NO17G02920.1, NO17G02920.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G02920.1
Unique Name	NO17G02920.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2843
Alignment location	chr17:852484..856596 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:852484..856596 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G02920.1 vs.
Match: EWM24112.1 (Protein kinase, catalytic domain protein [Nannochloropsis gaditana])

HSP 1 Score: 255.4 bits (651), Expect = 4.800e-64
Identity = 270/598 (45.15%), Postives = 336/598 (56.19%), Query Frame = 0

Query:   69 GVRNEEGLQ--LDSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSARLVFCPASSLLTHPSSFSVISCAQGSDRWAEPLRLSPPSLGEERLRQVWVPERHIFPPSLPPSLSLCSAR----PCLDGSSERKTVLTRASLAARGLLVTLPLDSPSRPEERGREEGKEGG------GAREH--LSPLVKTGEGHLYTFSLPSSSSPFVLKRYHKHAAGKALKELHALLLLSA-----PSSLPPSLPPFLVALRGVVWE--------EGKGGKEGGGVSKPSALVLEQVLLNGIEAPHRVDLHSFLAYRRSQIQQQQQSLALPPALPLSLPHLLALAEALGDALGFLHERGLCHKDLHSGNILLTHLEELDVPPSAASAAATTLTPLPASLP-RPLLGIKVADFGLSCPFNPLRAQLDMRALAYVLMEAAHDGVDRSSMEKKDEGPEEGRE--EGREELNKEKEWPLPARLTAKWSLSFPPPPEQGPFFSMHDLPPSLLSALDPVFHGAFGEGGKEGKREGGSGEG-------QQWTPLGVAMWARR 630
            G   EE  Q  ++ S  +++S  S S S  S+SSSS SS  SSS SSS        +S   +  ++ +  + + +S   S     +   S  S        R V+ P    L +PS+ +  S +  S   A      P      RL            PSL  S   CS      P  DG   R   +T + L+ARGLL +LP+   +R EE  R +G+EGG      G  E     PL +TGEG LYTFS+    S +VLKRYHKHAAGKALKEL  LL LSA     PSS P   PPFL +L GVVW         EG+ G +    S+PSALVLE+VLLNG +  +RVDL +FL +RR     + Q  +LPP LPL LPHLL LAEALG+AL F+H +GLCH+D+HSGNILL+H EE  +P S +      + PL  S P RPLL IK+ADFGL+C FNPLRA LD+RALAYVL EAAHDGVDR+      EG  E  +  E  +   ++K+WPLPARLTAKWSLS P P EQ  FFSMHDL P    +L P+  G FG GG++ ++    GE         QWTPLGVA WARR
Sbjct:    7 GREGEEAQQELVEKSLPAAASRKSFSCSQISTSSSSPSSIPSSSPSSSPLRLVYCPASCFFTHPATFTVLACAENSDEWSLPLRLTRPRSGLSEEDRQERLRQVWIPERHTLPYPSTLTSSSSSLSSCSAAINAPHGPTPSSSLRL------------PSLRASTPSCSLPTPLPPSPDGQGTRGERITPSFLSARGLLFSLPIPRSTRREEIERRDGREGGRVGGMEGGNEDKVFHPLAETGEGKLYTFSV--GHSHYVLKRYHKHAAGKALKELAVLLHLSASIRACPSSAPSVHPPFLASLCGVVWNHNNTEAGGEGESGSKEEKASRPSALVLERVLLNGQKTENRVDLRAFLVHRR-----EAQEASLPPFLPLPLPHLLTLAEALGEALAFVHGKGLCHRDVHSGNILLSHFEEDTLPISGS-----VVNPLTLSCPQRPLLRIKLADFGLACSFNPLRAWLDLRALAYVLTEAAHDGVDRTGGFGDTEGASERLKQWEDFDPSERKKQWPLPARLTAKWSLSLPSPAEQVSFFSMHDLSPYFRRSLAPLLLGVFG-GGEDRRQPAEGGEKGEKGRKCTQWTPLGVAAWARR 579

The following BLAST results are available for this feature:

BLAST of NO17G02920.1 vs.

BLAST of NO17G02920.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24112.1	4.800e-64	45.15	Protein kinase, catalytic domain protein [Nannochl...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G02920	NO17G02920	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G02920.1	NO17G02920.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G02920.1.cds1	NO17G02920.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds2	NO17G02920.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds3	NO17G02920.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds4	NO17G02920.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds5	NO17G02920.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds6	NO17G02920.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds7	NO17G02920.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G02920.1.cds8	NO17G02920.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:852484..856596+
coding sequence from alignment at chr17:852484..856596+

mRNA sequence

>NO17G02920.1 ID=NO17G02920.1|Name=NO17G02920.1|organism=Nannochloropsis oceanica|type=mRNA|length=2843bp
ACCACAGGCCGGATCACCACCATGCCGCCCGGGTGACGTCCAACCTCCCC
CCACTCTGCTGCCCCGCTTAAAGGGCATGATAAACCGCAAGAAAGTCAAG
GGCAGTCCAGCCTTGTCCTGTCCGTCCGCGTCCTTTCCGTCATCTTTTCC
TCTGGATGCAGCCTTCTCCCTGTCCCTTCTCCAGTCGTCCCGGTGCCTCA
CCCTTGCCCTCCCCTTCCCTCCCTCCCTCAGCCTGTCCCACCTTGCTTCG
TCTTCCTCGTCGTTTTATTCTTCCTGGGTGACGGGAGAGAGGGTAGAGGG
GGCGTTAGGTCTGCCTCCTTCCTCCTCGGCCTTGGCATCCTTCGTTGCTG
TCCCAATGGAGAGGAAGGAGGGAGTGAAAGAGGGAGGGGTATGTGCGTTG
TGGAACCCAGCATTGGACGTATGCCTTGCCCCAAAAGCGGCGGTAACAAA
GGACGGAGGAGCTGCTGGGTGGGAGATGGGGCTGAGAGATCGGGAGGACA
GGAGGCAGACGGAGGAAGGAGGAGGTGGAGGGAGGAGAGGGTGCGGGGGA
TGGACATGGCGGGAGGGAGGGCGGGTGGTGTGGGTTGAGGAAGGAGAGGA
GGAACGGGTGCTGGGTTGGAAGGAGAGGGAAGGAGGAAGGGAAGGGGAGT
GGAGGTTGCTGACGCCGGCTGAGGAGGAAAAGGAGGAGAAGAAGAAGGGC
TGTGGTGACAGCTGTCGTCTCGAGGTAGTGCGACACGAATGGATGGGCCA
CGACGACGGCGGTCCCTTCCGCCTCGTGTGCGCCTCGTCCCTGCGCTGCC
TTTGCGACTGCACAGACGGCAACGCCAAGGCACGTGCCCTCCCTCCCTCC
CTTCCTTCCTCCCTCAGATCGTCCTTGCCGCCCCATCGGTGCTACTGAGA
TGAAGGAGAGAACGTTTTTCCCACGTACACCACCCACATCCCACAATACC
TCCCTCCATACCCCTTCCCTCCTTCCTCTCCTCCCTCCCTCCCTCCTCCC
TCAGGTCCTCTGTCTGTGCCGTCGCCACCTCTCCGACGGCGGCAAGTGGG
AGTACAGGCCTTGGGTTCAAGCGCTCGTGGAAAGGCGGAGTGGGAGGGCC
GTGGGTGTGAGGAACGAGGAAGGGCTGCAGCTTGACTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCGCC
CGCCTCGTTTTCTGTCCAGCCTCCTCCCTCCTCACCCACCCTTCCTCCTT
CTCCGTCATTTCCTGTGCCCAAGGCAGCGATCGATGGGCTGAGCCTCTCC
GTCTCTCCCCTCCCTCTTTAGGGGAAGAGAGGCTGCGGCAGGTTTGGGTG
CCGGAACGCCATATCTTTCCTCCCTCCCTCCCTCCCTCCCTCTCTCTGTG
CTCTGCTCGTCCTTGTCTTGATGGAAGCAGCGAGAGGAAGACGGTCCTCA
CCCGCGCCTCCCTTGCCGCCCGCGGTCTGCTCGTCACCCTCCCTCTCGAC
AGCCCTTCCAGGCCCGAGGAGAGAGGGAGGGAGGAAGGGAAGGAGGGGGG
GGGGGCGAGAGAGCACCTCTCGCCTCTTGTCAAGACGGGGGAGGGTCATC
TTTACACCTTCTCGCTTCCCTCGTCTTCCTCCCCCTTTGTCCTCAAGCGC
TACCACAAGCACGCTGCAGGCAAGGCCCTCAAAGAACTCCACGCGCTGCT
CCTGCTCTCTGCCCCCTCCTCCCTCCCTCCCTCCCTCCCGCCCTTCCTAG
TTGCCTTGCGAGGGGTGGTGTGGGAGGAGGGGAAGGGCGGGAAGGAGGGG
GGGGGGGTTTCGAAGCCTTCTGCCCTGGTATTGGAGCAAGTGCTGCTGAA
TGGTATAGAGGCCCCGCACCGCGTGGATCTGCACTCCTTCCTTGCATATC
GTCGCTCACAAATACAGCAGCAGCAGCAGTCCCTTGCCCTCCCTCCCGCC
CTCCCTCTCTCCCTCCCTCACCTCCTCGCGCTGGCCGAGGCCCTTGGGGA
CGCCCTCGGGTTTCTCCACGAAAGAGGATTGTGCCACAAGGACCTGCACA
GCGGGAATATCCTCCTCACTCACTTGGAGGAGCTCGACGTCCCACCCTCA
GCAGCATCAGCAGCAGCAACAACATTAACACCCCTCCCTGCCTCCCTCCC
TCGCCCCCTCCTTGGCATCAAGGTGGCGGATTTTGGTCTCTCCTGCCCTT
TCAATCCCCTGAGGGCCCAGCTGGACATGCGGGCGCTGGCCTACGTGCTG
ATGGAGGCGGCGCACGATGGGGTGGATCGCTCCTCAATGGAGAAGAAAGA
CGAAGGACCTGAGGAAGGGAGGGAGGAAGGGAGGGAGGAGCTGAACAAGG
AGAAGGAGTGGCCACTGCCAGCCCGTCTGACGGCCAAATGGTCTCTCTCC
TTCCCTCCCCCGCCCGAGCAAGGTCCTTTCTTCTCCATGCACGACCTCCC
TCCCTCCCTCCTTTCCGCCCTCGATCCCGTCTTTCACGGGGCGTTTGGGG
AGGGGGGGAAGGAAGGAAAGAGGGAGGGAGGAAGTGGGGAAGGGCAGCAA
TGGACACCGTTAGGGGTGGCGATGTGGGCGCGGAGGGCGGGAGGGAGGAA
GGGAGGAAAGGAGAGAGGGGCAGGCGTGGAAATGACAGGCTAA

protein sequence of NO17G02920.1

>NO17G02920.1-protein ID=NO17G02920.1-protein|Name=NO17G02920.1|organism=Nannochloropsis oceanica|type=polypeptide|length=648bp
MKERTFFPRTPPTSHNTSLHTPSLLPLLPPSLLPQVLCLCRRHLSDGGKW
EYRPWVQALVERRSGRAVGVRNEEGLQLDSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSARLVFCPASSLLTHPSSFSVISCAQGSDRWAEPL
RLSPPSLGEERLRQVWVPERHIFPPSLPPSLSLCSARPCLDGSSERKTVL
TRASLAARGLLVTLPLDSPSRPEERGREEGKEGGGAREHLSPLVKTGEGH
LYTFSLPSSSSPFVLKRYHKHAAGKALKELHALLLLSAPSSLPPSLPPFL
VALRGVVWEEGKGGKEGGGVSKPSALVLEQVLLNGIEAPHRVDLHSFLAY
RRSQIQQQQQSLALPPALPLSLPHLLALAEALGDALGFLHERGLCHKDLH
SGNILLTHLEELDVPPSAASAAATTLTPLPASLPRPLLGIKVADFGLSCP
FNPLRAQLDMRALAYVLMEAAHDGVDRSSMEKKDEGPEEGREEGREELNK
EKEWPLPARLTAKWSLSFPPPPEQGPFFSMHDLPPSLLSALDPVFHGAFG
EGGKEGKREGGSGEGQQWTPLGVAMWARRAGGRKGGKERGAGVEMTG*

mRNA from alignment at chr17:852484..856596+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G02920.1 ID=NO17G02920.1|Name=NO17G02920.1|organism=Nannochloropsis oceanica|type=mRNA|length=4113bp|location=Sequence derived from alignment at chr17:852484..856596+ (Nannochloropsis oceanica)
ACCACAGGCCGGATCACCACCATGCCGCCCGGGTGACGTCCAACCTCCCC
CCACTCTGCTGCCCCGCTTAAAGGGCATGATAAACCGCAAGAAAGTCAAG
GGCAGTCCAGCCTTGTCCTGTCCGTCCGCGTCCTTTCCGTCATCTTTTCC
TCTGGATGCAGCCTTCTCCCTGTCCCTTCTCCAGTCGTCCCGGTGCCTCA
CCCTTGCCCTCCCCTTCCCTCCCTCCCTCAGCCTGTCCCACCTTGCTTCG
TCTTCCTCGTCGTTTTATTCTTCCTGGGTGACGGGAGAGAGGGTAGAGGG
GGCGTTAGGTCTGCCTCCTTCCTCCTCGGCCTTGGCATCCTTCGTTGCTG
TCCCAATGGAGAGGAAGGAGGGAGTGAAAGAGGGAGGGGTATGTGCGTTG
TGGAACCCAGCATTGGACGTATGCCTTGCCCCAAAAGCGGCGGTAACAAA
GGACGGAGGAGCTGCTGGGTGGGAGATGGGGCTGAGAGATCGGGAGGACA
GGAGGCAGACGGAGGAAGGAGGAGGTGGAGGGAGGAGAGGGTGCGGGGGA
TGGACATGGCGGGAGGGAGGGCGGGTGGTGTGGGTTGAGGAAGGAGAGGA
GGAACGGGTGCTGGGTTGGAAGGAGAGGGAAGGAGGAAGGGAAGGGGAGT
GGAGGTTGCTGACGCCGGCTGAGGAGGAAAAGGAGGAGAAGAAGAAGGGC
TGTGGTGACAGCTGTCGTCTCGAGGTAGTGCGACACGAATGGATGGGTAA
GAAGCAACGGGAGGGAATAGGGGGGAAAGTGACGACGACCTGGACCAGCT
CAGCATCAACAGCAGCAGCGCCTACGGACTATTTCAACTTAGAGAAGATT
GCATCTCCCAATGTTGATGCCTACCCTCCCTTTCTCCCTCCCTCCCTCCT
CAGGCCACGACGACGGCGGTCCCTTCCGCCTCGTGTGCGCCTCGTCCCTG
CGCTGCCTTTGCGACTGCACAGACGGCAACGCCAAGGCACGTGCCCTCCC
TCCCTCCCTTCCTTCCTCCCTCAGATCGTCCTTGCCGCCCCATCGGTGCT
ACTGAGATGAAGGAGAGAACGTTTTTCCCACGTACACCACCCACATCCCA
CAATACCTCCCTCCATACCCCTTCCCTCCTTCCTCTCCTCCCTCCCTCCC
TCCTCCCTCAGGTCCTCTGTCTGTGCCGTCGCCACCTCTCCGACGGCGGC
AAGTGGGAGTACAGGCCTTGGGTTCAAGCGCTCGTGGAAAGGCGGAGTGG
GAGGGCCGTGGGTGTGAGGAACGAGGAAGGGCTGCAGGTAGGTAGGTAGG
GAGGGAGGGAGGGAGGGAGGACGACGGAAAACAAATAAAGAGAGAGCTGT
CTGGCTCACTTGCTTCTCCCCCCCTCACTCTCCAACCTGCCCAGCTTGAC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCGTCCGCCCGCCTCGTTTTCTGTCCAGCCTCCTCCCTCCTCACC
CACCCTTCCTCCTTCTCCGTCATTTCCTGTGCCCAAGGCAGCGATCGATG
GGCTGAGCCTCTCCGTCTCTCCCCTCCCTCTTTAGGGGAAGAGAGGCTGC
GGCAGGTAGGGAGGGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGGGTAAGTGAGTGAGTGAGGGAGGGAGGGGGGAA
GGGAGGGAGGGGGGAAGGGAGGGAGGGGGGAAGGGAGGTCCACGTGTTAA
TGTTGCTCTTTAACGACAGGTTTGGGTGCCGGAACGCCATATCTTTCCTC
CCTCCCTCCCTCCCTCCCTCTCTCTGTGCTCTGCTCGTCCTTGTCTTGAT
GGAAGCAGCGAGAGGAAGACGGTCCTCACCCGCGCCTCCCTTGCCGCCCG
CGGTCTGCTCGTCACCCTCCCTCTCGACAGCCCTTCCAGGCCCGAGGAGA
GAGGGAGGGAGGAAGGGAAGGAGGGGGGGGGGGCGAGAGAGCACCTCTCG
CCTCTTGTCAAGACGGGGGAGGGTCATCTTTACACCTTCTCGCTTCCCTC
GTCTTCCTCCCCCTTTGTCCTCAAGCGCTACCACAAGCACGCTGCAGGTA
GGTAGATGGCCTTCTTCGCTCCCTCCCTCCCTCCCTACCTTTCCCCCTCC
TTCCCTCCCACCTTCTTTCTAGTTCTCTGTATGTCCATTATCTTGCTCCC
ATCGATCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCAGGCA
AGGCCCTCAAAGAACTCCACGCGCTGCTCCTGCTCTCTGCCCCCTCCTCC
CTCCCTCCCTCCCTCCCGCCCTTCCTAGTTGCCTTGCGAGGGGTGGTGTG
GGAGGAGGGGAAGGGCGGGAAGGAGGGGGGGGGGGTTTCGAAGCCTTCTG
CCCTGGTATTGGAGCAAGTGCTGCTGAATGTACGAGAGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTAGACTCGAAGG
AGATTGATCTGTCATCCACTTTCCACTCGTCCCTTACTCCCTCCCTCCTC
CCCTCCCCTCCCTCCTCTTTCCCTCCCTCCCTCCAGGGTATAGAGGCCCC
GCACCGCGTGGATCTGCACTCCTTCCTTGCATATCGTCGCTCACAAATAC
AGCAGCAGCAGCAGTCCCTTGCCCTCCCTCCCGCCCTCCCTCTCTCCCTC
CCTCACCTCCTCGCGCTGGCCGAGGCCCTTGGGGACGCCCTCGGGTTTCT
CCACGAAAGAGGATTGTGCCACAAGGACCTGCACAGGTGGGGGGGGGAGG
GAGGGAGGGAGGGAGGGATTTAGGAGGGGGGGATGATGTACCGGGAGGGA
GGGAGGGAGGGACGGACGGACGGAGAGGGGGAGGATAAGGAAACGTCATC
GATGCATTGGCTGCCTATTTCAATTGTGTATGCTCGTCTGCTTCCTAAAT
CTTTTCCTCCCTCCTTAAATCCCTTCCTCCTTCCCTCCCTCCCTCCTTCC
CTTCCTCCCTCGGTGCAGCGGGAATATCCTCCTCACTCACTTGGAGGAGC
TCGACGTCCCACCCTCAGCAGCATCAGCAGCAGCAACAACATTAACACCC
CTCCCTGCCTCCCTCCCTCGCCCCCTCCTTGGCATCAAGGTGGCGGATTT
TGGTCTCTCCTGCCCTTTCAATCCCCTGAGGGCCCAGCTGGACATGCGGG
CGCTGGGTAGGGAGGGAGGGAGGGAGGGAGGGAGGAAGTAAAGGAAGAAG
CGAGGGGAGGAGGACCACAAACGTTTTTTTCAACACAATGTGAGGCGGTC
TCTAATCGTGTCTACCTTCCTCTTCCACTCTTTCCCTTCCTTTCCGACAG
CCTACGTGCTGATGGAGGCGGCGCACGATGGGGTGGATCGCTCCTCAATG
GAGAAGAAAGACGAAGGACCTGAGGAAGGGAGGGAGGAAGGGAGGGAGGA
GCTGAACAAGGAGAAGGAGTGGCCACTGCCAGCCCGTCTGACGGCCAAGT
ACGGAGGGAGGGGGGAAGGGAAGGAAGGGGGGGCGGGGGCTATGCGGCTG
CATTTACTGAATTTCCACACCCCCACTTTATTCGCATGCTTCTTCCCATC
CCTTCCTTTCCTCCCTCTTTCCCCCCCCCCTCCCTCCTCCTCTTTTTCCT
TTTACAGATGGTCTCTCTCCTTCCCTCCCCCGCCCGAGCAAGGTCCTTTC
TTCTCCATGCACGACCTCCCTCCCTCCCTCCTTTCCGCCCTCGATCCCGT
CTTTCACGGGGCGTTTGGGGAGGGGGGGAAGGAAGGAAAGAGGGAGGGAG
GAAGTGGGGAAGGGCAGCAATGGACACCGTTAGGGGTGGCGATGTGGGCG
CGGAGGGCGGGAGGGAGGAAGGGAGGAAAGGAGAGAGGGGCAGGCGTGGA
AATGACAGGCTAA

Coding sequence (CDS) from alignment at chr17:852484..856596+

>NO17G02920.1 ID=NO17G02920.1|Name=NO17G02920.1|organism=Nannochloropsis oceanica|type=CDS|length=1944bp|location=Sequence derived from alignment at chr17:852484..856596+ (Nannochloropsis oceanica)
ATGAAGGAGAGAACGTTTTTCCCACGTACACCACCCACATCCCACAATAC
CTCCCTCCATACCCCTTCCCTCCTTCCTCTCCTCCCTCCCTCCCTCCTCC
CTCAGGTCCTCTGTCTGTGCCGTCGCCACCTCTCCGACGGCGGCAAGTGG
GAGTACAGGCCTTGGGTTCAAGCGCTCGTGGAAAGGCGGAGTGGGAGGGC
CGTGGGTGTGAGGAACGAGGAAGGGCTGCAGCTTGACTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTCCGC
CCGCCTCGTTTTCTGTCCAGCCTCCTCCCTCCTCACCCACCCTTCCTCCT
TCTCCGTCATTTCCTGTGCCCAAGGCAGCGATCGATGGGCTGAGCCTCTC
CGTCTCTCCCCTCCCTCTTTAGGGGAAGAGAGGCTGCGGCAGGTTTGGGT
GCCGGAACGCCATATCTTTCCTCCCTCCCTCCCTCCCTCCCTCTCTCTGT
GCTCTGCTCGTCCTTGTCTTGATGGAAGCAGCGAGAGGAAGACGGTCCTC
ACCCGCGCCTCCCTTGCCGCCCGCGGTCTGCTCGTCACCCTCCCTCTCGA
CAGCCCTTCCAGGCCCGAGGAGAGAGGGAGGGAGGAAGGGAAGGAGGGGG
GGGGGGCGAGAGAGCACCTCTCGCCTCTTGTCAAGACGGGGGAGGGTCAT
CTTTACACCTTCTCGCTTCCCTCGTCTTCCTCCCCCTTTGTCCTCAAGCG
CTACCACAAGCACGCTGCAGGCAAGGCCCTCAAAGAACTCCACGCGCTGC
TCCTGCTCTCTGCCCCCTCCTCCCTCCCTCCCTCCCTCCCGCCCTTCCTA
GTTGCCTTGCGAGGGGTGGTGTGGGAGGAGGGGAAGGGCGGGAAGGAGGG
GGGGGGGGTTTCGAAGCCTTCTGCCCTGGTATTGGAGCAAGTGCTGCTGA
ATGGTATAGAGGCCCCGCACCGCGTGGATCTGCACTCCTTCCTTGCATAT
CGTCGCTCACAAATACAGCAGCAGCAGCAGTCCCTTGCCCTCCCTCCCGC
CCTCCCTCTCTCCCTCCCTCACCTCCTCGCGCTGGCCGAGGCCCTTGGGG
ACGCCCTCGGGTTTCTCCACGAAAGAGGATTGTGCCACAAGGACCTGCAC
AGCGGGAATATCCTCCTCACTCACTTGGAGGAGCTCGACGTCCCACCCTC
AGCAGCATCAGCAGCAGCAACAACATTAACACCCCTCCCTGCCTCCCTCC
CTCGCCCCCTCCTTGGCATCAAGGTGGCGGATTTTGGTCTCTCCTGCCCT
TTCAATCCCCTGAGGGCCCAGCTGGACATGCGGGCGCTGGCCTACGTGCT
GATGGAGGCGGCGCACGATGGGGTGGATCGCTCCTCAATGGAGAAGAAAG
ACGAAGGACCTGAGGAAGGGAGGGAGGAAGGGAGGGAGGAGCTGAACAAG
GAGAAGGAGTGGCCACTGCCAGCCCGTCTGACGGCCAAATGGTCTCTCTC
CTTCCCTCCCCCGCCCGAGCAAGGTCCTTTCTTCTCCATGCACGACCTCC
CTCCCTCCCTCCTTTCCGCCCTCGATCCCGTCTTTCACGGGGCGTTTGGG
GAGGGGGGGAAGGAAGGAAAGAGGGAGGGAGGAAGTGGGGAAGGGCAGCA
ATGGACACCGTTAGGGGTGGCGATGTGGGCGCGGAGGGCGGGAGGGAGGA
AGGGAGGAAAGGAGAGAGGGGCAGGCGTGGAAATGACAGGCTAA

Synonyms

Publications