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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr15 | genome | chr15:346757..349381 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO15G01230.1 vs.
Match: EWM22426.1 (hypothetical protein Naga_100011g44 [Nannochloropsis gaditana]) HSP 1 Score: 459.5 bits (1181), Expect = 2.100e-125 Identity = 282/478 (59.00%), Postives = 332/478 (69.46%), Query Frame = 0
Query: 347 ISARALDLLNPRGTLPALAVTYDKEQVDILLLVSLVEPLLETPGGHELASHRWRALETRRLARLKVGHLASEALPRLILDPERHVHGTLYVVREQVVLRLVLPWIRRIEELGEGGDDVTSFRNGGRLGRRLPGKTRMVEVHRIGTGRAGGGGIKASAGICMVYNASVGSLLIVRRRDAEVEMLNLAILPFMVDEEEEGEEEEQGWEQ--EGAADRRSSTQQQGRSMASKDGRFSNFVSFETACLPDMERLRRGYDRFLQAVACPSGSDLAQLKQDLIQEVVIPLRALQTRMVVRADEVAVLFERAHAAAKALDNHLVELRAAYGRLQTRVADAENQLEKDELVAQMAAEQLHWVRTVITPQENRKFQEVRLAEARLRNLDERLGAVEEWARVQAKEEEDAGGRGVEGG------GNNRRAIEREFEEARRRLTREVEELIKDVAHMEGALSLDEGYFLGEQGGGRAPLLGELETLRIN 817
+ RALDLLNP GTLPALAVT+DKE VD+LL VSLVEP L G E WRALE RRLARL GH A E LPRL+ DPERH G LY+VREQ VLRLVLPWIRR+EELG+ G ++ +G R P + R+ EVHRIG+G GG + S G CMVY ASVGSLL+VRRRDAEVEMLNLAILPFMVDEE + EE+ G EQ A+ R+ +GR RF NFV FE ACLPD+ERLRRGY+RFL AV ++L +LKQDLIQEVVIPLRALQTRMVVR+DEVAVL+ERAHA AK LD L E RAA RL RVA AE+QLE+DE VA++A E+LHWVR+VITPQE+R+FQEV+LAEARLRNL ERL +VE W GG+ +GG RRA E+E + RR L +V++L KDVA +E L +DE E G + LL + +LRI+
Sbjct: 1 MGVRALDLLNPCGTLPALAVTFDKELVDVLLAVSLVEPSLLR--GRE--GGPWRALEARRLARLMTGHRAREVLPRLLPDPERHSQGILYLVREQAVLRLVLPWIRRVEELGDEGGELGFSGSGALAEGRPPERARLQEVHRIGSGANAGG--RRSVGACMVYGASVGSLLLVRRRDAEVEMLNLAILPFMVDEEGDRPEEKDGDEQGRSVASARQELLSARGRETRE---RFFNFVPFEAACLPDLERLRRGYERFLHAVPGARTNELVRLKQDLIQEVVIPLRALQTRMVVRSDEVAVLYERAHAVAKVLDERLEEQRAACERLLERVAGAEHQLEQDEKVARLAVEKLHWVRSVITPQEDRRFQEVQLAEARLRNLHERLESVEGW----------LGGQKADGGDRTSICARRRRAPEQEMQ--RRHLISQVQDLGKDVALLESVLDMDEEDAPEEARVGGSALLHDFNSLRID 457
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO15G01230.1 ID=NO15G01230.1|Name=NO15G01230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2494bp
AGCATGACAGAGGCCACGCGTACGGCAATTTCGCGATTGGCCAAGGCATC
ATCCTTGGAAGGGTTGCCGGCCAAGGCTGGGGAGCCTCTGAATGTGTGTG
CCTACAGCGATGCCAAGCAACGCCTCTACTTCTTTGGCCAAGACGTGCAT
CAACGGGTGGAGACGCTGCACTACCTGACCCTCTCGGACCTTGGGCAGGG
CGTTGGGGCGGTGCGTATTGGTGGGGCGGCAGGGGAAGATCCCCGGGACC
GCTTCTATGGTGGGACGCGCGTTACCAACCTGTCTTTCAATAGCATGGGT
GACCGCCTTTTGCTCAGCGGGCCGCCCAGCGAGTCTTTCCCGTACTTGGG
CGTGGTGGACCTGCGCAACGACGACGATTCCACACCACTATCTTCATCTT
CTTCCTTTAAAAAGGTGGCCGTCCATGCCCCGCATCGCCAGCTCTTGCCA
TTGGAAATTCGAGGCCGATTGCTCAAGGCCGACTGGCACCCGCTCAGCAA
AACGCTCGTAGTTGCCTTGATTGGGCCGGAGCACGGACCCGAGAGCGGCC
AGGCAGCAGAACTCCGATTCTACGACTTGTCGCAAGAAGACGGGGCACGC
ATGCCTGAGCTGGTCATTCCCGTGGACGGCGACGTCGCTTCATTTTGCTT
TGGGCCCGAGTCGTTGTGGCAGCGCTTCACTATTTATTTACTGAGTGCGG
GCATGGAGGGGTCAGGGGCATCCCCGCGCCTGTCGGCACTCTGCCCTGTG
GTACCATACCGGGCACAGGTTCCTGCAATGGCTGTAAAAGAGCTGCAGGA
GGCGGTCCTGGAAGAGCTGGCGTTGGACAAGGTCTCCAGACGGAGGGAGG
AATTGGAGTCGCAGTGGGCTTTCCTAGTGCGCTGCTTCGGAGACGTGGTG
GAGTTGGCAAAAGAGCGCGGTGAAGAGTTTCTGGCCTTTCGGTGGGTAAC
GAGCCGCTTGGCCACGGCCTCGGACCGCATGCCGGTGCTTCAGGAGGTGG
AATACCCCAACCCGCCCGTCACGACCGCAGGAGGCGCCAGCATTTCCGCT
CGGGCTCTGGACTTGCTGAACCCGCGCGGGACCTTGCCGGCGCTGGCCGT
GACGTACGACAAGGAGCAGGTGGATATCTTGTTGCTTGTCTCGCTCGTGG
AGCCTTTGCTTGAGACCCCCGGCGGTCATGAGCTGGCCTCGCACCGGTGG
CGGGCACTGGAGACGCGGCGACTGGCACGCCTCAAGGTGGGCCACCTCGC
CAGCGAGGCGTTGCCGCGGCTGATCCTGGACCCGGAGCGGCATGTGCACG
GCACTCTGTACGTGGTGCGGGAACAGGTGGTGCTTCGCCTTGTCCTACCG
TGGATCAGGCGTATCGAGGAGCTGGGCGAGGGCGGGGACGATGTGACTTC
CTTTAGGAACGGGGGCCGACTGGGACGACGGCTGCCAGGGAAGACGCGCA
TGGTGGAGGTGCACCGGATTGGGACAGGGCGAGCAGGAGGAGGAGGTATT
AAAGCAAGCGCGGGAATCTGTATGGTGTACAACGCTTCAGTGGGAAGTTT
ACTTATCGTACGGCGACGCGATGCGGAGGTAGAGATGTTGAACTTAGCCA
TCCTGCCCTTTATGGTAGACGAGGAGGAGGAAGGAGAGGAGGAAGAACAA
GGGTGGGAACAGGAAGGGGCTGCTGATCGGAGGAGCTCGACGCAGCAACA
GGGCAGGAGCATGGCGAGCAAGGACGGGCGTTTTTCCAACTTTGTATCCT
TTGAGACGGCCTGTCTGCCGGACATGGAGCGGCTGCGACGGGGCTACGAC
CGCTTCTTGCAGGCGGTAGCGTGTCCAAGCGGAAGCGACCTGGCTCAGCT
GAAGCAGGATCTGATCCAGGAGGTGGTGATTCCCCTTCGGGCGCTGCAAA
CGCGCATGGTGGTTCGGGCGGACGAGGTGGCAGTGCTGTTTGAGCGAGCG
CACGCGGCGGCGAAGGCGCTGGACAACCATCTGGTGGAGCTGCGGGCCGC
ATACGGGCGGCTGCAGACCCGTGTCGCGGACGCTGAAAATCAATTGGAGA
AAGATGAGCTAGTGGCTCAGATGGCGGCCGAGCAGCTGCATTGGGTACGG
ACTGTCATCACGCCGCAGGAGAACCGCAAGTTCCAGGAAGTACGGCTTGC
TGAGGCCCGGCTGCGGAACTTGGACGAGCGCCTGGGGGCTGTCGAGGAGT
GGGCTCGCGTCCAGGCCAAAGAGGAGGAGGACGCTGGAGGTAGGGGGGTG
GAGGGCGGGGGAAATAACAGGCGCGCCATAGAACGGGAGTTCGAGGAGGC
GCGTCGACGGTTGACGCGGGAAGTGGAGGAGCTGATAAAAGACGTAGCAC
ATATGGAAGGTGCCCTGAGCCTAGACGAGGGGTATTTTTTGGGAGAGCAA
GGTGGTGGAAGGGCGCCTTTGCTGGGAGAGCTTGAGACTTTGCGCATCAA
TTGAACGTAAATCTAAATGTGAACGAAACAGATGGCGAGATAGA back to topprotein sequence of NO15G01230.1 >NO15G01230.1-protein ID=NO15G01230.1-protein|Name=NO15G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=817bp
MTEATRTAISRLAKASSLEGLPAKAGEPLNVCAYSDAKQRLYFFGQDVHQ
RVETLHYLTLSDLGQGVGAVRIGGAAGEDPRDRFYGGTRVTNLSFNSMGD
RLLLSGPPSESFPYLGVVDLRNDDDSTPLSSSSSFKKVAVHAPHRQLLPL
EIRGRLLKADWHPLSKTLVVALIGPEHGPESGQAAELRFYDLSQEDGARM
PELVIPVDGDVASFCFGPESLWQRFTIYLLSAGMEGSGASPRLSALCPVV
PYRAQVPAMAVKELQEAVLEELALDKVSRRREELESQWAFLVRCFGDVVE
LAKERGEEFLAFRWVTSRLATASDRMPVLQEVEYPNPPVTTAGGASISAR
ALDLLNPRGTLPALAVTYDKEQVDILLLVSLVEPLLETPGGHELASHRWR
ALETRRLARLKVGHLASEALPRLILDPERHVHGTLYVVREQVVLRLVLPW
IRRIEELGEGGDDVTSFRNGGRLGRRLPGKTRMVEVHRIGTGRAGGGGIK
ASAGICMVYNASVGSLLIVRRRDAEVEMLNLAILPFMVDEEEEGEEEEQG
WEQEGAADRRSSTQQQGRSMASKDGRFSNFVSFETACLPDMERLRRGYDR
FLQAVACPSGSDLAQLKQDLIQEVVIPLRALQTRMVVRADEVAVLFERAH
AAAKALDNHLVELRAAYGRLQTRVADAENQLEKDELVAQMAAEQLHWVRT
VITPQENRKFQEVRLAEARLRNLDERLGAVEEWARVQAKEEEDAGGRGVE
GGGNNRRAIEREFEEARRRLTREVEELIKDVAHMEGALSLDEGYFLGEQG
GGRAPLLGELETLRIN* back to topmRNA from alignment at chr15:346757..349381- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO15G01230.1 ID=NO15G01230.1|Name=NO15G01230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2625bp|location=Sequence derived from alignment at chr15:346757..349381- (Nannochloropsis oceanica)
AGCATGACAGAGGCCACGCGTACGGCAATTTCGCGATTGGCCAAGGCATC
ATCCTTGGAAGGGTTGCCGGCCAAGGCTGGGGAGCCTCTGAATGTGTGTG
CCTACAGCGATGCCAAGCAACGCCTCTACTTCTTTGGCCAAGACGTGCAT
CAACGGGTGGAGACGCTGCACTACCTGACCCTCTCGGACCTTGGGCAGGG
CGTTGGGGCGGTGCGTATTGGTGGGGCGGCAGGGGAAGATCCCCGGGACC
GCTTCTATGGTGGGACGCGCGTTACCAACCTGTCTTTCAATAGCATGGGT
GACCGCCTTTTGCTCAGCGGGCCGCCCAGCGAGTCTTTCCCGTACTTGGG
CGTGGTGGACCTGCGCAACGACGACGATTCCACACCACTATCTTCATCTT
CTTCCTTTAAAAAGGTGGCCGTCCATGCCCCGCATCGCCAGCTCTTGCCA
TTGGAAATTCGAGGCCGATTGCTCAAGGCCGACTGGCACCCGCTCAGCAA
AACGCTCGTAGTTGCCTTGATTGGGCCGGAGCACGGACCCGAGAGCGGCC
AGGCAGCAGAACTCCGATTCTACGACTTGTCGCAAGAAGACGGGGCACGC
ATGCCTGAGCTGGTCATTCCCGTGGACGGCGACGTCGCTTCATTTTGCTT
TGGGCCCGAGTCGTTGTGGCAGCGCTTCACTATTTATTTACTGAGTGCGG
GCATGGAGGGGTCAGGGGCATCCCCGCGCCTGTCGGCACTCTGCCCTGTG
GTACCATACCGGGCACAGGTTCCTGCAATGGCTGTAAAAGAGCTGCAGGA
GGCGGTCCTGGAAGAGCTGGCGTTGGACAAGGTCTCCAGACGGAGGGAGG
AATTGGAGTCGCAGTGGGCTTTCCTAGTGCGCTGCTTCGGAGACGTGGTG
GAGTTGGCAAAAGAGCGCGGTGAAGAGTTTCTGGCCTTTCGGTGGGTAAC
GAGCCGCTTGGCCACGGCCTCGGACCGCATGCCGGTGCTTCAGGAGGTGG
AATGTACGTATTTCAACTCAGGGACAGAGACAGACCACAGGGCTGGGGTA
TTTAGACAATGAAGCGAAATGAAGATACTCAGTCCCTCCTTTCATTCATT
TACCCATTCCTCCCCTTTCTTTTCCCTCTTTCAGACCCCAACCCGCCCGT
CACGACCGCAGGAGGCGCCAGCATTTCCGCTCGGGCTCTGGACTTGCTGA
ACCCGCGCGGGACCTTGCCGGCGCTGGCCGTGACGTACGACAAGGAGCAG
GTGGATATCTTGTTGCTTGTCTCGCTCGTGGAGCCTTTGCTTGAGACCCC
CGGCGGTCATGAGCTGGCCTCGCACCGGTGGCGGGCACTGGAGACGCGGC
GACTGGCACGCCTCAAGGTGGGCCACCTCGCCAGCGAGGCGTTGCCGCGG
CTGATCCTGGACCCGGAGCGGCATGTGCACGGCACTCTGTACGTGGTGCG
GGAACAGGTGGTGCTTCGCCTTGTCCTACCGTGGATCAGGCGTATCGAGG
AGCTGGGCGAGGGCGGGGACGATGTGACTTCCTTTAGGAACGGGGGCCGA
CTGGGACGACGGCTGCCAGGGAAGACGCGCATGGTGGAGGTGCACCGGAT
TGGGACAGGGCGAGCAGGAGGAGGAGGTATTAAAGCAAGCGCGGGAATCT
GTATGGTGTACAACGCTTCAGTGGGAAGTTTACTTATCGTACGGCGACGC
GATGCGGAGGTAGAGATGTTGAACTTAGCCATCCTGCCCTTTATGGTAGA
CGAGGAGGAGGAAGGAGAGGAGGAAGAACAAGGGTGGGAACAGGAAGGGG
CTGCTGATCGGAGGAGCTCGACGCAGCAACAGGGCAGGAGCATGGCGAGC
AAGGACGGGCGTTTTTCCAACTTTGTATCCTTTGAGACGGCCTGTCTGCC
GGACATGGAGCGGCTGCGACGGGGCTACGACCGCTTCTTGCAGGCGGTAG
CGTGTCCAAGCGGAAGCGACCTGGCTCAGCTGAAGCAGGATCTGATCCAG
GAGGTGGTGATTCCCCTTCGGGCGCTGCAAACGCGCATGGTGGTTCGGGC
GGACGAGGTGGCAGTGCTGTTTGAGCGAGCGCACGCGGCGGCGAAGGCGC
TGGACAACCATCTGGTGGAGCTGCGGGCCGCATACGGGCGGCTGCAGACC
CGTGTCGCGGACGCTGAAAATCAATTGGAGAAAGATGAGCTAGTGGCTCA
GATGGCGGCCGAGCAGCTGCATTGGGTACGGACTGTCATCACGCCGCAGG
AGAACCGCAAGTTCCAGGAAGTACGGCTTGCTGAGGCCCGGCTGCGGAAC
TTGGACGAGCGCCTGGGGGCTGTCGAGGAGTGGGCTCGCGTCCAGGCCAA
AGAGGAGGAGGACGCTGGAGGTAGGGGGGTGGAGGGCGGGGGAAATAACA
GGCGCGCCATAGAACGGGAGTTCGAGGAGGCGCGTCGACGGTTGACGCGG
GAAGTGGAGGAGCTGATAAAAGACGTAGCACATATGGAAGGTGCCCTGAG
CCTAGACGAGGGGTATTTTTTGGGAGAGCAAGGTGGTGGAAGGGCGCCTT
TGCTGGGAGAGCTTGAGACTTTGCGCATCAATTGAACGTAAATCTAAATG
TGAACGAAACAGATGGCGAGATAGA back to topCoding sequence (CDS) from alignment at chr15:346757..349381- >NO15G01230.1 ID=NO15G01230.1|Name=NO15G01230.1|organism=Nannochloropsis oceanica|type=CDS|length=2451bp|location=Sequence derived from alignment at chr15:346757..349381- (Nannochloropsis oceanica)
ATGACAGAGGCCACGCGTACGGCAATTTCGCGATTGGCCAAGGCATCATC
CTTGGAAGGGTTGCCGGCCAAGGCTGGGGAGCCTCTGAATGTGTGTGCCT
ACAGCGATGCCAAGCAACGCCTCTACTTCTTTGGCCAAGACGTGCATCAA
CGGGTGGAGACGCTGCACTACCTGACCCTCTCGGACCTTGGGCAGGGCGT
TGGGGCGGTGCGTATTGGTGGGGCGGCAGGGGAAGATCCCCGGGACCGCT
TCTATGGTGGGACGCGCGTTACCAACCTGTCTTTCAATAGCATGGGTGAC
CGCCTTTTGCTCAGCGGGCCGCCCAGCGAGTCTTTCCCGTACTTGGGCGT
GGTGGACCTGCGCAACGACGACGATTCCACACCACTATCTTCATCTTCTT
CCTTTAAAAAGGTGGCCGTCCATGCCCCGCATCGCCAGCTCTTGCCATTG
GAAATTCGAGGCCGATTGCTCAAGGCCGACTGGCACCCGCTCAGCAAAAC
GCTCGTAGTTGCCTTGATTGGGCCGGAGCACGGACCCGAGAGCGGCCAGG
CAGCAGAACTCCGATTCTACGACTTGTCGCAAGAAGACGGGGCACGCATG
CCTGAGCTGGTCATTCCCGTGGACGGCGACGTCGCTTCATTTTGCTTTGG
GCCCGAGTCGTTGTGGCAGCGCTTCACTATTTATTTACTGAGTGCGGGCA
TGGAGGGGTCAGGGGCATCCCCGCGCCTGTCGGCACTCTGCCCTGTGGTA
CCATACCGGGCACAGGTTCCTGCAATGGCTGTAAAAGAGCTGCAGGAGGC
GGTCCTGGAAGAGCTGGCGTTGGACAAGGTCTCCAGACGGAGGGAGGAAT
TGGAGTCGCAGTGGGCTTTCCTAGTGCGCTGCTTCGGAGACGTGGTGGAG
TTGGCAAAAGAGCGCGGTGAAGAGTTTCTGGCCTTTCGGTGGGTAACGAG
CCGCTTGGCCACGGCCTCGGACCGCATGCCGGTGCTTCAGGAGGTGGAAT
ACCCCAACCCGCCCGTCACGACCGCAGGAGGCGCCAGCATTTCCGCTCGG
GCTCTGGACTTGCTGAACCCGCGCGGGACCTTGCCGGCGCTGGCCGTGAC
GTACGACAAGGAGCAGGTGGATATCTTGTTGCTTGTCTCGCTCGTGGAGC
CTTTGCTTGAGACCCCCGGCGGTCATGAGCTGGCCTCGCACCGGTGGCGG
GCACTGGAGACGCGGCGACTGGCACGCCTCAAGGTGGGCCACCTCGCCAG
CGAGGCGTTGCCGCGGCTGATCCTGGACCCGGAGCGGCATGTGCACGGCA
CTCTGTACGTGGTGCGGGAACAGGTGGTGCTTCGCCTTGTCCTACCGTGG
ATCAGGCGTATCGAGGAGCTGGGCGAGGGCGGGGACGATGTGACTTCCTT
TAGGAACGGGGGCCGACTGGGACGACGGCTGCCAGGGAAGACGCGCATGG
TGGAGGTGCACCGGATTGGGACAGGGCGAGCAGGAGGAGGAGGTATTAAA
GCAAGCGCGGGAATCTGTATGGTGTACAACGCTTCAGTGGGAAGTTTACT
TATCGTACGGCGACGCGATGCGGAGGTAGAGATGTTGAACTTAGCCATCC
TGCCCTTTATGGTAGACGAGGAGGAGGAAGGAGAGGAGGAAGAACAAGGG
TGGGAACAGGAAGGGGCTGCTGATCGGAGGAGCTCGACGCAGCAACAGGG
CAGGAGCATGGCGAGCAAGGACGGGCGTTTTTCCAACTTTGTATCCTTTG
AGACGGCCTGTCTGCCGGACATGGAGCGGCTGCGACGGGGCTACGACCGC
TTCTTGCAGGCGGTAGCGTGTCCAAGCGGAAGCGACCTGGCTCAGCTGAA
GCAGGATCTGATCCAGGAGGTGGTGATTCCCCTTCGGGCGCTGCAAACGC
GCATGGTGGTTCGGGCGGACGAGGTGGCAGTGCTGTTTGAGCGAGCGCAC
GCGGCGGCGAAGGCGCTGGACAACCATCTGGTGGAGCTGCGGGCCGCATA
CGGGCGGCTGCAGACCCGTGTCGCGGACGCTGAAAATCAATTGGAGAAAG
ATGAGCTAGTGGCTCAGATGGCGGCCGAGCAGCTGCATTGGGTACGGACT
GTCATCACGCCGCAGGAGAACCGCAAGTTCCAGGAAGTACGGCTTGCTGA
GGCCCGGCTGCGGAACTTGGACGAGCGCCTGGGGGCTGTCGAGGAGTGGG
CTCGCGTCCAGGCCAAAGAGGAGGAGGACGCTGGAGGTAGGGGGGTGGAG
GGCGGGGGAAATAACAGGCGCGCCATAGAACGGGAGTTCGAGGAGGCGCG
TCGACGGTTGACGCGGGAAGTGGAGGAGCTGATAAAAGACGTAGCACATA
TGGAAGGTGCCCTGAGCCTAGACGAGGGGTATTTTTTGGGAGAGCAAGGT
GGTGGAAGGGCGCCTTTGCTGGGAGAGCTTGAGACTTTGCGCATCAATTG
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