NO17G01730.1, NO17G01730.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01730.1
Unique Name	NO17G01730.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3260
Alignment location	chr17:501307..505512 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:501307..505512 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G01730.1 vs.
Match: EWM24285.1 (hypothetical protein Naga_100020g29 [Nannochloropsis gaditana])

HSP 1 Score: 388.7 bits (997), Expect = 5.600e-104
Identity = 223/409 (54.52%), Postives = 284/409 (69.44%), Query Frame = 0

Query:  572 EKLESKTAALQHELRDQHMHLSQRLSVAVQRLALCEVKSGERYDFLKNALTEMALKLVKEDDVVALGPNPSIPDLLAELGIQRAETAHILERLEEETVALLSSCTQLQGSVQALATRDNQWAVLDARLHEHYQNLVNHCVVVMVRPFSLSSSQPSSGPEQLLKLEGRALLLKNETQDVIATHSYRIAKTIALKADYDVIRNSMERKDSLTDEECDASISQSRETYLTRFLDAVRTGVDKAI-VKDTGIGMRESLAQFYLKLEQAIRLALSKFSRIHVGRSLFGKIISPTQVTCLSCDRSLVEEKGLMLRRISLKKAATTSTVTTNATPAGTTTGPRRASLYRANASGFKTFSFVRETNFLENVLKDQRVRQPVSRGILIPSKNTPISGTTPPTTRLGRRAPSYAWGSSS 980
            + LESKTAA Q E RDQHM LSQRLSVA+QRLAL EVKSGERYD LKN L E+ALKLV++  V  LGP+PSIPDLL +L +QR E+   L RLE++   L  S  QL GSVQAL TR N WA LD RL E++++LV HC  +  R     SS  S GP+Q+L+L+GR LLLK ET D+IA+HSYRIAKTIALKADYD+IR+++E KD+LTD +CDA I QSRETYL RFL  V+  V+  +  +    G+ E + QF+ KLEQAIRLALSKFSRIH GRSLFGKI    +  CL+C+R   EE G   RR S +K+ T S  + NA  +G+    +R S+YR N + FKTFS  +E +FLEN +K+QR R+  +R  ++ +     +  + P  R GRRA SY+ G+++
Sbjct:    3 DDLESKTAATQREFRDQHMQLSQRLSVAIQRLALYEVKSGERYDLLKNTLLELALKLVRKKVVAGLGPDPSIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFAR-----SSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTLTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQFPEEPGQGDRRASFRKSVTGSN-SINAI-SGSNGISQRGSIYRQNRNSFKTFSSSKEASFLENAIKEQRGRRSDARENVVST-----ARASTPANRQGRRATSYSLGTAT 399

The following BLAST results are available for this feature:

BLAST of NO17G01730.1 vs.

BLAST of NO17G01730.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24285.1	5.600e-104	54.52	hypothetical protein Naga_100020g29 [Nannochlorops...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G01730	NO17G01730	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01730.1	NO17G01730.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01730.1.cds1	NO17G01730.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01730.1.cds2	NO17G01730.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01730.1.cds3	NO17G01730.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01730.1.cds4	NO17G01730.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO17G01730.1.cds5	NO17G01730.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:501307..505512+
coding sequence from alignment at chr17:501307..505512+

mRNA sequence

>NO17G01730.1 ID=NO17G01730.1|Name=NO17G01730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3260bp
CACACAGATCGACACATCTCTGGCTTTCGGCGTGCAAGGAAGCAAAACCC
ACCAAAAAGAGTGTGTGCTGCGGAGCCTCCGTTCTGCTCTTTAAATATGG
CCTTGTCGTCATCGTCGCTGACTGATCCGGGCACTGCAACCAACGTGAAC
GTTATCGGAGACTCCATGACCACTCCCGACAAAAGCAAACTCGCCGATTA
CCTCAATAAGTTAGAGCACCGTAATTTGGTGACTGATGCAGGGTTTACCC
GCATATCCCGTGAGGGGACGGCCACAAGCAAAGGCACGACACGTTCCTCA
TTTCGGAATCCCAAAAGTGTGACGGCAGTCCCAGGCGCCGGTGAAGAGAA
CGAGGACCTGCTGTACCATCATTTTGTCGCGAGTCCTCGAACTGAATATG
AATGTTTGGAGAAGGAGGAGAGGGCTCTGCGGGTCAATAATATTTATGAA
ACTCGAAGCACCTCTGTGGAGAAGAATGATGCTGGCTCTGGGCTAATTAC
CCCGCCCTTGTCTTCCGACGAGCAATCAGAACGAGCTCTTGTACACGAGC
GGGTAGCTTCACGCAAGACATTTTCCTCGTCGGCCTCCTCTCTCTCCCTG
TCGTCTTCCTCGTCCTCTTCGGCAGACGAACGTCTTGGCCCTCCTCCACA
TTCTCGGATTGAACACTTGGCACCTTCTCCGCCAATTTCTCAGAACCGCC
AGTCCGCTGAGACCGCATCCCATAGTCGTCGTCCGCATAAACGCTCGGCA
TCCTGCAACAGTGATATCAGTGGTCACATTTGTAATGTCAACTTCGCCAA
TGGACGAGCAGCCACCATCACCTGGGAGGGGCTCAACTTCACACAGGACG
CACTGCGGGAAACCATGGACGAACTTCGCGAAGTAGTGGCAAACTTAAAT
ATAAAGGTGAAGGAGGTGGAGATGGAATCAAAACAGCGTGCCAAGATGCA
GGTGGCGAAGGACACGGCGCAATATGAGTTTTTAGAAATGGAGCTGAAGA
AACTGAGCCGTCAGGTAGCGGTAAGACTCAGTCACACTGAGCTTCTGGAT
ATGGCAGCTATGCAGAACCAAAAGCTCAAGAGCCTTGAGACAGCTATTTT
GGGAGTGATTGACGAGAGGGCTGAATCCCTCCACCATAAGTTGTATGGCG
AGTTGGAAATAGTGGTCAAGCAGCTCTACGCCATCCAGCAAACCGGAGAA
AAATGTCGCAAATTTGTTGAAGACCGGGTCAAGCAGTTCGTGATGGATCA
CACGGGACTGGAAAACGAGCTGCAAAAGGAGCGAAGGGAGAAGGAAGAAC
TGAAGTGCCAATACAAGCGCTTGGCTGAACGGCTACTGCAAGTGGAGTCG
AGGCAGGTGGAGACCGCAATGCGGCAGGATGCAGGCCTCAAAGACTTCGA
AAAGCAGTGCAATCAGTGCTTGATCGCGGAGTCCAGTAACCGGCAACAAG
ACTTAATGGGCATGGCCACTGCTCTGCGCGATGATCTTGCCGAAAACATG
GAGGCAGTCCGTCAGGAAAGGGCGGCGCTAAGGATGGAACTTGTGGCGCA
CTGTGAAACTGCGGTGACAAGCTGCACCGCATTGCATTCGCAGAGCCTGG
TCAAGATAGAATCCAACCTCCGACACGACGTCACCAACCAGCTTGACAGC
ACCCACAAAGACCTCTCGGCACGATTCCAAGCATTGACGGACGCCCAGCA
GGCCGCTGAAGCGCATGCGCTGGCTCTGTTCACGCGCCAAGTGGCGCGTA
CCGACGAGATCCAGGCTGAGCTAGCAGCGAACTTGAACCATAACATGGAG
GCACTAGTGGAGAAGTTAGAATCCAAGACGGCGGCACTCCAACACGAGCT
ACGGGATCAACACATGCACCTGTCACAGCGCCTCAGCGTCGCCGTGCAGC
GCCTCGCGTTGTGTGAAGTCAAGTCTGGGGAAAGGTATGACTTTCTCAAA
AACGCCCTGACGGAGATGGCATTAAAGCTTGTTAAGGAGGATGATGTGGT
GGCGCTTGGTCCGAATCCGTCGATTCCAGACTTGCTGGCCGAGCTTGGTA
TCCAACGGGCAGAGACCGCCCATATTCTGGAGCGACTCGAAGAGGAGACA
GTCGCCTTGCTATCATCATGCACGCAGCTGCAAGGTAGTGTTCAAGCCCT
TGCCACCCGCGACAACCAGTGGGCAGTCCTGGATGCGCGCCTCCACGAGC
ACTATCAGAATTTGGTGAATCATTGTGTCGTCGTTATGGTCCGTCCTTTT
TCACTGTCATCCTCGCAGCCATCCTCCGGGCCAGAGCAGCTCCTAAAGTT
GGAAGGGCGAGCCTTGCTCTTAAAGAACGAGACGCAGGACGTCATTGCCA
CTCACAGCTACCGTATAGCCAAGACCATTGCCCTGAAGGCTGACTATGAC
GTGATTCGTAATAGTATGGAGCGCAAGGACTCCTTGACTGACGAGGAATG
CGATGCCAGCATTTCGCAATCGCGCGAGACGTACCTCACGCGGTTCTTGG
ACGCCGTCAGGACAGGCGTGGACAAAGCTATTGTCAAAGACACGGGAATC
GGCATGAGGGAAAGTCTAGCGCAGTTTTACCTGAAGCTGGAACAAGCAAT
TCGCTTGGCATTGAGTAAATTTTCTCGTATCCACGTAGGTCGCTCGTTGT
TTGGTAAGATCATTTCGCCTACTCAAGTAACGTGCTTGTCTTGCGACCGC
TCACTTGTCGAAGAAAAAGGGCTAATGCTTCGCCGGATATCGCTGAAAAA
GGCCGCCACAACAAGTACAGTGACCACGAATGCTACCCCCGCCGGCACCA
CCACAGGCCCGCGGCGCGCCTCCCTTTACCGCGCCAACGCCAGTGGCTTC
AAAACCTTTTCTTTTGTCAGAGAGACTAATTTCCTGGAAAATGTGCTCAA
GGACCAACGTGTTCGACAACCAGTTTCTCGAGGAATCCTCATCCCAAGCA
AGAATACCCCCATCTCAGGCACCACTCCCCCCACTACCCGCCTCGGGCGA
CGTGCACCAAGCTACGCCTGGGGATCCTCCAGCGGACATGATGGCCGAAA
TCAGAAACTTCCGAGTATTGTCTAGCCACTCACACAGTATGCACAAAACA
AAACAACACACCAACAACTGAAACATACAAAAACCATCTGACTCATATGC
TTTATATGTTGGATCGGACCCACAATTTTCATAATAGAAACACAATCAAA
TTAAGCCACGTGGCGGAAGTCCAGATATTAAGGCAAAAACACTCAACAAA
TAGACGAGCG

protein sequence of NO17G01730.1

>NO17G01730.1-protein ID=NO17G01730.1-protein|Name=NO17G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=993bp
MALSSSSLTDPGTATNVNVIGDSMTTPDKSKLADYLNKLEHRNLVTDAGF
TRISREGTATSKGTTRSSFRNPKSVTAVPGAGEENEDLLYHHFVASPRTE
YECLEKEERALRVNNIYETRSTSVEKNDAGSGLITPPLSSDEQSERALVH
ERVASRKTFSSSASSLSLSSSSSSSADERLGPPPHSRIEHLAPSPPISQN
RQSAETASHSRRPHKRSASCNSDISGHICNVNFANGRAATITWEGLNFTQ
DALRETMDELREVVANLNIKVKEVEMESKQRAKMQVAKDTAQYEFLEMEL
KKLSRQVAVRLSHTELLDMAAMQNQKLKSLETAILGVIDERAESLHHKLY
GELEIVVKQLYAIQQTGEKCRKFVEDRVKQFVMDHTGLENELQKERREKE
ELKCQYKRLAERLLQVESRQVETAMRQDAGLKDFEKQCNQCLIAESSNRQ
QDLMGMATALRDDLAENMEAVRQERAALRMELVAHCETAVTSCTALHSQS
LVKIESNLRHDVTNQLDSTHKDLSARFQALTDAQQAAEAHALALFTRQVA
RTDEIQAELAANLNHNMEALVEKLESKTAALQHELRDQHMHLSQRLSVAV
QRLALCEVKSGERYDFLKNALTEMALKLVKEDDVVALGPNPSIPDLLAEL
GIQRAETAHILERLEEETVALLSSCTQLQGSVQALATRDNQWAVLDARLH
EHYQNLVNHCVVVMVRPFSLSSSQPSSGPEQLLKLEGRALLLKNETQDVI
ATHSYRIAKTIALKADYDVIRNSMERKDSLTDEECDASISQSRETYLTRF
LDAVRTGVDKAIVKDTGIGMRESLAQFYLKLEQAIRLALSKFSRIHVGRS
LFGKIISPTQVTCLSCDRSLVEEKGLMLRRISLKKAATTSTVTTNATPAG
TTTGPRRASLYRANASGFKTFSFVRETNFLENVLKDQRVRQPVSRGILIP
SKNTPISGTTPPTTRLGRRAPSYAWGSSSGHDGRNQKLPSIV*

mRNA from alignment at chr17:501307..505512+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G01730.1 ID=NO17G01730.1|Name=NO17G01730.1|organism=Nannochloropsis oceanica|type=mRNA|length=4206bp|location=Sequence derived from alignment at chr17:501307..505512+ (Nannochloropsis oceanica)
CACACAGATCGACACATCTCTGGCTTTCGGCGTGCAAGGAAGCAAAACCC
ACCAAAAAGAGTGTGTGCTGCGGAGCCTCCGTTCTGCTCTTTAAATATGG
CCTTGTCGTCATCGTCGCTGACTGATCCGGGCACTGCAACCAACGTGAAC
GTTATCGGAGACTCCATGACCACTCCCGACAAAAGCAAACTCGCCGATTA
CCTCAATAAGGTGAGTATGAATGTCCTACTTCATGTGAATCTTTGCTTCT
GGCCTCACAACAATGTCTATATCTCTCAAGGATTCGAGGGGCTGCAATGG
TTTTGAGTACTCAGTCGCTCTCACTTCTGCATGCACCAACACGATGAAGT
CCCAAAAGAATGTTGAAGAGCCATGCCTGCGCGCGAAACCTAATCATTTT
TTTATGTCAACAAGTTAATCTGTGCGCTTTTTTTCTACATCCTTATAGTT
AGAGCACCGTAATTTGGTGACTGATGCAGGGTTTACCCGCATATCCCGTG
AGGGGACGGCCACAAGCAAAGGCACGACACGTTCCTCATTTCGGAATCCC
AAAAGTGTGACGGCAGTCCCAGGCGCCGGTGAAGAGAACGAGGACCTGCT
GTACCATCATTTTGTCGCGAGTCCTCGAACTGAATATGAATGTTTGGAGA
AGGAGGAGAGGGCTCTGCGGGTCAATAATATTTATGAAACTCGAAGCACC
TCTGTGGAGAAGAATGATGCTGGCTCTGGGCTAATTACCCCGCCCTTGTC
TTCCGACGAGCAATCAGAACGAGCTCTTGTACACGAGCGGGTAGCTTCAC
GCAAGACATTTTCCTCGTCGGCCTCCTCTCTCTCCCTGTCGTCTTCCTCG
TCCTCTTCGGCAGACGAACGTCTTGGCCCTCCTCCACATTCTCGGATTGA
ACACTTGGCACCTTCTCCGCCAATTTCTCAGAACCGCCAGTCCGCTGAGA
CCGCATCCCATAGTCGTCGTCCGCATAAACGCTCGGCATCCTGCAACAGT
GATATCAGTGGTCACATTTGTAATGTCAACTTCGCCAATGGACGAGCAGC
CACCATCACCTGGGAGGGGCTCAACTTCACACAGGACGCACTGCGGGAAA
CCATGGACGAACTTCGCGAAGTAGTAAGTAGGAGTGACCCCTGCTTTTTC
TAACACGTTGTGGGTGCTCCACATAATATCCTCCATTTACCTTTCTAATG
CCTGTACTTTAATGCAGCAGGCTTTAATGCGTCTGTCCGCTTGGTAAACC
TCACAAACTAAATTTATGATGCTCTTTCGTTTTAACGTCTAGAAACACTT
CAACGCAATATAAATGGGCGGCATTTATTCCCGTATTCCCGCTTTCCCCC
CCTCCCCGCCCGATTCTCCAGGTGGCAAACTTAAATATAAAGGTGAAGGA
GGTGGAGATGGAATCAAAACAGCGTGCCAAGATGCAGGTGGCGAAGGACA
CGGCGCAATATGAGTTTTTAGAAATGGAGCTGAAGAAACTGAGCCGTCAG
GTAGCGGTAAGACTCAGTCACACTGAGCTTCTGGATATGGCAGCTATGCA
GAACCAAAAGCTCAAGAGCCTTGAGACAGCTATTTTGGGAGTGATTGACG
AGAGGGCTGAATCCCTCCACCATAAGTTGTATGGCGAGTTGGAAATAGTG
GTCAAGCAGCTCTACGCCATCCAGCAAACCGGAGAAAAATGTCGCAAATT
TGTTGAAGACCGGGTCAAGCAGTTCGTGATGGATCACACGGGACTGGAAA
ACGAGCTGCAAAAGGAGCGAAGGGAGAAGGAAGAACTGAAGTGCCAATAC
AAGCGCTTGGCTGAACGGCTACTGCAAGTGGAGTCGAGGCAGGTGGAGAC
CGCAATGCGGCAGGATGCAGGCCTCAAAGACTTCGAAAAGCAGTGCAATC
AGTGCTTGATCGCGGAGTCCAGTAACCGGCAACAAGACTTAATGGGCATG
GCCACTGCTCTGCGCGATGATCTTGCCGAAAACATGGAGGCAGTCCGTCA
GGAAAGGGCGGCGCTAAGGATGGAACTTGTGGCGCACTGTGAAACTGCGG
TGACAAGCTGCACCGCATTGCATTCGCAGAGCCTGGTCAAGATAGAATCC
AACCTCCGACACGACGTCACCAACCAGCTTGACAGCACCCACAAAGACCT
CTCGGCACGATTCCAAGCATTGACGGACGCCCAGCAGGCCGCTGAAGCGC
ATGCGCTGGCTCTGTTCACGCGCCAAGTGGCGCGTACCGACGAGATCCAG
GCTGAGCTAGCAGCGAACTTGAACCATAACATGGAGGCACTAGTGGAGAA
GTTAGAATCCAAGACGGCGGCACTCCAACACGAGCTACGGGATCAACACA
TGCACCTGTCACAGCGCCTCAGCGTCGCCGTGCAGCGCCTCGCGTTGTGT
GAAGTCAAGTCTGGGGAAAGGTATGACTTTCTCAAAAACGCCCTGACGGA
GATGGCATTAAAGCTTGTTAAGGAGGATGATGTGGTGGCGCTTGGTCCGA
ATCCGTCGATTCCAGACTTGCTGGCCGAGCTTGGTATCCAACGGGCAGAG
ACCGCCCATATTCTGGAGCGACTCGAAGAGGAGACAGTCGCCTTGCTATC
ATCATGCACGCAGCTGCAAGGTAGTGTTCAAGCCCTTGCCACCCGCGACA
ACCAGTGGGCAGTCCTGGATGCGCGCCTCCACGAGCACTATCAGAATTTG
GTGAATCATTGTGTCGTCGTTATGGTCCGTCCTTTTTCACTGTCATCCTC
GCAGCCATCCTCCGGGCCAGAGCAGCTCCTAAAGTTGGAAGGGCGAGCCT
TGCTCTTAAAGAACGAGACGCAGGACGTCATTGCCACTCACAGCTACCGT
ATAGCCAAGACCATTGCCCTGAAGGCTGACTATGACGTGATTCGTAATAG
TATGGAGCGCAAGGACTCCTTGACTGACGAGGAATGCGATGCCAGCATTT
CGCAATCGCGCGAGACGTACCTCACGCGGTTCTTGGACGCCGTCAGGACA
GGCGTGGACAAAGCTATTGTCAAAGACACGGGAATCGGCATGAGGGAAAG
TCTAGCGCAGTTTTACCTGAAGCTGGAACAAGCAATTCGCTTGGCATTGA
GTAAATTTTCTCGTATCCACGTAGGTCGCTCGTTGTTTGGTAAGATCATT
TCGCCTACTCAAGTAACGTGCTTGTCTTGCGACCGCTCACTTGTCGAAGA
AAAAGGTACGCATCTGTATACTTTGTAACATTTGATAAGGAGCGTGAACG
ACCTTTATGGTGAGGCTGAGAGTTAGTGTTTAAGAAGAGGTTTTCGTGTC
CAATTATAAGGGCATGCCGCTGGTCCCTGCTTTGATTGGTATTTGATGTG
ACCTATTCGCCTTCATTTACGTTCTCTTTGATTATCTGCCAAAAATACCA
TTAAAACGTTATACAGGGCTAATGCTTCGCCGGATATCGCTGAAAAAGGC
CGCCACAACAAGTACAGTGACCACGAATGCTACCCCCGCCGGCACCACCA
CAGGCCCGCGGCGCGCCTCCCTTTACCGCGCCAACGCCAGTGGCTTCAAA
ACCTTTTCTTTTGTCAGAGAGACTAATTTCCTGGAAAATGTAAGGTTCAC
GTACTGTATCATCATAATAGTGGGGTGAATGTTAAAGGAAGTAGAAAGTG
CGAGCCTATTTGTGTTGAAGGACGTTTATTTCATGCGCGCATGTGCATAT
TTGTGCGGATTTGCGTGTCACTTCTTCTATGTACTTCCGAGTCGTGAAGA
ATAAACGGTGCATTGTACTCCATGCCTGTGCCATAGTTATTGCCTCCTCC
ACAAATGTTCTGATTCTTTTTCACGTAAACATACACAGGTGCTCAAGGAC
CAACGTGTTCGACAACCAGTTTCTCGAGGAATCCTCATCCCAAGCAAGAA
TACCCCCATCTCAGGCACCACTCCCCCCACTACCCGCCTCGGGCGACGTG
CACCAAGCTACGCCTGGGGATCCTCCAGCGGACATGATGGCCGAAATCAG
AAACTTCCGAGTATTGTCTAGCCACTCACACAGTATGCACAAAACAAAAC
AACACACCAACAACTGAAACATACAAAAACCATCTGACTCATATGCTTTA
TATGTTGGATCGGACCCACAATTTTCATAATAGAAACACAATCAAATTAA
GCCACGTGGCGGAAGTCCAGATATTAAGGCAAAAACACTCAACAAATAGA
CGAGCG

Coding sequence (CDS) from alignment at chr17:501307..505512+

>NO17G01730.1 ID=NO17G01730.1|Name=NO17G01730.1|organism=Nannochloropsis oceanica|type=CDS|length=2979bp|location=Sequence derived from alignment at chr17:501307..505512+ (Nannochloropsis oceanica)
ATGGCCTTGTCGTCATCGTCGCTGACTGATCCGGGCACTGCAACCAACGT
GAACGTTATCGGAGACTCCATGACCACTCCCGACAAAAGCAAACTCGCCG
ATTACCTCAATAAGTTAGAGCACCGTAATTTGGTGACTGATGCAGGGTTT
ACCCGCATATCCCGTGAGGGGACGGCCACAAGCAAAGGCACGACACGTTC
CTCATTTCGGAATCCCAAAAGTGTGACGGCAGTCCCAGGCGCCGGTGAAG
AGAACGAGGACCTGCTGTACCATCATTTTGTCGCGAGTCCTCGAACTGAA
TATGAATGTTTGGAGAAGGAGGAGAGGGCTCTGCGGGTCAATAATATTTA
TGAAACTCGAAGCACCTCTGTGGAGAAGAATGATGCTGGCTCTGGGCTAA
TTACCCCGCCCTTGTCTTCCGACGAGCAATCAGAACGAGCTCTTGTACAC
GAGCGGGTAGCTTCACGCAAGACATTTTCCTCGTCGGCCTCCTCTCTCTC
CCTGTCGTCTTCCTCGTCCTCTTCGGCAGACGAACGTCTTGGCCCTCCTC
CACATTCTCGGATTGAACACTTGGCACCTTCTCCGCCAATTTCTCAGAAC
CGCCAGTCCGCTGAGACCGCATCCCATAGTCGTCGTCCGCATAAACGCTC
GGCATCCTGCAACAGTGATATCAGTGGTCACATTTGTAATGTCAACTTCG
CCAATGGACGAGCAGCCACCATCACCTGGGAGGGGCTCAACTTCACACAG
GACGCACTGCGGGAAACCATGGACGAACTTCGCGAAGTAGTGGCAAACTT
AAATATAAAGGTGAAGGAGGTGGAGATGGAATCAAAACAGCGTGCCAAGA
TGCAGGTGGCGAAGGACACGGCGCAATATGAGTTTTTAGAAATGGAGCTG
AAGAAACTGAGCCGTCAGGTAGCGGTAAGACTCAGTCACACTGAGCTTCT
GGATATGGCAGCTATGCAGAACCAAAAGCTCAAGAGCCTTGAGACAGCTA
TTTTGGGAGTGATTGACGAGAGGGCTGAATCCCTCCACCATAAGTTGTAT
GGCGAGTTGGAAATAGTGGTCAAGCAGCTCTACGCCATCCAGCAAACCGG
AGAAAAATGTCGCAAATTTGTTGAAGACCGGGTCAAGCAGTTCGTGATGG
ATCACACGGGACTGGAAAACGAGCTGCAAAAGGAGCGAAGGGAGAAGGAA
GAACTGAAGTGCCAATACAAGCGCTTGGCTGAACGGCTACTGCAAGTGGA
GTCGAGGCAGGTGGAGACCGCAATGCGGCAGGATGCAGGCCTCAAAGACT
TCGAAAAGCAGTGCAATCAGTGCTTGATCGCGGAGTCCAGTAACCGGCAA
CAAGACTTAATGGGCATGGCCACTGCTCTGCGCGATGATCTTGCCGAAAA
CATGGAGGCAGTCCGTCAGGAAAGGGCGGCGCTAAGGATGGAACTTGTGG
CGCACTGTGAAACTGCGGTGACAAGCTGCACCGCATTGCATTCGCAGAGC
CTGGTCAAGATAGAATCCAACCTCCGACACGACGTCACCAACCAGCTTGA
CAGCACCCACAAAGACCTCTCGGCACGATTCCAAGCATTGACGGACGCCC
AGCAGGCCGCTGAAGCGCATGCGCTGGCTCTGTTCACGCGCCAAGTGGCG
CGTACCGACGAGATCCAGGCTGAGCTAGCAGCGAACTTGAACCATAACAT
GGAGGCACTAGTGGAGAAGTTAGAATCCAAGACGGCGGCACTCCAACACG
AGCTACGGGATCAACACATGCACCTGTCACAGCGCCTCAGCGTCGCCGTG
CAGCGCCTCGCGTTGTGTGAAGTCAAGTCTGGGGAAAGGTATGACTTTCT
CAAAAACGCCCTGACGGAGATGGCATTAAAGCTTGTTAAGGAGGATGATG
TGGTGGCGCTTGGTCCGAATCCGTCGATTCCAGACTTGCTGGCCGAGCTT
GGTATCCAACGGGCAGAGACCGCCCATATTCTGGAGCGACTCGAAGAGGA
GACAGTCGCCTTGCTATCATCATGCACGCAGCTGCAAGGTAGTGTTCAAG
CCCTTGCCACCCGCGACAACCAGTGGGCAGTCCTGGATGCGCGCCTCCAC
GAGCACTATCAGAATTTGGTGAATCATTGTGTCGTCGTTATGGTCCGTCC
TTTTTCACTGTCATCCTCGCAGCCATCCTCCGGGCCAGAGCAGCTCCTAA
AGTTGGAAGGGCGAGCCTTGCTCTTAAAGAACGAGACGCAGGACGTCATT
GCCACTCACAGCTACCGTATAGCCAAGACCATTGCCCTGAAGGCTGACTA
TGACGTGATTCGTAATAGTATGGAGCGCAAGGACTCCTTGACTGACGAGG
AATGCGATGCCAGCATTTCGCAATCGCGCGAGACGTACCTCACGCGGTTC
TTGGACGCCGTCAGGACAGGCGTGGACAAAGCTATTGTCAAAGACACGGG
AATCGGCATGAGGGAAAGTCTAGCGCAGTTTTACCTGAAGCTGGAACAAG
CAATTCGCTTGGCATTGAGTAAATTTTCTCGTATCCACGTAGGTCGCTCG
TTGTTTGGTAAGATCATTTCGCCTACTCAAGTAACGTGCTTGTCTTGCGA
CCGCTCACTTGTCGAAGAAAAAGGGCTAATGCTTCGCCGGATATCGCTGA
AAAAGGCCGCCACAACAAGTACAGTGACCACGAATGCTACCCCCGCCGGC
ACCACCACAGGCCCGCGGCGCGCCTCCCTTTACCGCGCCAACGCCAGTGG
CTTCAAAACCTTTTCTTTTGTCAGAGAGACTAATTTCCTGGAAAATGTGC
TCAAGGACCAACGTGTTCGACAACCAGTTTCTCGAGGAATCCTCATCCCA
AGCAAGAATACCCCCATCTCAGGCACCACTCCCCCCACTACCCGCCTCGG
GCGACGTGCACCAAGCTACGCCTGGGGATCCTCCAGCGGACATGATGGCC
GAAATCAGAAACTTCCGAGTATTGTCTAG

Synonyms

Publications