NO15G03240.1, NO15G03240.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G03240.1
Unique Name	NO15G03240.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3236
Alignment location	chr15:936696..941606 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:936696..941606 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO15G03240.1 vs.
Match: EWM22274.1 (hypothetical protein Naga_100960g1 [Nannochloropsis gaditana])

HSP 1 Score: 228.0 bits (580), Expect = 1.300e-55
Identity = 131/224 (58.48%), Postives = 157/224 (70.09%), Query Frame = 0

Query:    3 TTESTTISRRRLPWAQCHFRGQDLICLGVGNEALIIDGASRLELQRVSNGCERRKKQQQQLQQQQLTAE--EEEEVAGVLAEAVAEGEEERD-DAVVGVAWGDARGVLAALWESGTLAIAENPTATGAWSVVSWFHIRNAEEEYEKEEKGGDGERHGAEKEKEKGKRKKRGPLIPLDASVTLSWSSHALLLAWGRSLQVFAFYDWHERAMKSGGGSGGGGGGGG 224
            T ++TT SR+RLPWAQCHFRGQDLICLGVG++AL++D ASRLELQR+S+    RKKQ    Q    +A+  E+E  + +       GE+ +  D VVGVAWG +RGVLA LW++GTLAIAENPT TGAWSVVSWFHIRN EEE             G E+  E   R + G  IP +A+VT+ WS+HALL+AWGRSLQVFAFYDWHERA K   G  GGGG GG
Sbjct:    2 TRKNTTTSRQRLPWAQCHFRGQDLICLGVGSDALLLDSASRLELQRLSSE-GGRKKQHLHDQSDVSSAQHGEDESPSAMARNGSISGEDPQGIDLVVGVAWGPSRGVLAVLWDNGTLAIAENPTITGAWSVVSWFHIRNPEEE------------EGREEASETAPRHRGGAFIPPEANVTVRWSNHALLVAWGRSLQVFAFYDWHERAKKLQAGQNGGGGEGG 212

The following BLAST results are available for this feature:

BLAST of NO15G03240.1 vs.

BLAST of NO15G03240.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM22274.1	1.300e-55	58.48	hypothetical protein Naga_100960g1 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO15G03240	NO15G03240	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03240.1	NO15G03240.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO15G03240.1.cds1	NO15G03240.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds2	NO15G03240.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds3	NO15G03240.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds4	NO15G03240.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds5	NO15G03240.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds6	NO15G03240.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds7	NO15G03240.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds8	NO15G03240.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds9	NO15G03240.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO15G03240.1.cds10	NO15G03240.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr15:936696..941606+
coding sequence from alignment at chr15:936696..941606+

mRNA sequence

>NO15G03240.1 ID=NO15G03240.1|Name=NO15G03240.1|organism=Nannochloropsis oceanica|type=mRNA|length=3236bp
ACAGGCATCTGACTCTCTAGGTGTGCTTGCGTGACTCATCGCTCACAACT
CAGGCAACCGACGACGATCAGCGACGAAGGCGCAAGCTGGCCGAACGAGA
CACAGGGCCGGATTATCATGAGGAGGCAGGCCGTCGCGGCACCTGCGTTT
TGACCTACGAAATCGTCCACATAAAATACGCACAGCGCAGCGTCATGACA
ACGACGGAGAGTACAACAATAAGCCGACGGCGGCTTCCGTGGGCGCAATG
CCATTTCCGAGGACAGGACTTGATATGCCTGGGTGTGGGCAACGAAGCCC
TCATTATTGACGGAGCGTCGCGCCTGGAACTTCAACGCGTGTCCAATGGA
TGCGAGAGACGAAAGAAGCAGCAGCAGCAGCTACAGCAACAGCAGCTGAC
AGCAGAGGAAGAAGAGGAGGTGGCCGGGGTCTTAGCAGAGGCGGTGGCTG
AGGGAGAAGAAGAGAGGGATGATGCCGTCGTGGGCGTGGCATGGGGGGAC
GCGCGCGGCGTTTTGGCGGCGCTGTGGGAGAGCGGCACTCTGGCTATTGC
CGAGAACCCAACCGCGACGGGTGCATGGTCTGTGGTGAGCTGGTTTCATA
TTCGTAACGCCGAGGAGGAGTACGAGAAGGAGGAGAAGGGTGGCGACGGG
GAAAGGCACGGGGCGGAGAAGGAGAAAGAGAAGGGAAAGAGGAAGAAGAG
GGGGCCGCTGATCCCACTGGACGCGTCGGTGACGTTGAGCTGGTCCAGCC
ACGCGCTGCTTCTGGCTTGGGGTCGCTCTCTTCAGGTTTTTGCCTTCTAT
GACTGGCACGAGCGGGCCATGAAGAGTGGTGGAGGGAGCGGGGGAGGAGG
AGGAGGAGGAGGAGGCAGGGGGGCGTTGCGGCGGCTGCTGCATTACCGTC
TTCCTCTTCCTCATTTGACGGCAGACCTATGCCCGGATGGCAATTTTTTA
GCTGTGTCCTACCTCGATGAGGAGCAGACGGATGTGCACGTCTGGTCGGT
ACTCGCTTCCTCCTCCACCTCCTCCTCCTCATCTGCCTCCTCCTCCTCCT
CCTCCTCCTCTTCATCCTCCTCCTCCTCCACGCCAGCGTCTTCCTCTTCC
ACCTTGCCAGCAGACCCCCCTTCCTCCCGCTCCGCCTCCATGGACGGGAC
ATCTCACCCAAGCCCCGCCACTGCAGCCACGGCCAATAGCAGCAGCATCA
GCAGCAGCATCACCGACCCCCCCCCGCCTCCCATTGCGACGTTAGGCCAC
CGGTCTCCTGCGCATGTGGTTGAATGGCGGTCGGGCTTGCCTGGGGTCCT
GTCCATCCTCATGACGTGCTGTGGAACGGACAACCAGCTCCACATCTGGG
CCGAAGCCCGCGCCCTTGCCCCTTCCTCCCTCCCTCCCTCCTTCTCCTCC
AGCACGGATTCTCCCGCCTCCTCTCCCCGGAACACGACGGCTGCCTCCTC
CTCCTCCCTCCTACCTACGACCTTTCATCTCTGGCTGTCTATCCCATCAT
TCGCGCCATTGGGGTCGGCCGTGACGTGGCTCCGGTGGGCCAATTTTGGG
AGCACGCGGGCGTCGCAGCACCTCGCTGCCCGTGTCCGGCAACACGGCCT
CGATGACGGCAATAGAGGCGCACTGCTCCTCAAGACAGTGGCAGGCTCTT
GGATTGTGGGAATGGAGGCGACAGGCACGATTAGAATTTGGTGCATCGTG
CACCCGCAGGATTCACAGCCCGGTGACCCTAAGCTGAAGGAACATGCCAG
GGTAGTTGAAGTTGCAGCCCGCGCCTCCTGGCCCAGCTGGACCGCTTCCT
CCTTCGGCCCCTCTCTCTTCAAGGACACTCTCCCTCCCGCCCTCCCTCCC
CATGCCATCACCCCAGTGAAGGGCAGCACGGCCGTGGTCAACAGAGATGA
TCCTGTCACTCCTCTTACCACTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCATCTGCCAGGAAGGCGGCGCCTGCCACCCCCCTCGCCCTCCTCGGC
CTGGGGCCGCGTGTAAGCGCCACGGGCTTCTTTGACCCCCGGGGGGTAGG
CGTCCCGGCTGAGATCGGCATGGTCCTCAAGCCCGACTTCCTCGCTCCCT
GCCCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTCCTCCCTTCCCACGGCC
GCGCAGCTTCACCGTGACTCCCGTCGGCTTCTCCTCACCACCCTCGGCAC
GTCCCTGGCCCATAATGGAGGTCTTCATGTCCATTGCCTCTCAGGCACCG
TTCTCGATGCCGCGCTGGTAGTTCGAGAGGGTTCCTCCGCCTCCTCCCTC
CTCCCTTCCTCCTCTCCCTCCTCCTCTTCCTGCAGGACAAGCCTCCCCCC
CACCTCCACCTCCCTTCACCCTTTCTCCTCCTTCTCCCCTCCCCTCTTCC
ACCCCTCCCTCCCTTTCCTTGTCCGCAAGGCTCCCAATTTCAATGGCGGC
CCCGGCGACCCGCCTGTCCTGAACACTGCCTTCCTCCCCCACCTCGCCCC
TCCACTCTACACTCTCCCCTCCCTCCCTCAGCCCCTCCCCCTCCCCCTCC
CCTCCATCGTTCTTCCCCGCGGGAAAACGCCGGAACACGTCTTGTGGGTG
GTCCATGCCGGCACCCCGCCCTCCCTCCCGCCCTCCCTCCCACCCTCCCT
CTTGGTGTTGGACACGACGCGAGGCCTTTATCTCTACACGGCCCAGCGGG
CGAGATCCAAGCTCCCTGTCCCTTCCCTTTTCCCACCCTGCTGGTCTGTC
GAAGAAGATGGAAGAGGGGAAGGGGAAGGAGGTGGAGGAGAAGCAGAAGG
AGGGGAGGGAGAGAGGGAGGGAGTGAGGGAGGGAGGGAAAACATGGATTT
CGTTGAGTAGACCGGGATCGCCCACGAACATGACCGAGCGCCTCGTGTCC
TTCCCGCCCTCCTCCCCCTCCTCCTCCCTCTCCTCCTACACCGTGTCGCT
CCTCCCCGATCCCATCTACGGCCTGGGCATGCGTCTGGAGAAGAGAGAGG
ACTTTGTCCACGTGGCCTCTTTCAAGCGACACCCTCAAACAAACGCCCTC
CTCCCCGCGGAAGCGCACGCAGCCAGGGAGAGGGAGGGAGGGCGGGAGGG
TGGGATAGAGGTGGGCGATGCGCTGGTGGGTGTCAATGGGTATTCCCTTG
TGGGGATGGAGCTGGAGCAGGCCGTAGGGGTGATGAGGAGTGTAGGGGCT
GGGAAGGGAGGGAGGGGGGAGGAATGGGAGGCGTAG

protein sequence of NO15G03240.1

>NO15G03240.1-protein ID=NO15G03240.1-protein|Name=NO15G03240.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1014bp
MTTTESTTISRRRLPWAQCHFRGQDLICLGVGNEALIIDGASRLELQRVS
NGCERRKKQQQQLQQQQLTAEEEEEVAGVLAEAVAEGEEERDDAVVGVAW
GDARGVLAALWESGTLAIAENPTATGAWSVVSWFHIRNAEEEYEKEEKGG
DGERHGAEKEKEKGKRKKRGPLIPLDASVTLSWSSHALLLAWGRSLQVFA
FYDWHERAMKSGGGSGGGGGGGGGRGALRRLLHYRLPLPHLTADLCPDGN
FLAVSYLDEEQTDVHVWSVLASSSTSSSSSASSSSSSSSSSSSSSTPASS
SSTLPADPPSSRSASMDGTSHPSPATAATANSSSISSSITDPPPPPIATL
GHRSPAHVVEWRSGLPGVLSILMTCCGTDNQLHIWAEARALAPSSLPPSF
SSSTDSPASSPRNTTAASSSSLLPTTFHLWLSIPSFAPLGSAVTWLRWAN
FGSTRASQHLAARVRQHGLDDGNRGALLLKTVAGSWIVGMEATGTIRIWC
IVHPQDSQPGDPKLKEHARVVEVAARASWPSWTASSFGPSLFKDTLPPAL
PPHAITPVKGSTAVVNRDDPVTPLTTAAAAAAAAAAASARKAAPATPLAL
LGLGPRVSATGFFDPRGVGVPAEIGMVLKPDFLAPCPSPSSSSSPSSSLP
TAAQLHRDSRRLLLTTLGTSLAHNGGLHVHCLSGTVLDAALVVREGSSAS
SLLPSSSPSSSSCRTSLPPTSTSLHPFSSFSPPLFHPSLPFLVRKAPNFN
GGPGDPPVLNTAFLPHLAPPLYTLPSLPQPLPLPLPSIVLPRGKTPEHVL
WVVHAGTPPSLPPSLPPSLLVLDTTRGLYLYTAQRARSKLPVPSLFPPCW
SVEEDGRGEGEGGGGEAEGGEGEREGVREGGKTWISLSRPGSPTNMTERL
VSFPPSSPSSSLSSYTVSLLPDPIYGLGMRLEKREDFVHVASFKRHPQTN
ALLPAEAHAAREREGGREGGIEVGDALVGVNGYSLVGMELEQAVGVMRSV
GAGKGGRGEEWEA*

mRNA from alignment at chr15:936696..941606+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO15G03240.1 ID=NO15G03240.1|Name=NO15G03240.1|organism=Nannochloropsis oceanica|type=mRNA|length=4911bp|location=Sequence derived from alignment at chr15:936696..941606+ (Nannochloropsis oceanica)
ACAGGCATCTGACTCTCTAGGTGTGCTTGCGTGACTCATCGCTCACAACT
CAGGCAACCGACGACGATCAGCGACGAAGGCGCAAGCTGGCCGAACGAGA
CACAGGGCCGGATTATCATGAGGAGGCAGGCCGTCGCGGCACCTGCGTTT
TGACCTACGAAATCGTCCACATAAAATACGCACAGCGCAGCGTCATGACA
ACGACGGAGAGTACAACAATAAGCCGACGGCGGCTTCCGTGGGCGCAATG
CCATTTCCGAGGACAGGTGCGTAGGAATGGAATGCATATGGTTTTGTGAA
GAAGGCACCGTCCCGAACCCCCGTGCGGTGCTTCCTTCTCCTTCCCCCAT
CCCACGATTTACACTCTGCTCTCCCCTTCTTCTACATATATTCTTACGCT
GACATGCCCCATTTCTCTTTCCCACTCTTCTTTCGCATCGGTTCCAAAGG
ACTTGATATGCCTGGGTGTGGGCAACGAAGCCCTCATTATTGACGGAGCG
TCGCGCCTGGAACTTCAACGCGTGTCCAATGGATGCGAGAGACGAAAGAA
GCAGCAGCAGCAGCTACAGCAACAGCAGCTGACAGCAGAGGAAGAAGAGG
AGGTGGCCGGGGTCTTAGCAGAGGCGGTGGCTGAGGGAGAAGAAGAGAGG
GATGATGCCGTCGTGGGCGTGGCATGGGGGGACGCGCGCGGCGTTTTGGC
GGCGCTGTGGGAGAGCGGCACTCTGGCTATTGCCGAGAACCCAACCGCGA
CGGGTGCATGGTCTGTGGTGAGCTGGTTTCATATTCGTAACGCCGAGGAG
GAGTACGAGAAGGAGGAGAAGGGTGGCGACGGGGAAAGGCACGGGGCGGA
GAAGGAGAAAGAGAAGGGAAAGAGGAAGAAGAGGGGGCCGCTGATCCCAC
TGGACGCGTCGGTGACGTTGAGCTGGTCCAGCCACGCGCTGCTTCTGGCT
TGGGGTCGCTCTCTTCAGGTTTTTGCCTTCTATGACTGGCACGAGCGGGC
CATGAAGAGTGGTGGAGGGAGCGGGGGAGGAGGAGGAGGAGGAGGAGGCA
GGGGGGCGTTGCGGCGGCTGCTGCATTACCGTCTTCCTCTTCCTCATTTG
ACGGCAGACCTATGCCCGGATGGCAATTTTTTAGCTGTGTCCTACCTCGA
TGAGGAGCAGACGGATGTGCACGTCTGGTCGGTACTCGCTTCCTCCTCCA
CCTCCTCCTCCTCATCTGCCTCCTCCTCCTCCTCCTCCTCCTCTTCATCC
TCCTCCTCCTCCACGCCAGCGTCTTCCTCTTCCACCTTGCCAGCAGGTAC
ACATTATTTTGGTTGATCTTTTTGACCATCGTACTCCTGGCTCTTCATCT
GTCTTACCACATTCTGTCTCATTCACCTGCACAGACCCCCCTTCCTCCCG
CTCCGCCTCCATGGACGGGACATCTCACCCAAGCCCCGCCACTGCAGCCA
CGGCCAATAGCAGCAGCATCAGCAGCAGCATCACCGACCCCCCCCCGCCT
CCCATTGCGACGTTAGGCCACCGGTCTCCTGCGCATGTGGTTGAATGGCG
GTCGGGCTTGCCTGGGGTCCTGTCCATCCTCATGACGTGCTGTGGAACGG
TAAGGGACCCTCCCCCCTCCCTCCCTCTCTTTCTTCCTACCTCTTATTTC
CATAGTACAGCTGCTGATTCTTTTTTTTGTTCTTCTCCCTCTATTCCTCC
CTTCCTCCCTTCCTCCCTCCCTCTCACAGGACAACCAGCTCCACATCTGG
GCCGAAGCCCGCGCCCTTGCCCCTTCCTCCCTCCCTCCCTCCTTCTCCTC
CAGCACGGATTCTCCCGCCTCCTCTCCCCGGAACACGACGGCTGCCTCCT
CCTCCTCCCTCCTACCTACGACCTTTCATCTCTGGCTGTCTATCCCATCA
TTCGCGCCATTGGGGTCGGCCGTGACGTGGCTCCGGTGGGCCAATTTTGG
GAGCACGCGGGCGTCGCAGGTAAGGGAGGGAGGGAGGGAGGGAGGGAAGG
AGGAAGGGAGGGCAGGCAGTCGATCGTTGGATTCTGTTTTCATTGCTCAT
TTATACGTCGGCTTTCTCTCCGCGATTTTCTCCGAAGCACCTCGCTGCCC
GTGTCCGGCAACACGGCCTCGATGACGGCAATAGAGGCGCACTGCTCCTC
AAGACAGTGGCAGGTTGGTCCTCCCTCCCTCCTTCCCTCCCTTCCTCCTT
CGCGTTTCTCCCTCCCTCCCCCCTTCCCTCCCTTTCGTCCCTCCCGCCCT
TCCCATTTCAGTTCCCCTTCTTTCATTTCTCACCTTTCACTCCATCCTTC
GCGTCAGACCGTCAGACCCGTCACTGTCCATGGCTCCCTCCTCTTCCACT
TTTCCTCCTTATCCTGGGCCTTTCCTCTTTCGTGTATGACTAATCGCCCC
ATCCTTCGCGTCAGACCCGTCAATGTCCATAACTTACTCCCTTTCTTATC
CTGGGCAGGGTCGCCGTTTCGTCGTTCGAGGACGGTTCTCCGATTCAGTC
TATTTTCAAACACTCTCACTCCACCCTCCATCCCTCCCTCCCTCCCTCCC
TCAGGCTCTTGGATTGTGGGAATGGAGGCGACAGGCACGATTAGAATTTG
GTGCATCGTGCACCCGCAGGATTCACAGCCCGGTGACCCTAAGCTGAAGG
AACATGTGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGCGGGAGGGA
GGGAAGGGGAAAGCGCCGCATATGGACGTCATCAGATGCACCACTCACCC
TTCCCCTTCCTCCTCCCGCTCTCCCTCCCTCCTTCTCTCCCTCCCTCCCT
CCCTCCCTTGCCTCCTCTCCTTCTTCCTTTTTCAGGCCAGGGTAGTTGAA
GTTGCAGCCCGCGCCTCCTGGCCCAGCTGGACCGCTTCCTCCTTCGGCCC
CTCTCTCTTCAAGGACACTCTCCCTCCCGCCCTCCCTCCCCATGCCATCA
CCCCAGTGAAGGGCAGCACGGCCGTGGTCAACAGAGATGATCCTGTCACT
CCTCTTACCACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCATCTGC
CAGGAAGGCGGCGCCTGCCACCCCCCTCGCCCTCCTCGGCCTGGGGCCGC
GTGTAAGCGCCACGGGCTTCTTTGACCCCCGGGGGGTAGGCGTCCCGGCT
GAGATCGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGAG
AGGGTAGTTTGGAAGGAAGAAGAATACCACTGTTTTTGATGCGCTATTAT
CTCACCATTCATGCCCCCCTCTCCTCCCTCCTTTCCTCCCTCCTTCCCTC
TAGGCATGGTCCTCAAGCCCGACTTCCTCGCTCCCTGCCCCTCCCCCTCC
TCCTCCTCCTCCCCCTCCTCCTCCCTTCCCACGGCCGCGCAGCTTCACCG
TGACTCCCGTCGGCTTCTCCTCACCACCCTCGGCACGTCCCTGGCCCATA
ATGGAGGTCTTCATGTCCATTGCCTCTCAGGCACCGTTCTCGATGCCGCG
CTGGTAGTTCGAGAGGTATTTACCCCCTCCCTCCCTCCTTCCCTCCTTCC
CTCCTTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTTCTTTCCCTCAT
TCTATCCCGTATTGTCTCCCTCCGTTTTCCCTCCCTCCTTCCCTCCTCCT
CACCTCCCTTTCTGACTCCACCCACCCTTCCGCGCCTCTATTACTTCCCT
TCACTCGATCTACGACAGGGTTCCTCCGCCTCCTCCCTCCTCCCTTCCTC
CTCTCCCTCCTCCTCTTCCTGCAGGACAAGCCTCCCCCCCACCTCCACCT
CCCTTCACCCTTTCTCCTCCTTCTCCCCTCCCCTCTTCCACCCCTCCCTC
CCTTTCCTTGTCCGCAAGGCTCCCAATTTCAATGGCGGCCCCGGCGACCC
GCCTGTCCTGAACACTGCCTTCCTCCCCCACCTCGCCCCTCCACTCTACA
CTCTCCCCTCCCTCCCTCAGCCCCTCCCCCTCCCCCTCCCCTCCATCGTT
CTTCCCCGCGGGAAAACGCCGGAACACGTCTTGTGGGTGGTCCATGCCGG
CACCCCGCCCTCCCTCCCGCCCTCCCTCCCACCCTCCCTCTTGGTGTTGG
ACACGACGCGAGGCCTTTATCTCTACACGGCCCAGCGGGCGAGATCCAAG
CTCCCTGTCCCTTCCCTTTTCCCACCCTGCTGGTCTGTCGAAGAAGATGG
AAGAGGGGAAGGGGAAGGAGGTGGAGGAGAAGCAGAAGGAGGGGAGGGAG
AGAGGGAGGGAGTGAGGGAGGGAGGGAAAACATGGATTTCGTTGAGTAGA
CCGGGATCGCCCACGAACATGACCGAGGTGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGGAGGGAAGAAGGGAGGGAACGAGGGAGGGAGGATGAAGG
GGAAGAAGAGCATGATGCAAACGACGATGAAGACACAACGACTGACGACT
CACCGCTGCCTCCGATCCCTCCCTCCCTTTTTCCCTTCCTCCCTCCCATC
CACGCCCCAACAGCGCCTCGTGTCCTTCCCGCCCTCCTCCCCCTCCTCCT
CCCTCTCCTCCTACACCGTGTCGCTCCTCCCCGATCCCATCTACGGCCTG
GGCATGCGTCTGGAGAAGAGAGAGGACTTTGTCCACGTGGCCTCTTTCAA
GCGACACCCTCAAACAAACGCCCTCCTCCCCGCGGAAGCGCACGCAGCCA
GGGAGAGGGAGGGAGGGCGGGAGGGTGGGATAGAGGTGGGCGATGCGCTG
GTGGGTGTCAATGGGTATTCCCTTGTGGGGATGGAGCTGGAGCAGGCCGT
AGGGGTGATGAGGAGTGTAGGGGCTGGGAAGGGAGGGAGGGGGGAGGAAT
GGGAGGCGTAG

Coding sequence (CDS) from alignment at chr15:936696..941606+

>NO15G03240.1 ID=NO15G03240.1|Name=NO15G03240.1|organism=Nannochloropsis oceanica|type=CDS|length=3042bp|location=Sequence derived from alignment at chr15:936696..941606+ (Nannochloropsis oceanica)
ATGACAACGACGGAGAGTACAACAATAAGCCGACGGCGGCTTCCGTGGGC
GCAATGCCATTTCCGAGGACAGGACTTGATATGCCTGGGTGTGGGCAACG
AAGCCCTCATTATTGACGGAGCGTCGCGCCTGGAACTTCAACGCGTGTCC
AATGGATGCGAGAGACGAAAGAAGCAGCAGCAGCAGCTACAGCAACAGCA
GCTGACAGCAGAGGAAGAAGAGGAGGTGGCCGGGGTCTTAGCAGAGGCGG
TGGCTGAGGGAGAAGAAGAGAGGGATGATGCCGTCGTGGGCGTGGCATGG
GGGGACGCGCGCGGCGTTTTGGCGGCGCTGTGGGAGAGCGGCACTCTGGC
TATTGCCGAGAACCCAACCGCGACGGGTGCATGGTCTGTGGTGAGCTGGT
TTCATATTCGTAACGCCGAGGAGGAGTACGAGAAGGAGGAGAAGGGTGGC
GACGGGGAAAGGCACGGGGCGGAGAAGGAGAAAGAGAAGGGAAAGAGGAA
GAAGAGGGGGCCGCTGATCCCACTGGACGCGTCGGTGACGTTGAGCTGGT
CCAGCCACGCGCTGCTTCTGGCTTGGGGTCGCTCTCTTCAGGTTTTTGCC
TTCTATGACTGGCACGAGCGGGCCATGAAGAGTGGTGGAGGGAGCGGGGG
AGGAGGAGGAGGAGGAGGAGGCAGGGGGGCGTTGCGGCGGCTGCTGCATT
ACCGTCTTCCTCTTCCTCATTTGACGGCAGACCTATGCCCGGATGGCAAT
TTTTTAGCTGTGTCCTACCTCGATGAGGAGCAGACGGATGTGCACGTCTG
GTCGGTACTCGCTTCCTCCTCCACCTCCTCCTCCTCATCTGCCTCCTCCT
CCTCCTCCTCCTCCTCTTCATCCTCCTCCTCCTCCACGCCAGCGTCTTCC
TCTTCCACCTTGCCAGCAGACCCCCCTTCCTCCCGCTCCGCCTCCATGGA
CGGGACATCTCACCCAAGCCCCGCCACTGCAGCCACGGCCAATAGCAGCA
GCATCAGCAGCAGCATCACCGACCCCCCCCCGCCTCCCATTGCGACGTTA
GGCCACCGGTCTCCTGCGCATGTGGTTGAATGGCGGTCGGGCTTGCCTGG
GGTCCTGTCCATCCTCATGACGTGCTGTGGAACGGACAACCAGCTCCACA
TCTGGGCCGAAGCCCGCGCCCTTGCCCCTTCCTCCCTCCCTCCCTCCTTC
TCCTCCAGCACGGATTCTCCCGCCTCCTCTCCCCGGAACACGACGGCTGC
CTCCTCCTCCTCCCTCCTACCTACGACCTTTCATCTCTGGCTGTCTATCC
CATCATTCGCGCCATTGGGGTCGGCCGTGACGTGGCTCCGGTGGGCCAAT
TTTGGGAGCACGCGGGCGTCGCAGCACCTCGCTGCCCGTGTCCGGCAACA
CGGCCTCGATGACGGCAATAGAGGCGCACTGCTCCTCAAGACAGTGGCAG
GCTCTTGGATTGTGGGAATGGAGGCGACAGGCACGATTAGAATTTGGTGC
ATCGTGCACCCGCAGGATTCACAGCCCGGTGACCCTAAGCTGAAGGAACA
TGCCAGGGTAGTTGAAGTTGCAGCCCGCGCCTCCTGGCCCAGCTGGACCG
CTTCCTCCTTCGGCCCCTCTCTCTTCAAGGACACTCTCCCTCCCGCCCTC
CCTCCCCATGCCATCACCCCAGTGAAGGGCAGCACGGCCGTGGTCAACAG
AGATGATCCTGTCACTCCTCTTACCACTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCATCTGCCAGGAAGGCGGCGCCTGCCACCCCCCTCGCCCTC
CTCGGCCTGGGGCCGCGTGTAAGCGCCACGGGCTTCTTTGACCCCCGGGG
GGTAGGCGTCCCGGCTGAGATCGGCATGGTCCTCAAGCCCGACTTCCTCG
CTCCCTGCCCCTCCCCCTCCTCCTCCTCCTCCCCCTCCTCCTCCCTTCCC
ACGGCCGCGCAGCTTCACCGTGACTCCCGTCGGCTTCTCCTCACCACCCT
CGGCACGTCCCTGGCCCATAATGGAGGTCTTCATGTCCATTGCCTCTCAG
GCACCGTTCTCGATGCCGCGCTGGTAGTTCGAGAGGGTTCCTCCGCCTCC
TCCCTCCTCCCTTCCTCCTCTCCCTCCTCCTCTTCCTGCAGGACAAGCCT
CCCCCCCACCTCCACCTCCCTTCACCCTTTCTCCTCCTTCTCCCCTCCCC
TCTTCCACCCCTCCCTCCCTTTCCTTGTCCGCAAGGCTCCCAATTTCAAT
GGCGGCCCCGGCGACCCGCCTGTCCTGAACACTGCCTTCCTCCCCCACCT
CGCCCCTCCACTCTACACTCTCCCCTCCCTCCCTCAGCCCCTCCCCCTCC
CCCTCCCCTCCATCGTTCTTCCCCGCGGGAAAACGCCGGAACACGTCTTG
TGGGTGGTCCATGCCGGCACCCCGCCCTCCCTCCCGCCCTCCCTCCCACC
CTCCCTCTTGGTGTTGGACACGACGCGAGGCCTTTATCTCTACACGGCCC
AGCGGGCGAGATCCAAGCTCCCTGTCCCTTCCCTTTTCCCACCCTGCTGG
TCTGTCGAAGAAGATGGAAGAGGGGAAGGGGAAGGAGGTGGAGGAGAAGC
AGAAGGAGGGGAGGGAGAGAGGGAGGGAGTGAGGGAGGGAGGGAAAACAT
GGATTTCGTTGAGTAGACCGGGATCGCCCACGAACATGACCGAGCGCCTC
GTGTCCTTCCCGCCCTCCTCCCCCTCCTCCTCCCTCTCCTCCTACACCGT
GTCGCTCCTCCCCGATCCCATCTACGGCCTGGGCATGCGTCTGGAGAAGA
GAGAGGACTTTGTCCACGTGGCCTCTTTCAAGCGACACCCTCAAACAAAC
GCCCTCCTCCCCGCGGAAGCGCACGCAGCCAGGGAGAGGGAGGGAGGGCG
GGAGGGTGGGATAGAGGTGGGCGATGCGCTGGTGGGTGTCAATGGGTATT
CCCTTGTGGGGATGGAGCTGGAGCAGGCCGTAGGGGTGATGAGGAGTGTA
GGGGCTGGGAAGGGAGGGAGGGGGGAGGAATGGGAGGCGTAG

Synonyms

Publications