NO12G00520.1, NO12G00520.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G00520.1
Unique Name	NO12G00520.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2649
Alignment location	chr12:192229..195580 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:192229..195580 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO12G00520.1 vs.
Match: EWM25958.1 (Winged helix-turn-helix transcription repressor [Nannochloropsis gaditana])

HSP 1 Score: 399.1 bits (1024), Expect = 3.700e-107
Identity = 393/920 (42.72%), Postives = 478/920 (51.96%), Query Frame = 0

Query:    1 MEPYQRTISSSSSGSKKSPHSGTSSQSTCFVQKLFTMVAVEDAAILSFTADGKSFEVKNPKRLENEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHDCFQRGQPQLLEMLKRKTSNAHHPHHPFNLQNTISSSLSGGGGQGGGGRGIKGEGIRLDEHAVNMTLAKLKHKGGGGAGGR----GRRSPSPSYFTSHPNHHEQQQQQQQQQQQYPYSHHHNHGPAPFGHSLPPPPLTPSFQHHPARQCQPMDLPPYQEGGGRE-------GGFAPPTSAAAALPRNDSGATFSSTSTSDDSSCSVGAPAFPPPLLPAGTSPSSHHRNQQQQQQQQQQQQQQHYYQQQYAWQEG----GAIPSSSSPPFSLSPLARASSLEWGNSGAASNITTSSSRSNSTSFKHGQHYHNYQVQHRQCLQDQLQ-----QQQQQSHHPSLRSIIGSEGGRMTLMATLSDAGSARRNHTTNQSSSSTS-SSSGHNTTRENSMDDSLYSGEGKEEGGEGGGRG-----ITRPHPPRPLYYVSAEGQAPGSEGEGGSTSPSPATSCAVGGVGPLRMSPPSALCSWSRSLPEG--GREG---GRVKFEGAPGQ---PPQLLSALLLSREKSSTKTGGIPISPPPSIPTSLAPSSSPSSFPAGTPNHWAPGTKVMASSSTPASLPSSFSSSSMLMRKPHQLHLQHQMQPQTQLQQGRRERGRVAELPHASRMTPPSQRLY----NRRMPSSSEDEEAMEVGAEGESESSVVSSLSSDDDYGGEDEEEEEEQEQQQQQQLQQQQRRQQLQRQKQLLQQERRRRAQHHYHHHHHHHHHTLKTGGGVGGGKLGGKVGGAGMVSKRQQQIQQQQQQMELQQEWRKQQQLLQQQDVGVDEEEAAMQMASFKLGRFWGGGREGGGEGRAAVVKTVEV 883
            MEPY R   ++ + SKK+    +SSQSTCFV+KLFTMVAVED +ILSFT DGKSFEVKNPKRLE+E+LPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRH+CFQRG+PQLL+MLKRKTSNAHHPHHP+N+Q+T+    +G G  GG G    G+G+  +EHA  M LAK+  K  G  GGR    GRRS     FT  P                P S      PAP    LPP P     QHHP  QCQPMDLP    GG RE       G   P     A+LPRN SG TFSSTSTSD+S  S  A   PPP          HH    Q     Q Q Q     Q Y W +G       P  + PP SL P               S   ++ SR   +  + G        Q  QC     Q      Q+ ++H P          GR      LS AG A+            S + SG +TTRENS+DDS+ S   + EGG  GGRG     +  PHP RPLYYVSA       EGEGGST+P         G G +   P        R L +G  GREG      +F  A G+   PP LL A +       +K G   ++ PPS+P S+           GT NHWAPGT+V+ SS+ P+S PSS  SS        +    H      +  +G RE G + +LPHA R TP SQRLY      R     E+EE+     EG S+SS+VSSLSS+D++   D              L    R+    +Q+Q   +   RR +HH+HHHHHHHHH+    GG  GG+LG +    G+    + Q  +++ +    Q  R      + QDV VDEEEAAMQMASF+LGRFWGG   G GEG   + KT+EV
Sbjct:    1 MEPYNR---NTGAISKKASPPESSSQSTCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEILPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLDMLKRKTSNAHHPHHPYNIQHTMGGGRAGEGNGGGEG----GQGMPGNEHATKMALAKMTSKEAGRHGGRAPSGGRRSKPSPEFTYQPGFFS------------PLS------PAP----LPPSPYAHP-QHHPHMQCQPMDLPFQPHGGPREASPSAHGGPTLPLKHGHASLPRNASGDTFSSTSTSDES--SYAACGHPPP----------HH---PQHPTHSQPQPQHSPDLQSYGWAKGRLGMDGTPRCTLPP-SLPP-------------PPSTPYSTLSRPCPSPPEPGAR------QPPQCALPPSQGPHITYQRLETHVP--------PSGRPR---PLSSAGGAQGTEAYAPVPGPLSETGSGGHTTRENSLDDSVCSFH-RGEGGARGGRGPRSEHVHPPHPSRPLYYVSA-------EGEGGSTTPPSFPPSQARGQGKMSSLP--------RFLDQGVAGREGRGPSSPQFTMAVGRTQGPPSLLDARV-------SKGGKQGVALPPSLPASV-----------GTYNHWAPGTRVVGSSTLPSSFPSSHPSSH--GADGSRALSSHPGAGLCKSHRGEREAGHLIQLPHAFRSTPASQRLYPPSPQHRGGRGKEEEESGGEEEEG-SQSSLVSSLSSEDEFDSGD--------------LCHDHRQGSCSQQQQAFLEHVGRRQRHHHHHHHHHHHHSHPRHGG-EGGRLGKRAAHYGLGPIPRPQEARRKPRSSHSQTARPAAP-EKPQDVSVDEEEAAMQMASFRLGRFWGGAMGGRGEG---LKKTLEV 788

The following BLAST results are available for this feature:

BLAST of NO12G00520.1 vs.

BLAST of NO12G00520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25958.1	3.700e-107	42.72	Winged helix-turn-helix transcription repressor [N...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO12G00520	NO12G00520	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00520.1	NO12G00520.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO12G00520.1.cds1	NO12G00520.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00520.1.cds2	NO12G00520.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO12G00520.1.cds3	NO12G00520.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr12:192229..195580-
coding sequence from alignment at chr12:192229..195580-

mRNA sequence

>NO12G00520.1 ID=NO12G00520.1|Name=NO12G00520.1|organism=Nannochloropsis oceanica|type=mRNA|length=2649bp
ATGGAGCCTTATCAACGCACCATAAGCAGCAGCAGCAGCGGTAGCAAAAA
ATCACCCCACTCTGGTACCTCTTCGCAGTCCACCTGCTTCGTCCAGAAAC
TCTTTACCATGGTAGCTGTCGAGGATGCCGCCATCCTTTCCTTCACGGCA
GACGGCAAGAGTTTCGAAGTCAAGAACCCGAAGCGCTTGGAAAATGAGGT
CCTCCCCCGCTACTACCGTCACGGGCACTTCACCTCCTTTGTTCGACAGC
TGAACTTCTACAACTTCAAGAAAGTCTCCAAAGAACGCAACATTTGGATC
TACCGTCATGACTGCTTCCAGCGCGGCCAGCCCCAGCTTCTGGAAATGCT
GAAGCGCAAGACCAGCAACGCCCACCATCCACATCACCCCTTCAACCTTC
AAAACACCATCTCGTCGTCTCTTTCCGGCGGAGGCGGGCAGGGCGGGGGG
GGGCGAGGAATCAAGGGAGAGGGGATACGCCTTGACGAGCACGCCGTTAA
CATGACACTGGCAAAGCTTAAGCACAAGGGAGGAGGGGGGGCTGGGGGAC
GAGGTCGACGTTCGCCTTCCCCTTCCTACTTTACTTCCCACCCTAACCAC
CACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTACAG
CCATCACCACAACCACGGCCCGGCTCCCTTCGGCCACTCCCTCCCTCCCC
CTCCCCTCACCCCATCCTTCCAGCACCACCCTGCGCGGCAGTGCCAGCCC
ATGGATCTGCCTCCCTACCAAGAAGGGGGGGGGAGGGAGGGAGGATTCGC
CCCTCCAACATCTGCAGCTGCTGCTCTTCCCCGCAACGACAGCGGGGCCA
CCTTTTCCTCCACGTCCACCTCCGACGACTCTTCGTGCTCAGTCGGCGCG
CCTGCCTTCCCTCCGCCCCTTCTTCCAGCCGGAACTTCACCCTCCTCCCA
CCACCGGAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCACTATTACCAGCAACAATATGCATGGCAAGAAGGAGGAGCCATCCCG
TCCTCTTCATCTCCTCCCTTCTCTCTGTCCCCCCTGGCACGTGCTTCTTC
CTTGGAGTGGGGCAACAGCGGCGCCGCCTCCAACATCACTACCAGCAGCA
GCAGGAGCAACAGCACGAGCTTTAAACACGGGCAGCATTACCACAATTAT
CAAGTACAACACCGACAGTGTCTCCAGGACCAGCTCCAGCAGCAGCAGCA
ACAGTCTCACCACCCTTCTCTTCGCTCAATCATTGGAAGCGAAGGAGGGC
GTATGACTCTTATGGCCACTCTTTCCGACGCTGGTAGCGCCAGGAGGAAC
CACACCACCAACCAAAGCAGCAGCAGCACCAGCAGTAGCAGTGGCCACAA
TACCACTCGCGAGAACAGCATGGACGATTCCCTCTACAGTGGTGAAGGGA
AGGAAGAAGGGGGGGAGGGAGGGGGGAGAGGGATTACCAGGCCACACCCT
CCACGGCCTCTGTATTACGTGTCGGCGGAGGGCCAGGCCCCCGGGTCGGA
GGGAGAGGGAGGGAGCACCTCTCCCTCTCCCGCGACTTCGTGTGCTGTAG
GTGGAGTGGGCCCGCTGAGAATGTCCCCTCCTTCCGCCCTTTGCTCGTGG
AGTCGCTCGCTGCCCGAGGGAGGGAGGGAAGGAGGGAGGGTGAAATTTGA
AGGTGCACCAGGTCAGCCTCCGCAGTTGTTGTCCGCACTGTTGTTGAGTC
GTGAAAAGTCCTCAACAAAAACGGGAGGCATTCCTATTTCTCCGCCTCCT
TCCATCCCTACCTCCCTCGCACCCTCCTCTTCTCCGTCCTCCTTTCCTGC
CGGGACGCCTAACCACTGGGCACCAGGCACCAAGGTGATGGCCTCCTCCT
CCACCCCTGCCTCCCTCCCGTCCTCCTTCTCCTCTTCCTCTATGCTGATG
AGGAAACCCCACCAGCTGCACTTGCAGCATCAGATGCAGCCTCAAACTCA
GTTGCAGCAGGGAAGGAGGGAGCGAGGGAGGGTGGCAGAGCTGCCTCATG
CCTCAAGGATGACTCCACCAAGTCAACGGTTGTACAATCGACGCATGCCT
TCCTCCTCCGAGGACGAGGAGGCGATGGAAGTAGGGGCCGAAGGGGAGAG
TGAGAGCAGTGTGGTTTCGAGCTTGTCGTCTGACGACGATTATGGCGGGG
AGGACGAGGAGGAGGAGGAGGAACAAGAGCAGCAGCAGCAGCAGCAGTTG
CAGCAGCAGCAGAGGCGGCAACAGCTGCAGAGGCAGAAGCAGCTGCTGCA
GCAGGAAAGGCGACGTCGAGCGCAGCACCACTACCACCACCATCATCATC
ACCATCATCACACTCTCAAGACGGGAGGGGGCGTGGGCGGAGGAAAATTG
GGAGGGAAGGTGGGAGGAGCGGGAATGGTCTCGAAGCGCCAGCAGCAGAT
TCAGCAGCAGCAACAGCAGATGGAGCTCCAACAGGAGTGGCGCAAGCAGC
AGCAGCTGCTGCAGCAGCAGGACGTGGGAGTAGACGAGGAGGAGGCGGCG
ATGCAGATGGCGAGTTTCAAACTGGGTCGATTTTGGGGGGGAGGGAGGGA
GGGAGGGGGGGAAGGGAGGGCGGCGGTGGTCAAAACGGTGGAGGTGTGA

protein sequence of NO12G00520.1

>NO12G00520.1-protein ID=NO12G00520.1-protein|Name=NO12G00520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=883bp
MEPYQRTISSSSSGSKKSPHSGTSSQSTCFVQKLFTMVAVEDAAILSFTA
DGKSFEVKNPKRLENEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWI
YRHDCFQRGQPQLLEMLKRKTSNAHHPHHPFNLQNTISSSLSGGGGQGGG
GRGIKGEGIRLDEHAVNMTLAKLKHKGGGGAGGRGRRSPSPSYFTSHPNH
HEQQQQQQQQQQQYPYSHHHNHGPAPFGHSLPPPPLTPSFQHHPARQCQP
MDLPPYQEGGGREGGFAPPTSAAAALPRNDSGATFSSTSTSDDSSCSVGA
PAFPPPLLPAGTSPSSHHRNQQQQQQQQQQQQQQHYYQQQYAWQEGGAIP
SSSSPPFSLSPLARASSLEWGNSGAASNITTSSSRSNSTSFKHGQHYHNY
QVQHRQCLQDQLQQQQQQSHHPSLRSIIGSEGGRMTLMATLSDAGSARRN
HTTNQSSSSTSSSSGHNTTRENSMDDSLYSGEGKEEGGEGGGRGITRPHP
PRPLYYVSAEGQAPGSEGEGGSTSPSPATSCAVGGVGPLRMSPPSALCSW
SRSLPEGGREGGRVKFEGAPGQPPQLLSALLLSREKSSTKTGGIPISPPP
SIPTSLAPSSSPSSFPAGTPNHWAPGTKVMASSSTPASLPSSFSSSSMLM
RKPHQLHLQHQMQPQTQLQQGRRERGRVAELPHASRMTPPSQRLYNRRMP
SSSEDEEAMEVGAEGESESSVVSSLSSDDDYGGEDEEEEEEQEQQQQQQL
QQQQRRQQLQRQKQLLQQERRRRAQHHYHHHHHHHHHTLKTGGGVGGGKL
GGKVGGAGMVSKRQQQIQQQQQQMELQQEWRKQQQLLQQQDVGVDEEEAA
MQMASFKLGRFWGGGREGGGEGRAAVVKTVEV*

mRNA from alignment at chr12:192229..195580-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO12G00520.1 ID=NO12G00520.1|Name=NO12G00520.1|organism=Nannochloropsis oceanica|type=mRNA|length=3352bp|location=Sequence derived from alignment at chr12:192229..195580- (Nannochloropsis oceanica)
ATGGAGCCTTATCAACGCACCATAAGCAGCAGCAGCAGCGGTAGCAAAAA
ATCACCCCACTCTGGTACCTCTTCGCAGTCCACCTGCTTCGTCCAGAAAC
TCTTTACCATGGTAGCTGTCGAGGATGCCGCCATCCTTTCCTTCACGGCA
GGTAAGACGCTCGAGATCTAACATGATGTTTCCAACTGCAATTTCCCTAC
CCGTAGTGTATTTCCTTCTTACTTCCTATCTGAGGGTATCCTTCTGGTGT
TTGAGCGTCGGGAGGGAGGGAGAAAGGGAAGGTGGCTGCTTTGCTTGTGT
TTTGGGATTCGAAGCGGTCTTGGTCTGTTGTCACTCTCCTCCTTTCCTCC
CGTTCCGTATGCCGACCCCCCCACCTTCATTTTTGCCTTGCATGATGGAG
ATGTTCCCTGAGATACACGCACATGTGCCTTGTGGATATTGTGATTATCC
TTCGTAATCCCCTGCACACGCACATCACATTCCTTCCATCATGCCTTCAC
CACTCTCTCCTTCCCTCCCTGTCAATCTCATTTCCCGGCCTAGCCCTGAA
GCGAAAGGGGGCAGCACACGCTCATCCCTCCCCCTCTTTCCCTCTCTCCC
CCCTCATCCTCATTTTCTCGTCCCAGACGGCAAGAGTTTCGAAGTCAAGA
ACCCGAAGCGCTTGGAAAATGAGGTCCTCCCCCGCTACTACCGTCACGGG
CACTTCACCTCCTTTGTTCGACAGCTGAACTTCTACAACTTCAAGGTATA
GAGCAAGGGAGGAAAGGAGGGACGGAGGGGCGGAGGGAGGGACGGAGGGA
TTGGTGATACACTGTCATGCCTGATTTGTTATGTCTCGATGTTCAAAAGA
AATATTTTGAACGGAAAATGAATCACAAGATTTGATTTTTCCATCCCTTG
GCACATTGGCGTTTCTCCATACTCCCTCTCTCCCTCCCTCCCTCCCTTCC
TTCCTTCCTTTCCCTCCTCGCAGAAAGTCTCCAAAGAACGCAACATTTGG
ATCTACCGTCATGACTGCTTCCAGCGCGGCCAGCCCCAGCTTCTGGAAAT
GCTGAAGCGCAAGACCAGCAACGCCCACCATCCACATCACCCCTTCAACC
TTCAAAACACCATCTCGTCGTCTCTTTCCGGCGGAGGCGGGCAGGGCGGG
GGGGGGCGAGGAATCAAGGGAGAGGGGATACGCCTTGACGAGCACGCCGT
TAACATGACACTGGCAAAGCTTAAGCACAAGGGAGGAGGGGGGGCTGGGG
GACGAGGTCGACGTTCGCCTTCCCCTTCCTACTTTACTTCCCACCCTAAC
CACCACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTA
CAGCCATCACCACAACCACGGCCCGGCTCCCTTCGGCCACTCCCTCCCTC
CCCCTCCCCTCACCCCATCCTTCCAGCACCACCCTGCGCGGCAGTGCCAG
CCCATGGATCTGCCTCCCTACCAAGAAGGGGGGGGGAGGGAGGGAGGATT
CGCCCCTCCAACATCTGCAGCTGCTGCTCTTCCCCGCAACGACAGCGGGG
CCACCTTTTCCTCCACGTCCACCTCCGACGACTCTTCGTGCTCAGTCGGC
GCGCCTGCCTTCCCTCCGCCCCTTCTTCCAGCCGGAACTTCACCCTCCTC
CCACCACCGGAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCACTATTACCAGCAACAATATGCATGGCAAGAAGGAGGAGCCATC
CCGTCCTCTTCATCTCCTCCCTTCTCTCTGTCCCCCCTGGCACGTGCTTC
TTCCTTGGAGTGGGGCAACAGCGGCGCCGCCTCCAACATCACTACCAGCA
GCAGCAGGAGCAACAGCACGAGCTTTAAACACGGGCAGCATTACCACAAT
TATCAAGTACAACACCGACAGTGTCTCCAGGACCAGCTCCAGCAGCAGCA
GCAACAGTCTCACCACCCTTCTCTTCGCTCAATCATTGGAAGCGAAGGAG
GGCGTATGACTCTTATGGCCACTCTTTCCGACGCTGGTAGCGCCAGGAGG
AACCACACCACCAACCAAAGCAGCAGCAGCACCAGCAGTAGCAGTGGCCA
CAATACCACTCGCGAGAACAGCATGGACGATTCCCTCTACAGTGGTGAAG
GGAAGGAAGAAGGGGGGGAGGGAGGGGGGAGAGGGATTACCAGGCCACAC
CCTCCACGGCCTCTGTATTACGTGTCGGCGGAGGGCCAGGCCCCCGGGTC
GGAGGGAGAGGGAGGGAGCACCTCTCCCTCTCCCGCGACTTCGTGTGCTG
TAGGTGGAGTGGGCCCGCTGAGAATGTCCCCTCCTTCCGCCCTTTGCTCG
TGGAGTCGCTCGCTGCCCGAGGGAGGGAGGGAAGGAGGGAGGGTGAAATT
TGAAGGTGCACCAGGTCAGCCTCCGCAGTTGTTGTCCGCACTGTTGTTGA
GTCGTGAAAAGTCCTCAACAAAAACGGGAGGCATTCCTATTTCTCCGCCT
CCTTCCATCCCTACCTCCCTCGCACCCTCCTCTTCTCCGTCCTCCTTTCC
TGCCGGGACGCCTAACCACTGGGCACCAGGCACCAAGGTGATGGCCTCCT
CCTCCACCCCTGCCTCCCTCCCGTCCTCCTTCTCCTCTTCCTCTATGCTG
ATGAGGAAACCCCACCAGCTGCACTTGCAGCATCAGATGCAGCCTCAAAC
TCAGTTGCAGCAGGGAAGGAGGGAGCGAGGGAGGGTGGCAGAGCTGCCTC
ATGCCTCAAGGATGACTCCACCAAGTCAACGGTTGTACAATCGACGCATG
CCTTCCTCCTCCGAGGACGAGGAGGCGATGGAAGTAGGGGCCGAAGGGGA
GAGTGAGAGCAGTGTGGTTTCGAGCTTGTCGTCTGACGACGATTATGGCG
GGGAGGACGAGGAGGAGGAGGAGGAACAAGAGCAGCAGCAGCAGCAGCAG
TTGCAGCAGCAGCAGAGGCGGCAACAGCTGCAGAGGCAGAAGCAGCTGCT
GCAGCAGGAAAGGCGACGTCGAGCGCAGCACCACTACCACCACCATCATC
ATCACCATCATCACACTCTCAAGACGGGAGGGGGCGTGGGCGGAGGAAAA
TTGGGAGGGAAGGTGGGAGGAGCGGGAATGGTCTCGAAGCGCCAGCAGCA
GATTCAGCAGCAGCAACAGCAGATGGAGCTCCAACAGGAGTGGCGCAAGC
AGCAGCAGCTGCTGCAGCAGCAGGACGTGGGAGTAGACGAGGAGGAGGCG
GCGATGCAGATGGCGAGTTTCAAACTGGGTCGATTTTGGGGGGGAGGGAG
GGAGGGAGGGGGGGAAGGGAGGGCGGCGGTGGTCAAAACGGTGGAGGTGT
GA

Coding sequence (CDS) from alignment at chr12:192229..195580-

>NO12G00520.1 ID=NO12G00520.1|Name=NO12G00520.1|organism=Nannochloropsis oceanica|type=CDS|length=2649bp|location=Sequence derived from alignment at chr12:192229..195580- (Nannochloropsis oceanica)
ATGGAGCCTTATCAACGCACCATAAGCAGCAGCAGCAGCGGTAGCAAAAA
ATCACCCCACTCTGGTACCTCTTCGCAGTCCACCTGCTTCGTCCAGAAAC
TCTTTACCATGGTAGCTGTCGAGGATGCCGCCATCCTTTCCTTCACGGCA
GACGGCAAGAGTTTCGAAGTCAAGAACCCGAAGCGCTTGGAAAATGAGGT
CCTCCCCCGCTACTACCGTCACGGGCACTTCACCTCCTTTGTTCGACAGC
TGAACTTCTACAACTTCAAGAAAGTCTCCAAAGAACGCAACATTTGGATC
TACCGTCATGACTGCTTCCAGCGCGGCCAGCCCCAGCTTCTGGAAATGCT
GAAGCGCAAGACCAGCAACGCCCACCATCCACATCACCCCTTCAACCTTC
AAAACACCATCTCGTCGTCTCTTTCCGGCGGAGGCGGGCAGGGCGGGGGG
GGGCGAGGAATCAAGGGAGAGGGGATACGCCTTGACGAGCACGCCGTTAA
CATGACACTGGCAAAGCTTAAGCACAAGGGAGGAGGGGGGGCTGGGGGAC
GAGGTCGACGTTCGCCTTCCCCTTCCTACTTTACTTCCCACCCTAACCAC
CACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTACAG
CCATCACCACAACCACGGCCCGGCTCCCTTCGGCCACTCCCTCCCTCCCC
CTCCCCTCACCCCATCCTTCCAGCACCACCCTGCGCGGCAGTGCCAGCCC
ATGGATCTGCCTCCCTACCAAGAAGGGGGGGGGAGGGAGGGAGGATTCGC
CCCTCCAACATCTGCAGCTGCTGCTCTTCCCCGCAACGACAGCGGGGCCA
CCTTTTCCTCCACGTCCACCTCCGACGACTCTTCGTGCTCAGTCGGCGCG
CCTGCCTTCCCTCCGCCCCTTCTTCCAGCCGGAACTTCACCCTCCTCCCA
CCACCGGAATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCACTATTACCAGCAACAATATGCATGGCAAGAAGGAGGAGCCATCCCG
TCCTCTTCATCTCCTCCCTTCTCTCTGTCCCCCCTGGCACGTGCTTCTTC
CTTGGAGTGGGGCAACAGCGGCGCCGCCTCCAACATCACTACCAGCAGCA
GCAGGAGCAACAGCACGAGCTTTAAACACGGGCAGCATTACCACAATTAT
CAAGTACAACACCGACAGTGTCTCCAGGACCAGCTCCAGCAGCAGCAGCA
ACAGTCTCACCACCCTTCTCTTCGCTCAATCATTGGAAGCGAAGGAGGGC
GTATGACTCTTATGGCCACTCTTTCCGACGCTGGTAGCGCCAGGAGGAAC
CACACCACCAACCAAAGCAGCAGCAGCACCAGCAGTAGCAGTGGCCACAA
TACCACTCGCGAGAACAGCATGGACGATTCCCTCTACAGTGGTGAAGGGA
AGGAAGAAGGGGGGGAGGGAGGGGGGAGAGGGATTACCAGGCCACACCCT
CCACGGCCTCTGTATTACGTGTCGGCGGAGGGCCAGGCCCCCGGGTCGGA
GGGAGAGGGAGGGAGCACCTCTCCCTCTCCCGCGACTTCGTGTGCTGTAG
GTGGAGTGGGCCCGCTGAGAATGTCCCCTCCTTCCGCCCTTTGCTCGTGG
AGTCGCTCGCTGCCCGAGGGAGGGAGGGAAGGAGGGAGGGTGAAATTTGA
AGGTGCACCAGGTCAGCCTCCGCAGTTGTTGTCCGCACTGTTGTTGAGTC
GTGAAAAGTCCTCAACAAAAACGGGAGGCATTCCTATTTCTCCGCCTCCT
TCCATCCCTACCTCCCTCGCACCCTCCTCTTCTCCGTCCTCCTTTCCTGC
CGGGACGCCTAACCACTGGGCACCAGGCACCAAGGTGATGGCCTCCTCCT
CCACCCCTGCCTCCCTCCCGTCCTCCTTCTCCTCTTCCTCTATGCTGATG
AGGAAACCCCACCAGCTGCACTTGCAGCATCAGATGCAGCCTCAAACTCA
GTTGCAGCAGGGAAGGAGGGAGCGAGGGAGGGTGGCAGAGCTGCCTCATG
CCTCAAGGATGACTCCACCAAGTCAACGGTTGTACAATCGACGCATGCCT
TCCTCCTCCGAGGACGAGGAGGCGATGGAAGTAGGGGCCGAAGGGGAGAG
TGAGAGCAGTGTGGTTTCGAGCTTGTCGTCTGACGACGATTATGGCGGGG
AGGACGAGGAGGAGGAGGAGGAACAAGAGCAGCAGCAGCAGCAGCAGTTG
CAGCAGCAGCAGAGGCGGCAACAGCTGCAGAGGCAGAAGCAGCTGCTGCA
GCAGGAAAGGCGACGTCGAGCGCAGCACCACTACCACCACCATCATCATC
ACCATCATCACACTCTCAAGACGGGAGGGGGCGTGGGCGGAGGAAAATTG
GGAGGGAAGGTGGGAGGAGCGGGAATGGTCTCGAAGCGCCAGCAGCAGAT
TCAGCAGCAGCAACAGCAGATGGAGCTCCAACAGGAGTGGCGCAAGCAGC
AGCAGCTGCTGCAGCAGCAGGACGTGGGAGTAGACGAGGAGGAGGCGGCG
ATGCAGATGGCGAGTTTCAAACTGGGTCGATTTTGGGGGGGAGGGAGGGA
GGGAGGGGGGGAAGGGAGGGCGGCGGTGGTCAAAACGGTGGAGGTGTGA

Synonyms

Publications