTGCCATCCCCTCCAACAC CCTCTTTACCACCTCCCTCCTCCCCTCCATCCCTCCCCCCTCCCCTTCCT TACACAGTTCTCTGGCTAACACTGCGTATATCTCACTAATTGTGTCCTCG CTTGTGACTCTTTTGATGACTTTTGAGAAGGTTTGGGGACGGAATGAGGA GAGGTAAGCGGCGAGACGAGCGGTGGAACCTGAATCTCCGCCCTTTTTCA AGGTTCGCCAGTGTGTCTCGAGCTCGGAGATGCTTGTTGGGGGGGGGGGA TTTTCTTCTTTCCGGAAGAAAGGGGGGAGGAAACGGAGGAGAAAACAGAG GAGGAGGAGGAGGAGGGAAAAATGGAGGAATGACTGTTTTTGAGTGGGGT TATGGGTAGCTGCTGTCCTTGACGACGTCGCTCTTGTTGTTCATCTTGCT CTTGTCTTCTCCCTTCCTCCACCACGGCTATTTTTCGAAAAGCTTCCACA GGTGGGACTCGAGGTCGCGTCGTCACTTCTTGCATCATGGAAGAGGTCCC TCCCTCCTTCCCTCGTTCTTCACCGGCAATCTCCGCCCGGTGCGCTGCCA AAATTGTTTTGAGTTCATTAGGGGGAGGATGCGGCGAGGAGGAGGGAGGG ATGGATGACGCGCCTACCACTCCAGCAGCGCCCATATGTCCTACTTGTTT AAAAAGCTGTTGATACTGACTCAACAGCGACTTAGCCAACCGTCTCTCCT TTTGGGCCTCCGCGTTGCCGCTTTCTACCGCAAGAATCATGTTCATCTCC TTCACAGCATTTTCCAATCCCTCCTTCGCCCTTCCCACCATCCCTTGTTT CCGAACAACACACATGCTCTCCGCTTCCTTCTCTCTCGCTCTCAATACCT CTTCCCTCGCCTCCTTCCCTGCCTCCTTCTTCTTCCACAATGCCTCCACT GTTGCCAAGCATTCTGCTCCTCCTCTACACAAAGCCTTTCCCTTCCTGAA TCGGGCTTTAATATTTCCCGGGTCCTGGTCGAGGACGAATGAGGCATCTC GGAAAGCCTCCTCCCATCGTTCGAGTTTGAGGTGGGCCTGTGCGCGATTA TTGTACAGGATGAGGGAAAGCTTAGTGGTGGTGGTGGCGGTGCTGCTGCG GCTGGTATTGTGGTTGCTTTCGCTGAAATAAGTGGTGGTGGAACTGTTGC TGCTGTCGCTGTTGGCGGCATCGGCGGCAATCGCTTCAGTATAGTGCTTT ATGGCGGAATGGTAGTTTTTTTCTAACAAAGCATTGTTCCCTTGTTCTTT CAAAATATGAGCTCGGTCGTTTCTGTTGCTGCTGTGGTTTTTGCTGCTAC TACTTTTGGCACTGCTGCCATCCATCTTACTCGACCCCTGACGCTGCTGC TGCTGCTGCCACTGTGCTTTCGTCACGTATTTTCCGTCTCTTACTTCCTC GATGGGAAGACGTTGGAAGCCCGGGCGTACAGGAGGAGGCCAAATATAAC CGTCTTTCCCTCCTTCCTTCCCTCCCTCCGTCCCCGCTGCTCCTACTGCT GCCACCGCTACTGCCGCTGATTGTGGCCCAGGTGTGTTGGACGAGTCAGG GTTGTCCCTCTCCTCGCCTGCATCTTGCTCTTCAACCGCTACCTTTTCCT CCTTTTGCTCCACTAGCGAAATACCGGCAGAAACCGCGGGTATGTCGTCG ACAAGAGAGTCGGCAGCAGGAGGAGGGGGAGGAAGATGAGGAGGAGGAGA GGAACTGCTCGGTGGTGGCATTGCGGGCTCCCCCCCTCCCACTCTTTCTC CTTCCTCTTTCTTCCCGTCCTCCTTATCCATCTTCGCCAACAGCGCCATT GCTTCCTTTTCCTCCATTCCAGCCTTTCCACTTCCTCCTTTCATTTCTCC CGGAGCAGCAGCAGCCGCACAAACCACCAAGACCTGCCTCAGATCCCCTC GCGCTTTATCTCGTTTTTCCATTTTGTGCCTTATCATCCCTCGTCGAAGC CAAGCCTTGGCATATGAGGGCTCTCTATTTATGGCCATTGTGCAGTCCGC TTCAGCTTGGTCAAAAATTCCCTGTTTCAGCATGGCCAAGGCCCGATTCG CACACACCACAGCATTTTCAGGAGCGTGGCCGAGTGACAGAGTGTAAGCG GCGCGGGCTTCGGAATATTCCCCCTGCTTGAGTAGCTTGTTGCCGTCTTC CTTCTTTTGGGCGGCGAGGAGGGGACGGAGCGAGAGAGGGGTGTGGCGGA GGCATTCGCTCATGTCCCTTATTTCCTTTTCCGCAGCTTGGACCTTTTCG TCCTCGTCCTCGTCCTCACATTCCTCCTCCCTCTCTTTTACTGCCATGAT TGCTGTTGCTGATGCTTTGGTTCCTGCTGGTGCTGCTGTTGTTGCCGTTG CAATCGGTAGTGCTGTAGCACTGCCCGAATTCGTCGTCGTCATCGTAATA ATCGTCCTGGCAGACCGGGAAGGGGGACTACTCGACTCTACCACCACCAC TCCTGGTTCATTCCTCATTCTATTACTCCCAACAGCAACACCACGCTTCA TCCCCATCGCGGCATCTTTTCTTTCCATCTCATCACTCCACTCCTGCAAA ATCTCTTCCTCCTTGGCGACCTCTACCGGGCACGGCTGCGCCCGCAACGC CTTCACTTGGGCCTGGACTCGGGTAGGGGACAATAGCACTAGCCTGTCCA ATGTTTCCCGTTCTAAATCGGGGTAGACACCATCTTGTCTGCCCTGGAGC CGACGGAGGATGCAACGGATAACCTTGGGATCGTCGCAGTTTTGGATAAA ATCGAAGTCGAGCAGGTCGGTAGTAATGGGGATGGGGGAACGCTCATCGG CTGGGTACGGGGCCAACAGCAGTTCAGAAACAATATCCATGGCGTCCATT TGCTGCTGTTGCTCGGTGCCGAGATGAGGAGACTAGGAGACTGCCTGTAG AAAATGTACGTGTGTACTGGAGGAGTGTGAAAAGGGGGGGAGCATAGGAG GCAGTGAAGCAAGCTTTCGGGTGAGGGGTTATTCTCGAAAGTGGCACGTT TGAAGCGCTGTGGAAATGCGGAGGACGAGGAGGGGACGACTGCGTGCCAC GTGGGTGTGTTGTGGGGGCGTGAAAGCGGCATAAATAGCGCTTTGGCCTG GCTCAATTTTGGGTGTTGTTTCAGAAAGTTCCTTCAAGAAGCAACGCTCT TATTTCATGTCCTCGTATTCTACTTTACAATACTTTAAACGTCCTCCCAC CAACCACGCTTTCATCACAGCAACAATAACAAGCAAGGCCTCTTAACGTG CCAAGCTATGTCGCGCAGCCGCTCGCGTTCTTCCGAGAGGTAAGAGACGC TGATGAATATGCTTGCTGTTTGCTTTCTGGACATCCCACGAGACGCGCTC CTCGCACCCCACCCACCCACACTCCACATTTACGCACAATAAACGACACA GAGAAAGAGGTGGCAGTACCAGCGGCATGCGGCGACGACGGGACGATGAC CGTGACCGGGGGAGGGACCGAAATCACAAGAGGAGGGAGGACAGCGGGAG CCGCAGCAGGGAGCGCGATCGCGATGGACGCAAGAAGCACCAGCATAGAG ACAAGGAACGTGGAAAGGACAAGAAGAAGTATTCGTCGCGTCGCGATGGT TCTGGTGGAGGAGGAAGCGGCAGTGGCAAGCGTCGTCGGCGGTCACCCTC CTCATCCTCTTCCTTCTCGTCCTTGTCCCCTTCTCCCCTACGCAGCAAGA CCCAAACCGGAGGGAGAGCACATCCCAAACCTCCTTCCACCACCGCATCC ACAAGTGCTATGCTATATTCCCGTGCTTCTTTAAAAGAGCAACGGATCGT TGATGAGGAGGTGATTCGTCGGTTTGATGATCGAATCAAGGAGTTATTAG AAGAAAAAGTTTCTGTGTATTGCGAGTCCAGCGAGTTCAAAACCTTCCTC GACGAAATGAAGAAACGGAAACGGGAAGAGATGCTGAGTAAAATTGACCA GGACATTCGTGCAGAGCGTGAGGCAATGCTGGCGTTAGAAAGGGAGAAAG CCGAAGCAGCGGCGGAGGAGCAGCGGAAGTTGGATGAGGTACTGGAGGAG AATCGACGGAAGGTGGAAGAGCAGCGACGATTGGAGATGGAGGAAAAAGC AAGGCAGGACGAACAGAAACTGATGCAGATTCAGCGACGGCAACAACAGG AGGAGGAGGCAGAACGGCGGAGGGTGGTGAGTGTTGGAAGGGAAGGGGGG TAGAGGTTTGGTGACTTGCGCCATTAATTCTGAGTGAAATTGCGAAGAAG ACAAGCTGCCAATGCAGGCAGCACTTTGGGCCGCCTGCTTTGGAGGTGGA CTATTCTGTCTTATTCCTTTCAAATGTATGAGTGTCTGGGGAGCACTTGT CCCCCCTTTTCCTGTCTTTCCTCCTCCTCCTGCCCCCCCTTCCCCCCTCC TTCTATTTCTTTTCGCCTCGGAGGTAAGCGGCACCGAGCAACAGCAGAGC AGCAACAGTAGTAGCAGCATCAAGAAGGGGAAGTAGATTCCAGACCAGCA TCCATAAGGGGCATGCCTCGAGGAGATACCGTCTCAGGTGTCTCAGGGCG CTATCAGAGCTCGGTTTTGCTCTTGTGCTTCCGCGGTTTCAATTGTGCAG CTTGAGCAACGACGTGAAAGAAGATCACCGAGAAGACGAGGGCGCCCCTT TCGAACCTCCAAACGCGCAGACAGAATTGTGTCATGGCCTTCGCCGCTGG CTCCATCCTCACTGTGATCGTGTACACAGACAAATCACACACAGGCGTGC CTCCCCTTCTTGCCTCCCCTCCTCCCTATTCACCCTATTCATTTTCATTT TCACCTCTCCCCTGTTGTCTTCTCACGCGTGATCGTTTCTCACTCCTCTC TTTTCTTCCCCATGTTACTTTCCTCCCTACCTCTCCTTCCTCCTCTTCCT TCCTCCCTCCCCTCCCTATCCTCCCTTCGTGCCCCTTCCCCTTCTTTTCT GTTTGAGTAGGCAGAGGAGGTGGCCTTGCAGAAGGAGCAAGAGAAGATTC TCCGTCGACCACAGACGAAGATATCGCTGTCGCTAAAAAAGAAGGGGCCC TTGTTCTAGCCGCTGTCACCGCGAGCGCAAGTGGGGAGGGAAGCAACAAA AGCAAAGCGCGGGAGTGGAGGAAGTAGACAGGGTCTAGCTGCGATCCACA CGACGACCGCCCTGATGATAGCAGCGAGTTCTTGCGTGTAAAAAGGAAAG GGCGGGTGGAGGAGGAGGGACATGATAGCGGAGGTACACGAGAAGTAGGA GGATTTAGAGGAACAGAGCTGAGATTGCAAAAAAATGTCCGTTTGTG
back to top

Coding sequence (CDS) from alignment at chr20:402161..407857-

>NO20G01350.1 ID=NO20G01350.1|Name=NO20G01350.1|organism=Nannochloropsis oceanica|type=CDS|length=834bp|location=Sequence derived from alignment at chr20:402161..407857- (Nannochloropsis oceanica)
ATGTCGCGCAGCCGCTCGCGTTCTTCCGAGAGAGAAAGAGGTGGCAGTAC
CAGCGGCATGCGGCGACGACGGGACGATGACCGTGACCGGGGGAGGGACC
GAAATCACAAGAGGAGGGAGGACAGCGGGAGCCGCAGCAGGGAGCGCGAT
CGCGATGGACGCAAGAAGCACCAGCATAGAGACAAGGAACGTGGAAAGGA
CAAGAAGAAGTATTCGTCGCGTCGCGATGGTTCTGGTGGAGGAGGAAGCG
GCAGTGGCAAGCGTCGTCGGCGGTCACCCTCCTCATCCTCTTCCTTCTCG
TCCTTGTCCCCTTCTCCCCTACGCAGCAAGACCCAAACCGGAGGGAGAGC
ACATCCCAAACCTCCTTCCACCACCGCATCCACAAGTGCTATGCTATATT
CCCGTGCTTCTTTAAAAGAGCAACGGATCGTTGATGAGGAGGTGATTCGT
CGGTTTGATGATCGAATCAAGGAGTTATTAGAAGAAAAAGTTTCTGTGTA
TTGCGAGTCCAGCGAGTTCAAAACCTTCCTCGACGAAATGAAGAAACGGA
AACGGGAAGAGATGCTGAGTAAAATTGACCAGGACATTCGTGCAGAGCGT
GAGGCAATGCTGGCGTTAGAAAGGGAGAAAGCCGAAGCAGCGGCGGAGGA
GCAGCGGAAGTTGGATGAGGTACTGGAGGAGAATCGACGGAAGGTGGAAG
AGCAGCGACGATTGGAGATGGAGGAAAAAGCAAGGCAGGACGAACAGAAA
CTGATGCAGATTCAGCGACGGCAACAACAGGAGGAGGAGGCAGAACGGCG
GAGGGTGGTGAGTGTTGGAAGGGAAGGGGGGTAG
back to top
Synonyms
Publications