NO20G00150.1, NO20G00150.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO20G00150.1
Unique Name	NO20G00150.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2046
Alignment location	chr20:52171..57646 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr20	genome	chr20:52171..57646 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO20G00150.1 vs.
Match: EWM22218.1 (hypothetical protein Naga_100555g1 [Nannochloropsis gaditana])

HSP 1 Score: 305.1 bits (780), Expect = 5.600e-79
Identity = 165/267 (61.80%), Postives = 194/267 (72.66%), Query Frame = 0

Query:  301 IRVRHENTLFLLFQIYFAQRQIWTGDTEEERERSKRQAVEEVLPSLRFPRMSSDFLSDVVAHSSLFCDSPSASHLLIEALTYKSLSRLRQDRWICLVRNELRLEQRIPELKHNQEVGIKSTDSEQSILMHVYP-----KPVKSDVFTGTDVETCYSRLRDRVSLRRQMDFVSFSVDFPLQSCQAMNPTQAISSDVHECCGYLWTVQLVRLPDPATAPPHPPRSLPPPRPPGSNTADSTISPPPPPPSLPCSPRDRMGLWLHLLPMKP 563
            IRVRHENTLFLLFQIYFAQ++ W GDT EERE+S+R AVEEVLPSLRFPRMSSDFLSDVVAHSSLF +SPSA+HLL+EAL YKSLSRLRQDRWI LVRNELR+E +  + K NQ+ GIK   SE    +          PVKS+ F GTDVE+C+SRL+DR ++  Q  F++F+VDF LQ+C  + P Q + S VHECCGYLWTVQLVRLP  + APP  P+++ P        + ST   P        S  DRMGLWLHLLPMKP
Sbjct:   64 IRVRHENTLFLLFQIYFAQKEDWQGDTPEEREKSRRAAVEEVLPSLRFPRMSSDFLSDVVAHSSLFAESPSATHLLVEALAYKSLSRLRQDRWIRLVRNELRIEHKAAQFKINQKAGIKPCPSEVQAAVREAESASSFNPVKSEPFRGTDVESCFSRLQDRTAV-LQSQFITFAVDFSLQACLQLQPNQGLFSAVHECCGYLWTVQLVRLPIASIAPPSNPQAIRP--------SPSTCFTP--------SSSDRMGLWLHLLPMKP 313

The following BLAST results are available for this feature:

BLAST of NO20G00150.1 vs.

BLAST of NO20G00150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22218.1	5.600e-79	61.80	hypothetical protein Naga_100555g1 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO20G00150	NO20G00150	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00150.1	NO20G00150.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO20G00150.1.cds1	NO20G00150.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds2	NO20G00150.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds3	NO20G00150.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds4	NO20G00150.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds5	NO20G00150.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds6	NO20G00150.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds7	NO20G00150.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds8	NO20G00150.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds9	NO20G00150.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds10	NO20G00150.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds11	NO20G00150.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds12	NO20G00150.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds13	NO20G00150.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds14	NO20G00150.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds15	NO20G00150.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds16	NO20G00150.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds17	NO20G00150.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO20G00150.1.cds18	NO20G00150.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr20:52171..57646+
coding sequence from alignment at chr20:52171..57646+

mRNA sequence

>NO20G00150.1 ID=NO20G00150.1|Name=NO20G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=2046bp
ATGGATGGCGGAGGTGCTGATGACGTTCGGGATGACGAGTCTGTCACCAA
CATGAGCGGCAACTCGACCCGGTACACTCGCCCTTTGATCAGCAAGAACC
AGTACTATGACCAAGTCGCTGCTCTCGACCTCAATTTTGCGCTCGACAAT
CCTATCTATGCGGATAAGGAGATACACATTGTCTGGGAGGAGGACCACCC
GCAGTGGCTGGCCTTGGCGCGAGAGGAGTGCGAGGGCGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAAAAGAAAGAGGAGGAGGAAGAAAAAGAT
GGCCTGCGGGAAGAGATTGGGAAAGGAAGGGGCAAGCACTGGCGAGGGCG
AGGAGGAGGAGGGCGACATCGGAAGAGGATTCGGCGGGAGGATCTGCGAC
CGCCGTTACGGAAGCTCAAGGTCGTCTCCGCCTCCCTAGCCGCGCGGTCC
CGCTTTTTTAAATCCATGTTTGAACTCCCGTTTCGTGAGAAACGTGCTGG
GCGCATACTTTATCTCGCGGCGAGTAGCAAAGAGGATGCCTCCATTGCGT
ACGCATGCATCTCGGGCCTCCATCAACGCGAGTTCCCCATCTACACCTCC
GACGTCGTCACGCTGGTCGACATGCTTGCCAAGGCGCAGGAGTACATGGC
CGAGGAGTCGGTCTCCGTCCTCGCTCGAGAGATCGGAACGCGCGCTTGTC
CAAGCCGGGCCCTGGACACGGCCTCAGGGCCAGGTGCCGAGGCTTCCAAA
TCGCCCGCCCTGTCACTGGAGGAGTTGATGTATGTCTACGAGACACTGCC
CGTGGGCGTGGAGACCAACCCGCTGTACGAGACCATGATCCGCAAGCTTG
ACAAGCTCCTTGTCTCCTACTTCCCCACGCCGGACCTGTACTGCCAGGGC
ATTCGGGTCCGGCACGAGAACACCCTCTTCCTCCTCTTCCAGATTTATTT
TGCTCAAAGGCAGATCTGGACTGGCGACACTGAGGAAGAGAGGGAGAGGT
CAAAAAGGCAGGCTGTGGAGGAGGTCCTCCCTTCCCTCCGCTTCCCCCGC
ATGTCGAGCGATTTCCTCTCGGATGTGGTGGCTCATTCTTCCCTCTTCTG
CGACTCTCCCTCCGCCAGCCACCTCCTGATCGAAGCCCTCACATACAAGA
GCCTCAGCCGCCTGCGTCAGGACCGCTGGATTTGTCTTGTCCGGAATGAA
CTCCGCCTAGAGCAACGCATCCCAGAGCTAAAGCACAACCAAGAGGTCGG
GATCAAATCGACGGATTCCGAACAGAGTATTCTTATGCACGTCTACCCCA
AGCCCGTGAAATCGGACGTCTTCACCGGCACGGACGTGGAGACGTGCTAT
TCCCGCCTCCGAGATCGAGTGTCATTGCGCCGGCAGATGGATTTCGTCTC
CTTCTCCGTTGATTTCCCTCTGCAGAGTTGCCAAGCTATGAATCCCACGC
AGGCCATCTCCTCGGACGTGCACGAATGCTGCGGTTACCTCTGGACGGTT
CAACTCGTCCGTCTACCCGACCCGGCGACTGCTCCGCCTCACCCTCCTCG
CTCCCTTCCTCCCCCCAGACCTCCTGGCTCGAACACCGCCGACAGCACCA
TCTCTCCTCCCCCCCCTCCTCCCTCGCTCCCTTGCAGCCCTCGGGATAGG
ATGGGGCTGTGGCTGCATCTGCTGCCAATGAAGCCGCTTCCTACCTCTCC
CTTCCCTCGATCTAAGCCCCGCGGGGTGGCCTCGATGGTACAGATCAAGG
TCAAGACAAAGGCCGGCTACTTCAACATGCTGCCAGACCACTGCCACACC
TGGACCGTCTTCGGCGGCAAGGAAGGTAAGGACAACATCAAATTTCCGTA
TTTCCACCCTGAGAATTCGCCTCCTCTCTCGGAGGCCGACCTCTTCCGGC
GGGAAAGGGAGGGAGTGAGGGAGTGGTCGCAAATCGTGAGTGCCGATGGG
GGGCTCTTCCTGGCCAAGCCGGAGGAGGGACAGGGCCACCAGGGGATGAG
AGCCAGGTGTATGACGGTTAAGATCTGTGTGCGTACGGAAGATTAG

protein sequence of NO20G00150.1

>NO20G00150.1-protein ID=NO20G00150.1-protein|Name=NO20G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp
MDGGGADDVRDDESVTNMSGNSTRYTRPLISKNQYYDQVAALDLNFALDN
PIYADKEIHIVWEEDHPQWLALAREECEGEEEEEEEEEEEEKKEEEEEKD
GLREEIGKGRGKHWRGRGGGGRHRKRIRREDLRPPLRKLKVVSASLAARS
RFFKSMFELPFREKRAGRILYLAASSKEDASIAYACISGLHQREFPIYTS
DVVTLVDMLAKAQEYMAEESVSVLAREIGTRACPSRALDTASGPGAEASK
SPALSLEELMYVYETLPVGVETNPLYETMIRKLDKLLVSYFPTPDLYCQG
IRVRHENTLFLLFQIYFAQRQIWTGDTEEERERSKRQAVEEVLPSLRFPR
MSSDFLSDVVAHSSLFCDSPSASHLLIEALTYKSLSRLRQDRWICLVRNE
LRLEQRIPELKHNQEVGIKSTDSEQSILMHVYPKPVKSDVFTGTDVETCY
SRLRDRVSLRRQMDFVSFSVDFPLQSCQAMNPTQAISSDVHECCGYLWTV
QLVRLPDPATAPPHPPRSLPPPRPPGSNTADSTISPPPPPPSLPCSPRDR
MGLWLHLLPMKPLPTSPFPRSKPRGVASMVQIKVKTKAGYFNMLPDHCHT
WTVFGGKEGKDNIKFPYFHPENSPPLSEADLFRREREGVREWSQIVSADG
GLFLAKPEEGQGHQGMRARCMTVKICVRTED*

mRNA from alignment at chr20:52171..57646+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO20G00150.1 ID=NO20G00150.1|Name=NO20G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=5476bp|location=Sequence derived from alignment at chr20:52171..57646+ (Nannochloropsis oceanica)
ATGGATGGCGGAGGTGCTGATGACGTTCGGGATGACGAGTCTGTCACCAA
CATGAGCGGCAACTCGTACGTACATACCACTCGGCCTCGTCCCTTCCCCC
ACTTGCCCCCTCCTTCGCCACGCCATTCTTACTTCCTCTTCTCCCATTCT
TACTTCCTCTTCTCCGAGTCCTTCCCGATCGCTATGCTCTGTGGCTTCAT
TGCCTTGACCTTATGATCAACCGGACCACTGGTCCACTCACATAGCCCTC
CCTCCTTTCCTTCCCCCCCCCCCCCGTTTGCAGGACCCGGTACACTCGCC
CTTTGATCAGCAAGAACCAGTACTATGACCAAGTCGCTGCTCTCGACCTC
AATTTTGCGCTCGACAATCCTATCTATGCGGATAAGGAGATACACGTACG
TCCTCTCATTCCTTATTTTTCGCTCCTTCGGACGCTCGGTGCTTGATGCG
GGGCTTATTTTTGGGATGGTTAATAGAGATTCCAGAAGAAATTGGAGAGT
AAGGGGAGAAAGGGAGAGAGAGCCGTTGGCGAAGCAAGACGCATGCTGAG
CCTTCCCAGGTCGAGTATTGTCACGAGAAACATCATAGCTCCAGGAAGGA
GGCACCGACGTTGGATGTTCCTTGATAGGATGAGAATTGACAGAACAGGA
GATAGACTTCTTCAAGTGGAAGACATCCGGGTCGTCTGAGTGTTCATGTT
GTTTCCTCCGGGAGGATGAATGAATGATGTCTAACTTTTTCTTTACCTAC
TTTCCCCCCTCCTTCCCTCCCTTCCTCCCTCTCTCCCTCATGTAGATTGT
CTGGGAGGAGGACCACCCGCAGTGGCTGGCCTTGGCGCGAGAGGAGTGCG
AGGGCGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAAAGAAAGAG
GAGGAGGAAGAAAAAGATGGCCTGCGGGAAGAGATTGGGAAAGGAAGGGG
CAAGCACTGGCGAGGGCGAGGAGGAGGAGGGCGACATCGGAAGAGGATTC
GGCGGGAGGATCTGCGACCGCCGTTACGGAAGCTCAAGGTAAGGGTGGGA
GGGAGGGATGGAGGGCGAGCGAGCGGGAGGGAAGAAATAAGAAAAGTGTC
TACAAATATTGTGACCTCGATGTGAATATGGCATGGCCCTCCCTCCCTCC
CTCCCTCCCTTCCTCAGGTCGTCTCCGCCTCCCTAGCCGCGCGGTCCCGC
TTTTTTAAATCCATGTTTGAACTCCCGTTTCGTGAGAAACGTGCTGGGCG
CATACTTTATCTCGCGGCGAGTAGCAAAGAGGGTGAGTGCGAGGGGAAGG
GAGAGAGGAAGGGAGGGAGGGAGGGAGTGTTGAAGTCAAGCAGAATTTGA
GTCGAAGAGAGGGGTCGGTGCACGTCCACGCGCAACGTCGAGCCTTCCTC
TCTCACTTGCATCCCTATTTTATATTCCATGTACACATACACACACACCC
ATGCTCCTTGAAACGATGGCTGTCTGTGGCTCCAGATGCCTCCATTGCGT
ACGCATGCATCTCGGGCCTCCATCAACGCGAGTTCCCCATCTACACCTCC
GACGTCGTCACGCTGGTACGCCCCCCTCCCTCCCTCCCTCCTTCCCTCCC
TCCCTCCCTCCTCCCTCCCTCCCTCTCATTTCCCCTTTTCATCGACACTG
GGATCCGGCTTTGACTTACCCCCCTCCCCTCCCCTTCCCTCTCCCTCCTC
CCTCCTCTCCCTCCTCCTTCTTTTCCTTCTTCCCCTCCCTCCCCTCCCCT
TCCCTCTCCCTCCTCCCTCCTCTCCCTCCTCCTTCTCTTCCTTCCTCTCC
TTCTCCTCCCCCCTTCCCTCCCTCCCTCAGGTCGACATGCTTGCCAAGGC
GCAGGAGTACATGGCCGAGGAGTCGGTCTCCGTCCTCGCTCGAGAGATCG
GAACGCGCGCTTGTCCAAGCCGGGCCCTGGACACGGCCTCAGGGCCAGGT
GGGGAAGGGAAGGAGGAAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGA
AGGAGGGAGGGAGGATGGGAGGGAGGGAGGGAACACCCGTGGTAGCGATT
ACGAAAAACCCGGCAGATTTAAATCTTTAGGCTATGTTTTATTACATCCT
TCTTGTTCTGAACTCCCTTCCTCCCTCATTCCCTCCTTCCTACCCTCCCC
CCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCTCGGTCCAGGTGCCGAGGCTTCCAAATCGCCCGCCCTGTCAC
TGGAGGAGTTGATGTATGTCTACGAGACACTGCCCGTGGGCGTGGAGGTG
AGATGGGAGGGAGGGAGGGAGGGAGGGAGGAAGAGAGTGAAGAGAGAGAG
GAATTTCCCGTCATGAGTGATATGCTAAGCGACTTGTGCGTCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCAGACCAACCCGCTGT
ACGAGACCATGATCCGCAAGCTTGACAAGCTCCTTGTCTCCTACTTCCCC
ACGGTATGTCCTCCCTCCCTCCCTCCCTCCTCCTCCTCCTCTCTTTTCCC
CTCACCAGCCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCC
CTCCCTTCCTCCCTCCCTCCCTCCTTCTTTCCCTCCCTCCTCCTCCTCTC
TTTCCCCCTCACCAACCACCCCTCCCTCCCTCCCTCCCTCCAGCCGGACC
TGTACTGGTCCATCTCCTCCCCCTTCAACCAGCCCCTCTCCTACAAAACC
ATGCGCCTCACCTCGCAGGAGGAAGAGGCACAGAGCGCTCAGGGCGCGCC
GGCCGCCATTCGTCCTCCCCCTCCCCCTCCCACCCCCTCCATACACTCTC
CGTCCGCACGCTCAAGCACCTCCTTGCCAGCCAGGGCATTCGGGTACCTC
CCTCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTGCGTCAA
ATGCCTCCTTCGTGACGAGGATCAAGCCTCGCACGACAGACGAGGCAGAA
CTCTCATCTACCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTAGG
TCCGGCACGAGAACACCCTCTTCCTCCTCTTCCAGATTTATTTTGCTCAA
AGGCAGATCTGGACTGGCGACACTGAGGAAGAGAGGGAGAGGTCAAAAAG
GCAGGCTGTGGAGGAGGTGAGGAGGGAGGGGAGGGCGGGAGGGAAGTAGA
GGAGGGGCAGAGGAGCAGGTGAGGGAGGGCGGGCGGGAGGGAGGGAGGGA
AGGAGGACGGGAGGGACGGACGGAAAACTTAGTCTTCTTACAATGCCCCT
TGCCTCCCTTCCCCCTCCCTCCCTCCCTCCCTCCCGCCCGCCCTCCCTCA
GGTCCTCCCTTCCCTCCGCTTCCCCCGCATGTCGAGCGATTTCCTCTCGG
ATGTGGTGGCTCATTCTTCCCTCTTCTGCGACTCTCCCTCCGCCAGCCAC
CTCCTGATCGAAGCCCTCACATACAAGAGCCTCAGCCGCCTGCGTCAGGC
ACGTCCCACTCACCCCCTCCGATGTCCTCCCTCCCTCCTTCTCCCTCCCT
CCTCATCAAAAGAAACTTTCTTCCTTCAGGCTTCAGTTCCATACAGCGAT
TCTCACTCTGGTTTCCGCCTTCCTCCCTCCTTCCCTCCTTCCTTCCTTCA
CTCCCTTCCTCCCTCCCTTCCTCCTTTTCCAATCAACAGGACCGCTGGAT
TTGTCTTGTCCGGAATGAACTCCGCCTAGAGCAACGCATCCCAGAGCTAA
AGGTACACCTTTCCAGTCCTCCCTCCTTCCCTCCCTCCCTCCCTTCCCTC
CCTTCTTCCCTCCCTACCTCCCTCCCTCGACCCGTCTCCCCCCCTCCCTC
CCTCCCACCTTCCCTCACTCCCTCTCCTCCGCCACCCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCTCCCTTTTTAGCACAACCAAGAGGTCGGGATCAA
ATCGACGGATTCCGAACAGAGTATTCTTATGCACGTCTACCCCAAGCCCG
TGAAATGTGAGTCAATTTGCCCTTCCTCCCTCTCTCCCTCTCTTTCTTCC
CTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCAAGATCAACGGCTCATCCC
AGCCTTGAGGCTCCAAGAAGGCAAGAAGCATCCTCCTGACTCCCTCCTTT
CCCCCCCTCCTTCCTCCCTCCCTCCTTCCCTCCCCGGCAGCGGACGTCTT
CACCGGCACGGACGTGGAGACGTGCTATTCCCGCCTCCGAGATCGAGTGT
CATTGCGCCGGCAGATGGATTTCGTCTCCTTCTCCGTTGATTTCCCTCTG
CAGAGTTGCCAAGCTATGAATGTGCGTACACTTTCCTCCCTCCCTCCCTC
CCTGCTCATGCATTCATCATTGAATTTGGGGTAAATCATTCACTCTCTCT
TCTTCCGTCCCTCCCTCCCTACCTCCTTTCTTCCCTCCCTCGTCATCTCA
CCCAAGCCATCCCATTTGACCTCCACGAATGCTGACCCTCTCCCTCCCTC
CCTCCCTCCAGCCCACGCAGGCCATCTCCTCGGACGTGCACGAATGCTGC
GGTTACCTCTGGACGGTTCAACTCGTCCGTCTACCCGACCCGGCGACTGC
TCCGCCTCACCCTCCTCGCTCCCTTCCTCCCCCCAGACCTCCTGGCTCGA
ACACCGCCGACAGCACCATCTCTCCTCCCCCCCCTCCTCCCTCGCTCCCT
TGCAGCCCTCGGGATAGGATGGGGCTGTGGCTGCATCTGCTGCCAATGAA
GCCGCTTCCTACCTCTCCCTTCCCTCGATCTAAGCCCCGCGGGGTGGCCT
CGATGGTACAGATCAAGGTAGGAGAGGGAATGGGAGGGAGGGAGGGAAGG
GCTGGTGGACGGGTGCATGCGATAAGTAATAGGGAAGAAAACGTGTCCAG
CCCCTACTTCCCTCTCTTTGAAATGATATGTGCTGGAGACAGCAGTGGTT
CATGGCTCGTGCTCACCCCATCTCCTCCCTCCCTCCCTCCCTCCCTCCCC
CTTTCCCCACCTCTCCTCCGTAGGTCAAGACAAAGGCCGGCTACTTCAAC
ATGCTGCCAGACCACTGCCACACCTGGACCGTCTTCGGCGGCAAGGAAGG
TGGGCAGTGGAGGGAGGAAAGAAGGAAGGAAAAGTGGGTAGGGCGGAGGA
GGAGAAAGGACGCTTCCAAAAGTAGAAAGAAAGAAAGAATTGAATGTCTC
TCTTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCAGGTAAGGACAACATCAAATTTCCGTATTTCCACCCTGAGAATTCGC
CTCCTCTCTCGGAGGCCGACCTCTTCCGGCGGGAAAGGGAGGGAGTGAGG
GAGTGGTCGCAAATCGTGAGTGCCGATGGGGGGCTCTTCCTGGCCAAGCC
GGAGGAGGGACAGGGCCACCAGGGGATGAGAGCCAGGTGTATGACGGTTA
AGATCTGTGTGCGTACGGAAGATTAG

Coding sequence (CDS) from alignment at chr20:52171..57646+

>NO20G00150.1 ID=NO20G00150.1|Name=NO20G00150.1|organism=Nannochloropsis oceanica|type=CDS|length=2046bp|location=Sequence derived from alignment at chr20:52171..57646+ (Nannochloropsis oceanica)
ATGGATGGCGGAGGTGCTGATGACGTTCGGGATGACGAGTCTGTCACCAA
CATGAGCGGCAACTCGACCCGGTACACTCGCCCTTTGATCAGCAAGAACC
AGTACTATGACCAAGTCGCTGCTCTCGACCTCAATTTTGCGCTCGACAAT
CCTATCTATGCGGATAAGGAGATACACATTGTCTGGGAGGAGGACCACCC
GCAGTGGCTGGCCTTGGCGCGAGAGGAGTGCGAGGGCGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAAAAGAAAGAGGAGGAGGAAGAAAAAGAT
GGCCTGCGGGAAGAGATTGGGAAAGGAAGGGGCAAGCACTGGCGAGGGCG
AGGAGGAGGAGGGCGACATCGGAAGAGGATTCGGCGGGAGGATCTGCGAC
CGCCGTTACGGAAGCTCAAGGTCGTCTCCGCCTCCCTAGCCGCGCGGTCC
CGCTTTTTTAAATCCATGTTTGAACTCCCGTTTCGTGAGAAACGTGCTGG
GCGCATACTTTATCTCGCGGCGAGTAGCAAAGAGGATGCCTCCATTGCGT
ACGCATGCATCTCGGGCCTCCATCAACGCGAGTTCCCCATCTACACCTCC
GACGTCGTCACGCTGGTCGACATGCTTGCCAAGGCGCAGGAGTACATGGC
CGAGGAGTCGGTCTCCGTCCTCGCTCGAGAGATCGGAACGCGCGCTTGTC
CAAGCCGGGCCCTGGACACGGCCTCAGGGCCAGGTGCCGAGGCTTCCAAA
TCGCCCGCCCTGTCACTGGAGGAGTTGATGTATGTCTACGAGACACTGCC
CGTGGGCGTGGAGACCAACCCGCTGTACGAGACCATGATCCGCAAGCTTG
ACAAGCTCCTTGTCTCCTACTTCCCCACGCCGGACCTGTACTGCCAGGGC
ATTCGGGTCCGGCACGAGAACACCCTCTTCCTCCTCTTCCAGATTTATTT
TGCTCAAAGGCAGATCTGGACTGGCGACACTGAGGAAGAGAGGGAGAGGT
CAAAAAGGCAGGCTGTGGAGGAGGTCCTCCCTTCCCTCCGCTTCCCCCGC
ATGTCGAGCGATTTCCTCTCGGATGTGGTGGCTCATTCTTCCCTCTTCTG
CGACTCTCCCTCCGCCAGCCACCTCCTGATCGAAGCCCTCACATACAAGA
GCCTCAGCCGCCTGCGTCAGGACCGCTGGATTTGTCTTGTCCGGAATGAA
CTCCGCCTAGAGCAACGCATCCCAGAGCTAAAGCACAACCAAGAGGTCGG
GATCAAATCGACGGATTCCGAACAGAGTATTCTTATGCACGTCTACCCCA
AGCCCGTGAAATCGGACGTCTTCACCGGCACGGACGTGGAGACGTGCTAT
TCCCGCCTCCGAGATCGAGTGTCATTGCGCCGGCAGATGGATTTCGTCTC
CTTCTCCGTTGATTTCCCTCTGCAGAGTTGCCAAGCTATGAATCCCACGC
AGGCCATCTCCTCGGACGTGCACGAATGCTGCGGTTACCTCTGGACGGTT
CAACTCGTCCGTCTACCCGACCCGGCGACTGCTCCGCCTCACCCTCCTCG
CTCCCTTCCTCCCCCCAGACCTCCTGGCTCGAACACCGCCGACAGCACCA
TCTCTCCTCCCCCCCCTCCTCCCTCGCTCCCTTGCAGCCCTCGGGATAGG
ATGGGGCTGTGGCTGCATCTGCTGCCAATGAAGCCGCTTCCTACCTCTCC
CTTCCCTCGATCTAAGCCCCGCGGGGTGGCCTCGATGGTACAGATCAAGG
TCAAGACAAAGGCCGGCTACTTCAACATGCTGCCAGACCACTGCCACACC
TGGACCGTCTTCGGCGGCAAGGAAGGTAAGGACAACATCAAATTTCCGTA
TTTCCACCCTGAGAATTCGCCTCCTCTCTCGGAGGCCGACCTCTTCCGGC
GGGAAAGGGAGGGAGTGAGGGAGTGGTCGCAAATCGTGAGTGCCGATGGG
GGGCTCTTCCTGGCCAAGCCGGAGGAGGGACAGGGCCACCAGGGGATGAG
AGCCAGGTGTATGACGGTTAAGATCTGTGTGCGTACGGAAGATTAG

Synonyms

Publications