NO17G01370.1, NO17G01370.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO17G01370.1
Unique Name	NO17G01370.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3454
Alignment location	chr17:421112..424565 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr17	genome	chr17:421112..424565 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO17G01370.1 vs.
Match: EWM24272.1 (protein nlrc3 [Nannochloropsis gaditana])

HSP 1 Score: 889.8 bits (2298), Expect = 7.700e-255
Identity = 532/952 (55.88%), Postives = 645/952 (67.75%), Query Frame = 0

Query:   35 DSSNGKGSQ-QHHHHHRHHHHQQQQQQQSWEECEGDLPGNQRRLYHTNSSCTFWSEREPGRPGASIARSAQVQHESPLPLPFYAGDILWMLLSFMVQADKVNIVSTCRWLRAERANVLRELVIRQPQQGRAAKGVCVGSSIGLSESTSMASSSSLSGMQSCSLKAAGMLEGMEVTDGEGVEEERSVADGVGEDAGEQLRRQNGTG--CVELGYE----TDVKQPIVSLLQYTPLVRRMRYRGEVCTLAGALISSATPRLSRLLALDLSETHMTPADAHSLAAAFAAGTCPKLNHLDLSDNPEMGEEGAQALGLALEHGALPLLQGLLLFGDKIYGGGLAIARAMQSGGLAQLEILDLSGAALGTACMLELSKVLTDGHCPLLEQLGMSDNNVEEKGVEALAVALGARARAGCAYLCKLHLGGNVVGSRGAEELAKALCQDGCGAKLALLELHSARLGREGICVIAEALKSGACDGLRELWLDDNTEGEEDGGIAVQDVMAVLAAGALPALEALGLNWTGLGSSGAAALASALTSYPRPKLHRLDLRSTSITGTALLPLVDALCKQACPSLRWLDLSGNALFLNGARELARALVGGAGKNLRRLDLHAVGLETEGMREIAQALKINACPELMGLGLALNRIGCQGAVALGDAMAAGGLPHLVGLEVHKNELGDEGVMAISNVLTAGACPLLLYLGMSRSRATDLSLRVLVEGIKTGPGLAKLERLNLQDNWISRDGLARLQETVALVAARGGRLRLEFSGNGAQQILRREAGWILNGTRRICVGFVVGGGAVFGALTIKLA--RACLEILLIEEGGIICSWWALSTLLVLLVVEAAVVGFVQSYGLVRAWKQAPSSSDAVTGAAATNAAAAGAATTGAAATGAAATGAAAVINWDEDDEEDVEVEGGRVPGYVIWAILAGDTAVAALGGMMMCWWNAGLLCLWIAGVIMGFAI 978
            D   G   Q +     +  HH QQ +++S      +LPG Q R+Y +      W             R   V+ +S       +GD+L  +LSFM+Q+D++ +VSTCRWLR ER  VLREL +RQPQQG AA  +    +  L E    + ++  S  QSC+ KA GMLE +EV++ +  ++E           GE L RQ  +     EL       + +++  VSLLQ+TPL+RRMRYRGEV  L  AL   ATP L +LLALDL ET M    A  LAAAFA G CP+L HLDLSDNPE+GE GA ALG ALE GALP LQGLLLFGD+I  GGLAIARAM SG L+ LEILDLSGA LGTAC++ELS+ L  GHCP LEQLG+SDNNVEE GV+ LA+ALG RA AGC++L KLH+GGNVVGS GA++LA+AL +DGCG++L+LLELHSARLG EGI  I EALK+GAC GLRELWLDDNTE  E    AV D+M VLA+GALPAL+ALGLNWTGLG SGAAALA ALT +PRP LHRLDLRSTSITG AL PL DAL +  CPSLRWLDLSGNALFL+GARELARAL  GAG NLRRLDLHAVGLE  G+REIA AL+  ACPELMGLGLALNRIG QGAV LG+A+AAGGL  LVGLE+HKNELGD GV+A+++VL +G+CP+L+YLGMS SRATD+  + LVEGI+ GPGLA+LERLNLQDNWI R GLARL++ V++VAARGGRLRLE SGNG +QI+ REAGWILN T+R CVG +VGGG V GAL I L   R    + L      + S    + + +L  + A +VG  Q +GL+R+W Q   + D  T                    G+   G A          +D+  E  RVPGYV+  ++ GD AV +  GM     +  LL  W  G+I+G  +
Sbjct:   65 DEKEGANQQLEDQQQQQRSHHCQQARERS-----ENLPGGQSRIYSSVVPLCPWGSMVAHTTLFVHPRKVLVESKSS---SLCSGDMLSHVLSFMIQSDRLRMVSTCRWLRQERLYVLRELDMRQPQQGAAADCILWERTATLGEKAKSSCNTGSSVSQSCASKATGMLEALEVSEEDVAQQEEVSIQEQATAGGELLIRQRHSNGKASELSVSPIQGSTLERSAVSLLQHTPLLRRMRYRGEVHYLTRALTCPATPPLRQLLALDLCETSMNARGAKCLAAAFAEGVCPQLGHLDLSDNPEIGEAGAGALGRALEDGALPHLQGLLLFGDRIQNGGLAIARAMASGNLSNLEILDLSGAGLGTACVVELSRTLESGHCPRLEQLGLSDNNVEELGVQCLALALGVRASAGCSHLEKLHVGGNVVGSGGAQKLAQALRRDGCGSRLSLLELHSARLGGEGIREITEALKAGACGGLRELWLDDNTENGERRDEAVHDIMEVLASGALPALQALGLNWTGLGGSGAAALALALTIFPRPNLHRLDLRSTSITGLALAPLADALSRHVCPSLRWLDLSGNALFLSGARELARALKAGAGSNLRRLDLHAVGLEGTGIREIAGALQQRACPELMGLGLALNRIGHQGAVMLGEAIAAGGLAKLVGLELHKNELGDAGVVALTDVLASGSCPMLMYLGMSTSRATDVGAQALVEGIRKGPGLARLERLNLQDNWIGRQGLARLEDIVSVVAARGGRLRLELSGNGTRQIVSREAGWILNSTKRACVGLLVGGGTVIGALAINLVTKRPEYRLALPLRNEALQS----TIMAILYFLGALIVGIAQGHGLLRSWDQGSPAGDFRTN-----------------RWGSFEVGLAG---------QDMTFERRRVPGYVMGVVILGDVAVTST-GMQRSAEDFFLLLEWTIGIIVGIGL 977

The following BLAST results are available for this feature:

BLAST of NO17G01370.1 vs.

BLAST of NO17G01370.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM24272.1	7.700e-255	55.88	protein nlrc3 [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO17G01370	NO17G01370	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01370.1	NO17G01370.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO17G01370.1.cds1	NO17G01370.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:421112..424565-
coding sequence from alignment at chr17:421112..424565-

mRNA sequence

>NO17G01370.1 ID=NO17G01370.1|Name=NO17G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3454bp
GTCACACATGCCTCTTCTTGGATGCCCTGTCCGCCTCGTCTTTGTTTCAA
TTAGTGTAGAAAGGTTCCTGGTCCGCACTATCAGGTGGCACCTCAGCTAG
CTGCGGTATGTCTTGCTTTCTTTGCTCCCACTTATAGTGCCGGACGTTAT
CTTTGGGGATTGAGACAAGCACGTGCATAGAAGATCTGTTCTTCGACACA
ATTACGATGCCCTTGCATCACCCAATTGATCGGATCTGTGCCTTGCTGAC
CACCCGTTCCGCGCACACAACCACACACGGACACACCTTGACGACAGCCT
CGACAATATGCTGCAAGTCCGGGCGCTATCACCACGAAAGTCGACGGCAC
AGACTTCACCTCTGCTGTCCAGCACCATTTGTGGCTGCAGCTCTACACGT
CACGAGGGCGACAGCAGCAATGGTAAAGGATCACAACAACATCACCATCA
CCATCGCCATCATCATCACCAGCAGCAGCAGCAGCAGCAGTCCTGGGAAG
AGTGCGAAGGAGATTTGCCGGGCAACCAGAGGCGCCTGTACCACACCAAT
TCTTCATGCACATTTTGGAGCGAACGTGAACCGGGGAGGCCCGGTGCTTC
CATTGCACGTTCCGCCCAGGTGCAGCACGAATCACCCTTGCCACTACCAT
TTTATGCGGGAGATATACTGTGGATGCTACTCTCCTTTATGGTCCAGGCA
GACAAAGTCAACATTGTCTCCACGTGCCGCTGGCTGCGCGCCGAACGGGC
CAATGTCCTCCGCGAGCTAGTCATACGCCAACCTCAGCAAGGACGAGCGG
CAAAGGGTGTATGCGTAGGGAGCAGCATCGGGTTGAGTGAAAGCACATCG
ATGGCGAGTAGCAGCAGTCTCAGTGGCATGCAGTCTTGCTCATTAAAGGC
TGCCGGGATGTTGGAGGGTATGGAGGTTACTGATGGAGAAGGTGTGGAAG
AGGAAAGGTCGGTAGCGGATGGGGTTGGTGAAGATGCAGGGGAACAGTTG
AGACGACAAAATGGGACAGGATGTGTAGAACTAGGGTATGAAACTGACGT
AAAGCAGCCTATCGTCTCCTTACTGCAATACACTCCCCTCGTCCGCCGTA
TGCGCTACCGGGGCGAGGTCTGCACGCTCGCAGGTGCCCTCATTTCTTCT
GCCACCCCCCGCCTTTCACGACTCCTTGCGCTGGATTTGTCTGAAACGCA
CATGACACCAGCGGATGCACATAGTCTTGCAGCGGCGTTTGCTGCTGGAA
CATGTCCAAAGCTTAATCATCTTGACCTTTCAGATAATCCCGAAATGGGG
GAGGAGGGTGCCCAGGCCTTGGGTCTTGCCTTGGAACATGGGGCTTTACC
ATTGCTGCAGGGTCTGTTGTTGTTCGGGGATAAAATTTATGGGGGGGGGT
TAGCGATCGCGAGGGCTATGCAGAGTGGTGGGTTGGCGCAGCTTGAGATC
CTTGATTTGTCCGGCGCGGCGTTGGGTACGGCGTGTATGCTGGAGTTGAG
CAAAGTGTTGACGGATGGACATTGTCCGCTCTTAGAGCAGCTAGGAATGA
GCGATAATAATGTGGAGGAGAAGGGAGTGGAAGCGCTGGCGGTCGCGCTC
GGGGCGAGAGCAAGGGCGGGTTGCGCCTATTTGTGTAAGCTGCACTTGGG
GGGGAATGTGGTGGGTTCACGAGGAGCGGAGGAGCTAGCCAAGGCGTTGT
GTCAGGATGGTTGTGGAGCAAAACTGGCACTCCTTGAGTTGCATAGTGCT
CGTTTGGGACGTGAGGGCATATGTGTTATTGCCGAAGCTTTGAAGAGTGG
AGCGTGTGATGGCTTAAGGGAGTTGTGGTTGGACGATAATACAGAAGGAG
AGGAGGATGGAGGGATTGCGGTGCAAGATGTCATGGCTGTGCTAGCTGCG
GGTGCATTACCAGCTCTGGAAGCTCTCGGGTTGAATTGGACAGGGTTGGG
GAGTAGTGGTGCGGCAGCCTTGGCTTCAGCTCTTACTTCTTATCCTCGTC
CTAAGTTGCATCGGCTCGATTTGAGGTCTACCTCTATCACCGGGACGGCC
CTTTTACCCCTGGTGGATGCGTTGTGTAAGCAGGCGTGCCCTTCCCTGCG
TTGGTTGGACCTGAGTGGAAATGCCCTCTTTCTTAACGGGGCGCGAGAAC
TGGCCCGAGCGCTCGTAGGAGGGGCAGGAAAGAACTTGCGGAGACTGGAT
TTACATGCCGTTGGGCTGGAAACGGAGGGGATGAGAGAGATCGCGCAGGC
ATTAAAGATTAATGCATGTCCTGAGTTAATGGGGTTGGGCTTGGCTTTGA
ATCGGATAGGGTGCCAGGGAGCGGTGGCTTTGGGAGATGCTATGGCGGCA
GGGGGATTACCGCATTTGGTGGGGTTGGAAGTGCATAAGAATGAGTTAGG
GGATGAAGGAGTGATGGCGATTTCGAATGTTTTGACTGCAGGGGCCTGTC
CGCTACTGCTTTACCTTGGGATGTCGCGGAGTCGAGCGACTGATTTGAGT
TTGCGCGTGTTGGTGGAAGGGATAAAAACAGGTCCTGGCCTGGCAAAGCT
CGAGCGGCTGAATCTTCAAGATAATTGGATCAGTAGAGATGGCTTGGCGC
GGTTACAAGAGACTGTGGCTCTAGTTGCAGCTCGGGGCGGGAGACTTCGG
TTAGAATTTTCGGGGAATGGGGCTCAGCAGATTTTGAGGAGGGAGGCAGG
GTGGATTTTGAATGGTACCCGGCGCATCTGTGTGGGATTTGTAGTGGGAG
GAGGTGCAGTTTTTGGGGCATTAACTATCAAACTTGCGAGGGCGTGCTTG
GAGATTCTTCTGATAGAGGAGGGGGGGATTATTTGCTCGTGGTGGGCTTT
GTCGACTTTGCTAGTGTTGCTTGTGGTGGAGGCTGCTGTGGTCGGCTTTG
TGCAGAGCTATGGTCTTGTCCGGGCTTGGAAACAAGCACCTAGCAGTAGC
GACGCTGTAACTGGTGCTGCTGCTACTAATGCTGCGGCTGCTGGTGCTGC
TACTACTGGCGCCGCTGCTACTGGTGCTGCTGCTACTGGTGCTGCTGCTG
TTATTAATTGGGATGAGGATGACGAAGAGGACGTGGAGGTCGAGGGGGGT
CGGGTGCCTGGATATGTCATTTGGGCGATTCTGGCGGGGGATACGGCTGT
GGCGGCGTTGGGGGGCATGATGATGTGTTGGTGGAATGCGGGACTGCTTT
GTCTGTGGATAGCTGGGGTCATCATGGGCTTTGCAATTGTATTGGGGAAG
GCTGGGGGATATTGAAAAATGGTGAGAGGAGAGAAGGAAAAGACGACTGT
TGACTTTATGACTGACTAATTAAGTTTGTTCTGTGCAGAAGGGAAAAGAA
AAGATGATGAGCCAGTGAAAGAAAAGAAATGGAAAAGAAGATAAAGAAAT
TCATTTAAAAAAGAAAGAGCTCATAGCCAATCGCATTGTCTAATCAGACT
TATT

protein sequence of NO17G01370.1

>NO17G01370.1-protein ID=NO17G01370.1-protein|Name=NO17G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=986bp
MLQVRALSPRKSTAQTSPLLSSTICGCSSTRHEGDSSNGKGSQQHHHHHR
HHHHQQQQQQQSWEECEGDLPGNQRRLYHTNSSCTFWSEREPGRPGASIA
RSAQVQHESPLPLPFYAGDILWMLLSFMVQADKVNIVSTCRWLRAERANV
LRELVIRQPQQGRAAKGVCVGSSIGLSESTSMASSSSLSGMQSCSLKAAG
MLEGMEVTDGEGVEEERSVADGVGEDAGEQLRRQNGTGCVELGYETDVKQ
PIVSLLQYTPLVRRMRYRGEVCTLAGALISSATPRLSRLLALDLSETHMT
PADAHSLAAAFAAGTCPKLNHLDLSDNPEMGEEGAQALGLALEHGALPLL
QGLLLFGDKIYGGGLAIARAMQSGGLAQLEILDLSGAALGTACMLELSKV
LTDGHCPLLEQLGMSDNNVEEKGVEALAVALGARARAGCAYLCKLHLGGN
VVGSRGAEELAKALCQDGCGAKLALLELHSARLGREGICVIAEALKSGAC
DGLRELWLDDNTEGEEDGGIAVQDVMAVLAAGALPALEALGLNWTGLGSS
GAAALASALTSYPRPKLHRLDLRSTSITGTALLPLVDALCKQACPSLRWL
DLSGNALFLNGARELARALVGGAGKNLRRLDLHAVGLETEGMREIAQALK
INACPELMGLGLALNRIGCQGAVALGDAMAAGGLPHLVGLEVHKNELGDE
GVMAISNVLTAGACPLLLYLGMSRSRATDLSLRVLVEGIKTGPGLAKLER
LNLQDNWISRDGLARLQETVALVAARGGRLRLEFSGNGAQQILRREAGWI
LNGTRRICVGFVVGGGAVFGALTIKLARACLEILLIEEGGIICSWWALST
LLVLLVVEAAVVGFVQSYGLVRAWKQAPSSSDAVTGAAATNAAAAGAATT
GAAATGAAATGAAAVINWDEDDEEDVEVEGGRVPGYVIWAILAGDTAVAA
LGGMMMCWWNAGLLCLWIAGVIMGFAIVLGKAGGY*

mRNA from alignment at chr17:421112..424565-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO17G01370.1 ID=NO17G01370.1|Name=NO17G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3454bp|location=Sequence derived from alignment at chr17:421112..424565- (Nannochloropsis oceanica)
GTCACACATGCCTCTTCTTGGATGCCCTGTCCGCCTCGTCTTTGTTTCAA
TTAGTGTAGAAAGGTTCCTGGTCCGCACTATCAGGTGGCACCTCAGCTAG
CTGCGGTATGTCTTGCTTTCTTTGCTCCCACTTATAGTGCCGGACGTTAT
CTTTGGGGATTGAGACAAGCACGTGCATAGAAGATCTGTTCTTCGACACA
ATTACGATGCCCTTGCATCACCCAATTGATCGGATCTGTGCCTTGCTGAC
CACCCGTTCCGCGCACACAACCACACACGGACACACCTTGACGACAGCCT
CGACAATATGCTGCAAGTCCGGGCGCTATCACCACGAAAGTCGACGGCAC
AGACTTCACCTCTGCTGTCCAGCACCATTTGTGGCTGCAGCTCTACACGT
CACGAGGGCGACAGCAGCAATGGTAAAGGATCACAACAACATCACCATCA
CCATCGCCATCATCATCACCAGCAGCAGCAGCAGCAGCAGTCCTGGGAAG
AGTGCGAAGGAGATTTGCCGGGCAACCAGAGGCGCCTGTACCACACCAAT
TCTTCATGCACATTTTGGAGCGAACGTGAACCGGGGAGGCCCGGTGCTTC
CATTGCACGTTCCGCCCAGGTGCAGCACGAATCACCCTTGCCACTACCAT
TTTATGCGGGAGATATACTGTGGATGCTACTCTCCTTTATGGTCCAGGCA
GACAAAGTCAACATTGTCTCCACGTGCCGCTGGCTGCGCGCCGAACGGGC
CAATGTCCTCCGCGAGCTAGTCATACGCCAACCTCAGCAAGGACGAGCGG
CAAAGGGTGTATGCGTAGGGAGCAGCATCGGGTTGAGTGAAAGCACATCG
ATGGCGAGTAGCAGCAGTCTCAGTGGCATGCAGTCTTGCTCATTAAAGGC
TGCCGGGATGTTGGAGGGTATGGAGGTTACTGATGGAGAAGGTGTGGAAG
AGGAAAGGTCGGTAGCGGATGGGGTTGGTGAAGATGCAGGGGAACAGTTG
AGACGACAAAATGGGACAGGATGTGTAGAACTAGGGTATGAAACTGACGT
AAAGCAGCCTATCGTCTCCTTACTGCAATACACTCCCCTCGTCCGCCGTA
TGCGCTACCGGGGCGAGGTCTGCACGCTCGCAGGTGCCCTCATTTCTTCT
GCCACCCCCCGCCTTTCACGACTCCTTGCGCTGGATTTGTCTGAAACGCA
CATGACACCAGCGGATGCACATAGTCTTGCAGCGGCGTTTGCTGCTGGAA
CATGTCCAAAGCTTAATCATCTTGACCTTTCAGATAATCCCGAAATGGGG
GAGGAGGGTGCCCAGGCCTTGGGTCTTGCCTTGGAACATGGGGCTTTACC
ATTGCTGCAGGGTCTGTTGTTGTTCGGGGATAAAATTTATGGGGGGGGGT
TAGCGATCGCGAGGGCTATGCAGAGTGGTGGGTTGGCGCAGCTTGAGATC
CTTGATTTGTCCGGCGCGGCGTTGGGTACGGCGTGTATGCTGGAGTTGAG
CAAAGTGTTGACGGATGGACATTGTCCGCTCTTAGAGCAGCTAGGAATGA
GCGATAATAATGTGGAGGAGAAGGGAGTGGAAGCGCTGGCGGTCGCGCTC
GGGGCGAGAGCAAGGGCGGGTTGCGCCTATTTGTGTAAGCTGCACTTGGG
GGGGAATGTGGTGGGTTCACGAGGAGCGGAGGAGCTAGCCAAGGCGTTGT
GTCAGGATGGTTGTGGAGCAAAACTGGCACTCCTTGAGTTGCATAGTGCT
CGTTTGGGACGTGAGGGCATATGTGTTATTGCCGAAGCTTTGAAGAGTGG
AGCGTGTGATGGCTTAAGGGAGTTGTGGTTGGACGATAATACAGAAGGAG
AGGAGGATGGAGGGATTGCGGTGCAAGATGTCATGGCTGTGCTAGCTGCG
GGTGCATTACCAGCTCTGGAAGCTCTCGGGTTGAATTGGACAGGGTTGGG
GAGTAGTGGTGCGGCAGCCTTGGCTTCAGCTCTTACTTCTTATCCTCGTC
CTAAGTTGCATCGGCTCGATTTGAGGTCTACCTCTATCACCGGGACGGCC
CTTTTACCCCTGGTGGATGCGTTGTGTAAGCAGGCGTGCCCTTCCCTGCG
TTGGTTGGACCTGAGTGGAAATGCCCTCTTTCTTAACGGGGCGCGAGAAC
TGGCCCGAGCGCTCGTAGGAGGGGCAGGAAAGAACTTGCGGAGACTGGAT
TTACATGCCGTTGGGCTGGAAACGGAGGGGATGAGAGAGATCGCGCAGGC
ATTAAAGATTAATGCATGTCCTGAGTTAATGGGGTTGGGCTTGGCTTTGA
ATCGGATAGGGTGCCAGGGAGCGGTGGCTTTGGGAGATGCTATGGCGGCA
GGGGGATTACCGCATTTGGTGGGGTTGGAAGTGCATAAGAATGAGTTAGG
GGATGAAGGAGTGATGGCGATTTCGAATGTTTTGACTGCAGGGGCCTGTC
CGCTACTGCTTTACCTTGGGATGTCGCGGAGTCGAGCGACTGATTTGAGT
TTGCGCGTGTTGGTGGAAGGGATAAAAACAGGTCCTGGCCTGGCAAAGCT
CGAGCGGCTGAATCTTCAAGATAATTGGATCAGTAGAGATGGCTTGGCGC
GGTTACAAGAGACTGTGGCTCTAGTTGCAGCTCGGGGCGGGAGACTTCGG
TTAGAATTTTCGGGGAATGGGGCTCAGCAGATTTTGAGGAGGGAGGCAGG
GTGGATTTTGAATGGTACCCGGCGCATCTGTGTGGGATTTGTAGTGGGAG
GAGGTGCAGTTTTTGGGGCATTAACTATCAAACTTGCGAGGGCGTGCTTG
GAGATTCTTCTGATAGAGGAGGGGGGGATTATTTGCTCGTGGTGGGCTTT
GTCGACTTTGCTAGTGTTGCTTGTGGTGGAGGCTGCTGTGGTCGGCTTTG
TGCAGAGCTATGGTCTTGTCCGGGCTTGGAAACAAGCACCTAGCAGTAGC
GACGCTGTAACTGGTGCTGCTGCTACTAATGCTGCGGCTGCTGGTGCTGC
TACTACTGGCGCCGCTGCTACTGGTGCTGCTGCTACTGGTGCTGCTGCTG
TTATTAATTGGGATGAGGATGACGAAGAGGACGTGGAGGTCGAGGGGGGT
CGGGTGCCTGGATATGTCATTTGGGCGATTCTGGCGGGGGATACGGCTGT
GGCGGCGTTGGGGGGCATGATGATGTGTTGGTGGAATGCGGGACTGCTTT
GTCTGTGGATAGCTGGGGTCATCATGGGCTTTGCAATTGTATTGGGGAAG
GCTGGGGGATATTGAAAAATGGTGAGAGGAGAGAAGGAAAAGACGACTGT
TGACTTTATGACTGACTAATTAAGTTTGTTCTGTGCAGAAGGGAAAAGAA
AAGATGATGAGCCAGTGAAAGAAAAGAAATGGAAAAGAAGATAAAGAAAT
TCATTTAAAAAAGAAAGAGCTCATAGCCAATCGCATTGTCTAATCAGACT
TATT

Coding sequence (CDS) from alignment at chr17:421112..424565-

>NO17G01370.1 ID=NO17G01370.1|Name=NO17G01370.1|organism=Nannochloropsis oceanica|type=CDS|length=2958bp|location=Sequence derived from alignment at chr17:421112..424565- (Nannochloropsis oceanica)
ATGCTGCAAGTCCGGGCGCTATCACCACGAAAGTCGACGGCACAGACTTC
ACCTCTGCTGTCCAGCACCATTTGTGGCTGCAGCTCTACACGTCACGAGG
GCGACAGCAGCAATGGTAAAGGATCACAACAACATCACCATCACCATCGC
CATCATCATCACCAGCAGCAGCAGCAGCAGCAGTCCTGGGAAGAGTGCGA
AGGAGATTTGCCGGGCAACCAGAGGCGCCTGTACCACACCAATTCTTCAT
GCACATTTTGGAGCGAACGTGAACCGGGGAGGCCCGGTGCTTCCATTGCA
CGTTCCGCCCAGGTGCAGCACGAATCACCCTTGCCACTACCATTTTATGC
GGGAGATATACTGTGGATGCTACTCTCCTTTATGGTCCAGGCAGACAAAG
TCAACATTGTCTCCACGTGCCGCTGGCTGCGCGCCGAACGGGCCAATGTC
CTCCGCGAGCTAGTCATACGCCAACCTCAGCAAGGACGAGCGGCAAAGGG
TGTATGCGTAGGGAGCAGCATCGGGTTGAGTGAAAGCACATCGATGGCGA
GTAGCAGCAGTCTCAGTGGCATGCAGTCTTGCTCATTAAAGGCTGCCGGG
ATGTTGGAGGGTATGGAGGTTACTGATGGAGAAGGTGTGGAAGAGGAAAG
GTCGGTAGCGGATGGGGTTGGTGAAGATGCAGGGGAACAGTTGAGACGAC
AAAATGGGACAGGATGTGTAGAACTAGGGTATGAAACTGACGTAAAGCAG
CCTATCGTCTCCTTACTGCAATACACTCCCCTCGTCCGCCGTATGCGCTA
CCGGGGCGAGGTCTGCACGCTCGCAGGTGCCCTCATTTCTTCTGCCACCC
CCCGCCTTTCACGACTCCTTGCGCTGGATTTGTCTGAAACGCACATGACA
CCAGCGGATGCACATAGTCTTGCAGCGGCGTTTGCTGCTGGAACATGTCC
AAAGCTTAATCATCTTGACCTTTCAGATAATCCCGAAATGGGGGAGGAGG
GTGCCCAGGCCTTGGGTCTTGCCTTGGAACATGGGGCTTTACCATTGCTG
CAGGGTCTGTTGTTGTTCGGGGATAAAATTTATGGGGGGGGGTTAGCGAT
CGCGAGGGCTATGCAGAGTGGTGGGTTGGCGCAGCTTGAGATCCTTGATT
TGTCCGGCGCGGCGTTGGGTACGGCGTGTATGCTGGAGTTGAGCAAAGTG
TTGACGGATGGACATTGTCCGCTCTTAGAGCAGCTAGGAATGAGCGATAA
TAATGTGGAGGAGAAGGGAGTGGAAGCGCTGGCGGTCGCGCTCGGGGCGA
GAGCAAGGGCGGGTTGCGCCTATTTGTGTAAGCTGCACTTGGGGGGGAAT
GTGGTGGGTTCACGAGGAGCGGAGGAGCTAGCCAAGGCGTTGTGTCAGGA
TGGTTGTGGAGCAAAACTGGCACTCCTTGAGTTGCATAGTGCTCGTTTGG
GACGTGAGGGCATATGTGTTATTGCCGAAGCTTTGAAGAGTGGAGCGTGT
GATGGCTTAAGGGAGTTGTGGTTGGACGATAATACAGAAGGAGAGGAGGA
TGGAGGGATTGCGGTGCAAGATGTCATGGCTGTGCTAGCTGCGGGTGCAT
TACCAGCTCTGGAAGCTCTCGGGTTGAATTGGACAGGGTTGGGGAGTAGT
GGTGCGGCAGCCTTGGCTTCAGCTCTTACTTCTTATCCTCGTCCTAAGTT
GCATCGGCTCGATTTGAGGTCTACCTCTATCACCGGGACGGCCCTTTTAC
CCCTGGTGGATGCGTTGTGTAAGCAGGCGTGCCCTTCCCTGCGTTGGTTG
GACCTGAGTGGAAATGCCCTCTTTCTTAACGGGGCGCGAGAACTGGCCCG
AGCGCTCGTAGGAGGGGCAGGAAAGAACTTGCGGAGACTGGATTTACATG
CCGTTGGGCTGGAAACGGAGGGGATGAGAGAGATCGCGCAGGCATTAAAG
ATTAATGCATGTCCTGAGTTAATGGGGTTGGGCTTGGCTTTGAATCGGAT
AGGGTGCCAGGGAGCGGTGGCTTTGGGAGATGCTATGGCGGCAGGGGGAT
TACCGCATTTGGTGGGGTTGGAAGTGCATAAGAATGAGTTAGGGGATGAA
GGAGTGATGGCGATTTCGAATGTTTTGACTGCAGGGGCCTGTCCGCTACT
GCTTTACCTTGGGATGTCGCGGAGTCGAGCGACTGATTTGAGTTTGCGCG
TGTTGGTGGAAGGGATAAAAACAGGTCCTGGCCTGGCAAAGCTCGAGCGG
CTGAATCTTCAAGATAATTGGATCAGTAGAGATGGCTTGGCGCGGTTACA
AGAGACTGTGGCTCTAGTTGCAGCTCGGGGCGGGAGACTTCGGTTAGAAT
TTTCGGGGAATGGGGCTCAGCAGATTTTGAGGAGGGAGGCAGGGTGGATT
TTGAATGGTACCCGGCGCATCTGTGTGGGATTTGTAGTGGGAGGAGGTGC
AGTTTTTGGGGCATTAACTATCAAACTTGCGAGGGCGTGCTTGGAGATTC
TTCTGATAGAGGAGGGGGGGATTATTTGCTCGTGGTGGGCTTTGTCGACT
TTGCTAGTGTTGCTTGTGGTGGAGGCTGCTGTGGTCGGCTTTGTGCAGAG
CTATGGTCTTGTCCGGGCTTGGAAACAAGCACCTAGCAGTAGCGACGCTG
TAACTGGTGCTGCTGCTACTAATGCTGCGGCTGCTGGTGCTGCTACTACT
GGCGCCGCTGCTACTGGTGCTGCTGCTACTGGTGCTGCTGCTGTTATTAA
TTGGGATGAGGATGACGAAGAGGACGTGGAGGTCGAGGGGGGTCGGGTGC
CTGGATATGTCATTTGGGCGATTCTGGCGGGGGATACGGCTGTGGCGGCG
TTGGGGGGCATGATGATGTGTTGGTGGAATGCGGGACTGCTTTGTCTGTG
GATAGCTGGGGTCATCATGGGCTTTGCAATTGTATTGGGGAAGGCTGGGG
GATATTGA

Synonyms

Publications