NO10G03330.1, NO10G03330.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO10G03330.1
Unique Name	NO10G03330.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4576
Alignment location	chr10:932923..938112 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr10	genome	chr10:932923..938112 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO10G03330.1 vs.
Match: EWM25546.1 (hypothetical protein Naga_100130g8 [Nannochloropsis gaditana])

HSP 1 Score: 993.4 bits (2567), Expect = 6.000e-286
Identity = 679/1234 (55.02%), Postives = 796/1234 (64.51%), Query Frame = 0

Query:    1 MEKSRVQAYLQSACSVLGFSVGEIWCCRDNQDQASPQDLRFIQLYTSPEFEKYRPQLIEPPAEP--PPSSSNDQHGSNGGSSRHPPADLSKHCFSPLICAAVQEAKQIVWAYTPAYDGLMGRAALPLRSAVGAPVCTIGQDLVILIMFSPTVLELTEEAHRFLFTVAQAASDAVCGFLPASLASPSSSSFTSGCRNRPSSSTSSSSSSSFSSSSMQRHTRAFIEALPASVTFQMVQMA-ETVGINLPIKTEFLETFNSIYNPPPPPLMPMTRGESDEGHGERLTHGEGGREDGDDDLDIDAFDSLPPLEDCFLPADVLEDAALMEGLREGGVGGDDWDFGAALDFIFDKDQGGEELGVGTEGEWFGPGRGREGGVGEQQQQQQQQQQQQQQQQQQQQQQQQQQEQRKQFQGSGRDQITGGERREEMEGGGSALIPKREHECLGGGGGEGGDGRTMMEEEVDSPIRFFYEDAIQKLRFEEFVKGFLSMSVFHTAECWVARGGETLEQVYCATCLADIQSWVQFSSKLHGDTKRALPARVLVENRAIWERDFERLNPSSGEGGQGGREGGGGKHVIQTAFGLPVHIDKSHRLIVIFYSTFSIEPAQVTESFVKRALDMLWNKDAQCAAALLAEEQQQFKLQYEQQLQQPQHQQYGHQRGKGGQSVPSLSSSIYSDMGDDNCDSWAALPSPSPSPPPSLEYQQQHVQQQQQQQQQPLMQQQQQQLQVSPLTLGTQTWRRGGGGGGGGGGGGGGGGGGGGGGEIWVGGHQSL----KQQQQ---QQHQQQQPVYVFGYPPQASSSPSSSSSSFASPTTSRPYHHHQAAVAASIATT----SSSSSSF------SQPPPGGGGGAAGPGFGTPPPISY-CQTAIPTTQGGVPVPAPLVSGGAGGGRGQQQQQQQQE------GGQQFLVAGQQQHQQHQHHQQHEEEVGGGGKTTLIHLPPGSSLPPLGGPIYIGGTLYYPQQQ-------PKQQQQQQQQRPKEVQVQQY---GGGGKRSTSGSGFSFASSSSFSSSPSNGVNIAASMMPPPLSRSSSNQQLLLQHQQQQQPQSVHFGQAGRSSGGATFVSIQQQ--QLSEGEVKEMMLLS-----ARSSPSLDGGTNEGRGGFGVLPRTPSEMDLLLNQDGKGGGSGG-GGRKVCKSDACDLPTAKRSPYCPQHTGARHCQHPGCTKCAQGNTKFCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGK 1190
            ME+SR+QAYLQSACSVLGFSVGEIWCC D +D ASP +LRFIQLYTSPE+++YR QLIEPP +    P+  +D       +    P D+S H FSPL+CAAVQEAKQ+VWA TPA DGL+ R +L LRSAVG PVC+IG+++V+L+MFSP VLELTEEAHRFL+TVAQAASDAVCGFLPAS+AS   +S   G R+  S  T+   ++         HTR  IEALPASVTFQMV+MA E VG+N+PIKTEFLETFNSIYNPPPPPLMP+  G+   G GE            +  LD+DAFDSLPPLEDCFLP ++LED  LM GLR+ G+ G+DWDFGAALDFIFDKDQGGEELGVGTEGEWFGPG+GREGG        +  Q  +  Q  +  Q             SG D      ++E                 +GG  G+G D     E+  DS IRFFYEDA+Q+LRFEEFVKGFLSMSVFHTAECWVARG ETLEQVYCATCLAD+QSWV+FSSKLHGDT+RALPARVLVEN+AIWERD +RLNPS   GG     GG GKHVIQTAFGLPVH+D+SHRL+VIFYST+SIEPA++ ESFVKRALD+LWNKDAQ AAALLAE+QQ+     +QQL Q QH+  G      G S  S S S+ S++G+D   +W            +L+    H  + Q  QQ           Q+SP  +G     R G G G G                 +G   S      QQQQ   QQ QQQQPVYVFGY PQ SSS SSS  S  S TTS PYHHHQAA++ +  ++     S++S+F      S  PP  GGGAAGPGFGTPPP++Y   T I TT GG+PVPAP  +GG G    QQQ  QQQ+      G Q     GQ               VGG G TTLIHLPPGSSLPPLGG I IGGTLYYPQ Q       P QQ  Q QQ P       +   GGGG      SG +  S+  FS     G NIAASMMPPP +RS S  Q        Q PQS+ F Q+GR     + +S++       +G   E ++ S     +  SP   G  +E   G G LPRTPS+ ++ +    + GG+GG  GRK+CKS++CD PTAKRSPYC QHTG RHCQHPGC KCAQGNTK+CIAHGGGRRCTYPGCTKGARDKNFCAAHGGGK
Sbjct:    1 MEQSRLQAYLQSACSVLGFSVGEIWCCNDTKDAASPLNLRFIQLYTSPEYDRYRSQLIEPPPDALEAPARRDD-------AKSPVPMDVSGHSFSPLVCAAVQEAKQVVWASTPAKDGLLSRPSLQLRSAVGVPVCSIGKEVVLLLMFSPAVLELTEEAHRFLYTVAQAASDAVCGFLPASVASSLVTSAAWGPRSPLSDPTAPGENN-------MPHTRTLIEALPASVTFQMVEMASEMVGVNVPIKTEFLETFNSIYNPPPPPLMPVAGGD---GQGE------------EKGLDLDAFDSLPPLEDCFLPTELLEDGVLMSGLRDEGMTGEDWDFGAALDFIFDKDQGGEELGVGTEGEWFGPGKGREGGEVLNGGMTEGGQPDRLSQHTEASQP------------SGMDDNQSNLKQE-----------------VGGLQGKGSD----REQGEDSVIRFFYEDALQRLRFEEFVKGFLSMSVFHTAECWVARGKETLEQVYCATCLADVQSWVRFSSKLHGDTQRALPARVLVENQAIWERDAQRLNPSGAGGGGMENGGGAGKHVIQTAFGLPVHVDQSHRLVVIFYSTYSIEPAEIMESFVKRALDLLWNKDAQHAAALLAEQQQE-----QQQLLQLQHESSGGGSPSLGLSEASSSYSLGSELGEDMHTNWRT---------SNLDNTGNHDGRIQSGQQ-----------QMSPHGVG---GLRSGQGSGQGQPQRQSSFSSMTKHSDMMGSSTSTYAFEGQQQQHHPQQQQQQQPVYVFGYTPQDSSSTSSSYPS--SSTTSHPYHHHQAALSTTTPSSPFSGPSATSAFQRGSTTSSLPP--GGGAAGPGFGTPPPLTYTSSTPILTTHGGIPVPAPRPAGGQGSAGSQQQSSQQQQPQPSRPGSQPSCGGGQGTDL---------GTVGGQGLTTLIHLPPGSSLPPLGGAINIGGTLYYPQHQVTGLQGAPYQQLPQHQQHPSSFGHGAHTGPGGGGSLHREDSGGT--SNLDFSMDLPAGGNIAASMMPPPATRSPSFAQ-----ADHQAPQSIRFAQSGRQGEKGSVLSVRHDGGGSDKGTRGETVMHSGGRNVSSISPHASGAQSE--TGCGGLPRTPSDYEMHMGGPSEMGGAGGVTGRKICKSESCDQPTAKRSPYCSQHTGVRHCQHPGCIKCAQGNTKYCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGK 1122

The following BLAST results are available for this feature:

BLAST of NO10G03330.1 vs.

BLAST of NO10G03330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM25546.1	6.000e-286	55.02	hypothetical protein Naga_100130g8 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO10G03330	NO10G03330	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03330.1	NO10G03330.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO10G03330.1.cds1	NO10G03330.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03330.1.cds2	NO10G03330.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03330.1.cds3	NO10G03330.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03330.1.cds4	NO10G03330.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO10G03330.1.cds5	NO10G03330.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr10:932923..938112-
coding sequence from alignment at chr10:932923..938112-

mRNA sequence

>NO10G03330.1 ID=NO10G03330.1|Name=NO10G03330.1|organism=Nannochloropsis oceanica|type=mRNA|length=4576bp
ATGGAGAAGTCACGCGTTCAAGCATACCTGCAATCAGCCTGTTCGGTCCT
GGGCTTCAGTGTAGGGGAGATCTGGTGCTGTCGAGACAACCAAGACCAAG
CCTCCCCACAAGACCTGCGCTTCATCCAGCTCTACACCTCACCTGAATTC
GAGAAGTATCGCCCCCAACTGATCGAGCCACCTGCCGAACCTCCCCCTTC
ATCGAGCAATGATCAGCACGGCAGCAATGGAGGGAGCAGCCGTCACCCTC
CAGCCGACCTTAGCAAGCATTGCTTTTCCCCGCTCATCTGTGCTGCAGTT
CAGGAAGCCAAGCAAATTGTGTGGGCATACACGCCTGCGTATGACGGCCT
CATGGGCCGTGCCGCCCTCCCTCTTCGCTCCGCCGTCGGGGCGCCCGTTT
GTACGATTGGGCAGGACCTCGTTATCCTCATCATGTTCTCACCCACGGTG
CTGGAACTTACGGAAGAAGCGCACCGCTTCCTCTTCACGGTCGCCCAAGC
CGCTTCAGATGCTGTGTGTGGCTTCCTCCCCGCTTCCCTCGCCTCCCCTT
CCTCTTCTTCCTTCACCAGCGGCTGCAGGAATAGGCCAAGCTCGTCCACA
TCCTCGTCGTCGTCCTCCTCCTTCTCCTCCTCCTCCATGCAGCGCCACAC
TCGCGCCTTCATCGAGGCCCTGCCCGCCTCGGTGACATTTCAAATGGTCC
AAATGGCCGAGACAGTTGGGATTAATCTCCCCATCAAGACTGAATTCCTC
GAAACGTTTAACTCGATTTATAACCCTCCACCGCCTCCCCTCATGCCCAT
GACCAGAGGGGAAAGTGACGAAGGCCACGGGGAACGACTGACGCATGGCG
AAGGAGGGAGGGAGGATGGGGACGATGATTTGGACATTGATGCCTTTGAC
TCGCTTCCGCCATTGGAAGATTGTTTCTTGCCCGCGGACGTGCTGGAGGA
CGCGGCACTGATGGAAGGGCTGAGGGAGGGAGGGGTGGGAGGCGACGACT
GGGATTTCGGGGCTGCGCTTGATTTTATTTTTGATAAAGACCAGGGGGGG
GAAGAGCTCGGGGTGGGGACGGAGGGAGAGTGGTTCGGGCCGGGGAGAGG
GAGGGAGGGAGGAGTGGGAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
GAGCAGCGAAAACAATTTCAGGGGTCTGGCAGAGATCAAATAACTGGAGG
AGAAAGGAGGGAAGAGATGGAAGGAGGAGGAAGTGCACTCATTCCGAAGA
GGGAGCATGAATGCCTGGGAGGAGGAGGAGGAGAGGGAGGAGACGGGAGA
ACGATGATGGAGGAAGAGGTCGACTCACCCATTCGCTTCTTTTACGAGGA
TGCCATCCAGAAGTTGCGCTTCGAGGAATTTGTGAAGGGTTTTTTGAGCA
TGTCCGTTTTCCATACGGCCGAATGCTGGGTGGCCAGGGGGGGGGAGACT
CTGGAGCAGGTCTACTGCGCCACCTGCCTCGCCGACATCCAGTCATGGGT
GCAGTTTTCTTCCAAACTCCACGGTGACACCAAGCGAGCCCTCCCCGCTC
GTGTCCTTGTCGAGAATCGGGCCATATGGGAGCGGGACTTCGAACGCCTC
AATCCCTCTTCCGGCGAGGGCGGGCAGGGAGGGAGGGAAGGAGGAGGGGG
GAAACACGTCATCCAAACTGCGTTTGGTCTTCCCGTGCACATCGACAAGA
GCCATCGACTCATTGTCATCTTTTACTCCACCTTCTCCATCGAACCTGCC
CAAGTCACGGAGTCCTTCGTAAAGCGAGCCCTAGACATGCTCTGGAATAA
AGATGCCCAATGTGCTGCCGCCCTCCTCGCGGAAGAACAGCAACAATTCA
AGCTTCAATACGAACAGCAGCTACAGCAGCCGCAGCATCAACAGTACGGG
CACCAGAGAGGGAAGGGAGGGCAGAGCGTGCCGTCCCTCTCGTCCTCGAT
CTATTCTGATATGGGTGATGATAATTGTGACTCCTGGGCTGCGCTCCCTT
CTCCTTCTCCCTCTCCTCCTCCTTCCCTAGAGTATCAACAGCAGCACGTG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCTCATGCAGCAGCAGCAGCA
GCAGCTGCAGGTGTCGCCGTTGACTCTAGGAACGCAGACGTGGAGGAGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGAAATATGGGTTGGAGGGCACCAATCATTGAAACA
GCAGCAACAGCAGCAACATCAGCAGCAGCAGCCGGTGTACGTCTTTGGCT
ACCCGCCTCAAGCCTCGTCTTCCCCCTCATCCTCCTCCTCCTCCTTCGCC
TCCCCCACAACTTCTCGACCCTACCACCACCACCAAGCTGCCGTCGCTGC
CAGCATTGCCACCACCTCTTCTTCCTCCTCCTCTTTTTCACAGCCCCCAC
CCGGAGGCGGAGGGGGCGCAGCAGGGCCTGGTTTTGGCACGCCCCCTCCC
ATAAGCTACTGCCAAACAGCCATCCCCACAACCCAAGGGGGAGTTCCAGT
TCCAGCGCCTCTTGTCTCCGGAGGAGCAGGAGGGGGAAGAGGCCAGCAGC
AGCAGCAGCAGCAGCAGGAGGGGGGACAGCAATTTTTGGTGGCGGGGCAG
CAGCAGCACCAGCAGCACCAGCACCACCAGCAGCACGAGGAGGAGGTAGG
GGGTGGGGGGAAGACAACACTTATTCATCTTCCTCCCGGTTCTTCCCTAC
CGCCCTTGGGAGGACCCATTTATATTGGTGGTACTCTCTACTATCCCCAA
CAGCAGCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCGAAAGAAGT
GCAAGTGCAGCAGTACGGGGGAGGAGGAAAAAGGAGCACCAGTGGTAGTG
GCTTTTCCTTCGCTTCTTCCTCCTCCTTCTCTTCCTCACCCTCGAACGGG
GTCAATATCGCCGCGTCCATGATGCCTCCTCCTCTTTCCCGCTCCTCTTC
CAATCAGCAGCTGCTGCTGCAGCATCAGCAGCAGCAGCAACCACAGTCTG
TGCATTTCGGCCAAGCAGGGAGGAGCAGTGGGGGGGCCACATTTGTCTCG
ATCCAGCAGCAGCAGTTGTCGGAGGGAGAAGTGAAGGAGATGATGCTGCT
ATCTGCACGTTCCTCCCCCTCTCTCGATGGGGGCACAAACGAAGGACGGG
GGGGGTTTGGAGTCTTGCCCCGTACACCCTCGGAAATGGACTTGCTCTTG
AATCAGGACGGGAAAGGAGGTGGGTCGGGTGGTGGTGGAAGGAAAGTATG
CAAGAGCGATGCATGTGACCTGCCCACGGCCAAGCGGTCTCCCTATTGCC
CTCAGCACACGGGCGCGAGGCACTGCCAACACCCAGGCTGCACGAAATGC
GCGCAAGGAAACACCAAATTCTGTATTGCCCATGGCGGTGGTCGGCGGTG
TACTTATCCAGGCTGCACCAAGGGCGCCCGAGACAAAAACTTTTGTGCGG
CGCACGGTGGAGGCAAGGTATGAAGGCGGGAGAGAGGGAGGGAGAGAGGG
ATAGTGATTGTATGTGTGCCGTTTCTGGGCCGCAACAAGGATATAAAGAC
CATTACCTGCGGGTGGCGCGCAAATGGGGGGGGGGAGGAGGAATAGAGCG
ATGGTTTGTGAGTGTTTCCTCTTCCCTCCCTTAATACGACTGCTGCATCG
ATGGCTGGCGTCAGTTGGCTGTCGATGGCTCCTTCACGTGCAACGGTCAC
AGCGGTGACCGCAGATGTTAGTACCAAGAATGCACCCATGCCCTCCCTTT
CCTCCCTTTCCTCCCTCTACCTCCATTTCCCCCTCTACAGCGTTGCTGCA
TCGATGGCTGCACTAAGTCGGCAGTCGGAGGCTCCTTTATGTGCACTGCG
CACGGCGGCGGCCGCCGGTGCCAGTATCAGGAATGCACACGCTCGGCGCA
ATCCAGCACAAATTTCTGCGTGCGACACGGGGGGGGAAGGAAATGTCAGG
TGGAGGGGTGTCAGAAGGTGGCTCGAGGAAGGACGAGCTTCTGTGCGGCC
CATGGGGGGGGATCAGGTGCAAAGTGTCGGGATGTAACAAGGCGGCGGTG
GGTAAATTTCAAATGTGTCGAACGCACAGCGGGTATCCTAAAAAGAGGGC
AAGCGAGCAGCAGGAGGGCGAGGGCGGGGGGGAGGAAGTGGGGGAGGATG
GGGGGTTCTTGCCGAGTTCGTTAATGTCGTCGTCGCCGTCGTCCTCCTCG
TCTTCGGTGGGAACGATTGGAGACCTGCATAACGTCAACCCAGCCAAGAA
GAGAATGATTGCGTTGGGCACGGAGGGAAGGAAGGAGGGAGGGAGGGAGG
GAGGGAGGGAAGAGAAGTATGGGACACCCAAGAATGCCATGGCTACGTAC
GCGGCAGCTTTTAACTCTTACCCGCCTCCGCTGTAAATACCACGGATGGG
AGGGAGGGAGGGGGGAAAGGAATGAGTGTCTTTTATTTTTGTTTTTTCCA
CCCTCGGTGTCCAGTGTACTGAGGGC

protein sequence of NO10G03330.1

>NO10G03330.1-protein ID=NO10G03330.1-protein|Name=NO10G03330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1191bp
MEKSRVQAYLQSACSVLGFSVGEIWCCRDNQDQASPQDLRFIQLYTSPEF
EKYRPQLIEPPAEPPPSSSNDQHGSNGGSSRHPPADLSKHCFSPLICAAV
QEAKQIVWAYTPAYDGLMGRAALPLRSAVGAPVCTIGQDLVILIMFSPTV
LELTEEAHRFLFTVAQAASDAVCGFLPASLASPSSSSFTSGCRNRPSSST
SSSSSSSFSSSSMQRHTRAFIEALPASVTFQMVQMAETVGINLPIKTEFL
ETFNSIYNPPPPPLMPMTRGESDEGHGERLTHGEGGREDGDDDLDIDAFD
SLPPLEDCFLPADVLEDAALMEGLREGGVGGDDWDFGAALDFIFDKDQGG
EELGVGTEGEWFGPGRGREGGVGEQQQQQQQQQQQQQQQQQQQQQQQQQQ
EQRKQFQGSGRDQITGGERREEMEGGGSALIPKREHECLGGGGGEGGDGR
TMMEEEVDSPIRFFYEDAIQKLRFEEFVKGFLSMSVFHTAECWVARGGET
LEQVYCATCLADIQSWVQFSSKLHGDTKRALPARVLVENRAIWERDFERL
NPSSGEGGQGGREGGGGKHVIQTAFGLPVHIDKSHRLIVIFYSTFSIEPA
QVTESFVKRALDMLWNKDAQCAAALLAEEQQQFKLQYEQQLQQPQHQQYG
HQRGKGGQSVPSLSSSIYSDMGDDNCDSWAALPSPSPSPPPSLEYQQQHV
QQQQQQQQQPLMQQQQQQLQVSPLTLGTQTWRRGGGGGGGGGGGGGGGGG
GGGGGEIWVGGHQSLKQQQQQQHQQQQPVYVFGYPPQASSSPSSSSSSFA
SPTTSRPYHHHQAAVAASIATTSSSSSSFSQPPPGGGGGAAGPGFGTPPP
ISYCQTAIPTTQGGVPVPAPLVSGGAGGGRGQQQQQQQQEGGQQFLVAGQ
QQHQQHQHHQQHEEEVGGGGKTTLIHLPPGSSLPPLGGPIYIGGTLYYPQ
QQPKQQQQQQQQRPKEVQVQQYGGGGKRSTSGSGFSFASSSSFSSSPSNG
VNIAASMMPPPLSRSSSNQQLLLQHQQQQQPQSVHFGQAGRSSGGATFVS
IQQQQLSEGEVKEMMLLSARSSPSLDGGTNEGRGGFGVLPRTPSEMDLLL
NQDGKGGGSGGGGRKVCKSDACDLPTAKRSPYCPQHTGARHCQHPGCTKC
AQGNTKFCIAHGGGRRCTYPGCTKGARDKNFCAAHGGGKV*

mRNA from alignment at chr10:932923..938112-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO10G03330.1 ID=NO10G03330.1|Name=NO10G03330.1|organism=Nannochloropsis oceanica|type=mRNA|length=5190bp|location=Sequence derived from alignment at chr10:932923..938112- (Nannochloropsis oceanica)
ATGGAGAAGTCACGCGTTCAAGCATACCTGCAATCAGCCTGTTCGGTCCT
GGGCTTCAGTGTAGGGGAGATCTGGTGCTGTCGAGACAACCAAGGTGCGT
TTCCAGGGCGCTCCGACTGCTCGTGCATCTTTCTATTGACTCCACGTCCT
TTATCTATTCATGCCACCCCTTCTTCTCTTCTGCTTCCCCTCACTCGTTT
ATCAATCAAAGAGCCCGCTCTGTATCCGATTCTTCCGCTGAAATGCCTCT
AAACTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTT
CCTCCCTCCCCCAGACCAAGCCTCCCCACAAGACCTGCGCTTCATCCAGC
TCTACACCTCACCTGAATTCGAGAAGTATCGCCCCCAACTGATCGAGCCA
CCTGCCGAACCTCCCCCTTCATCGAGCAATGATCAGCACGGCAGCAATGG
AGGGAGCAGCCGTCACCCTCCAGCCGACCTTAGCAAGCATTGCTTTTCCC
CGCTCATCTGTGCTGCAGTTCAGGAAGCCAAGCAAATTGTGTGGGCATAC
ACGCCTGCGTATGACGGCCTCATGGGCCGTGCCGCCCTCCCTCTTCGCTC
CGCCGTCGGGGCGCCCGTTTGTACGATTGGGCAGGACCTCGTTATCCTCA
TCATGTTCTCACCCACGGTGCTGGAACTTACGGAAGAAGCGCACCGCTTC
CTCTTCACGGTCGCCCAAGCCGCTTCAGATGCTGTGTGTGGCTTCCTCCC
CGCTTCCCTCGCCTCCCCTTCCTCTTCTTCCTTCACCAGCGGCTGCAGGA
ATAGGCCAAGCTCGTCCACATCCTCGTCGTCGTCCTCCTCCTTCTCCTCC
TCCTCCATGCAGCGCCACACTCGCGCCTTCATCGAGGCCCTGCCCGCCTC
GGTGACATTTCAAATGGTCCAAATGGCCGAGACAGTTGGGATTAATCTCC
CCATCAAGACTGAATTCCTCGAAACGTTTAACTCGATTTATAACCCTCCA
CCGCCTCCCCTCATGCCCATGACCAGAGGGGAAAGTGACGAAGGCCACGG
GGAACGACTGACGCATGGCGAAGGAGGGAGGGAGGATGGGGACGATGATT
TGGACATTGATGCCTTTGACTCGCTTCCGCCATTGGAAGATTGTTTCTTG
CCCGCGGACGTGCTGGAGGACGCGGCACTGATGGAAGGGCTGAGGGAGGG
AGGGGTGGGAGGCGACGACTGGGATTTCGGGGCTGCGCTTGATTTTATTT
TTGATAAAGACCAGGGGGGGGAAGAGCTCGGGGTGGGGACGGAGGGAGAG
TGGTTCGGGCCGGGGAGAGGGAGGGAGGGAGGAGTGGGAGAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGGAGCAGCGAAAACAATTTCAGGGGTCTGGC
AGAGATCAAATAACTGGAGGAGAAAGGAGGGAAGAGATGGAAGGAGGAGG
AAGTGCACTCATTCCGAAGAGGGAGCATGAATGCCTGGGAGGAGGAGGAG
GAGAGGGAGGAGACGGGAGAACGATGATGGAGGAAGAGGTCGACTCACCC
ATTCGCTTCTTTTACGAGGATGCCATCCAGAAGTTGCGCTTCGAGGAATT
TGTGAAGGGTTTTTTGAGCATGTCCGTTTTCCATACGGCCGAATGCTGGG
TGGCCAGGGGGGGGGAGACTCTGGAGCAGGTAGGATACGCCAACGTCTTT
CCCACCGACAATTTGAATTTATATTGCCTCGGTCTTCTGTGTTGTCAACG
TCCTTTTCTTCTTTCCCCTCTTTATTTCTCCCCCCAAAGTTCCATGATGA
CATCACCCCCTCACTTTCCCAACTTCCCTTCCCTCCCTCCCTCCCCCCCT
CCCTCCCTCCCCTTCCAGGTCTACTGCGCCACCTGCCTCGCCGACATCCA
GTCATGGGTGCAGTTTTCTTCCAAACTCCACGGTGACACCAAGCGAGCCC
TCCCCGCTCGTGTCCTTGTCGAGAATCGGGCCATATGGGAGCGGGACTTC
GAACGCCTCAATCCCTCTTCCGGCGAGGGCGGGCAGGGAGGGAGGGAAGG
AGGAGGGGGGAAACACGTCATCCAAACTGCGTTTGGTCTTCCCGTGCACA
TCGACAAGAGCCATCGACTCATTGTCATCTTTTACTCCACCTTCTCCATC
GAACCTGCCCAAGTCACGGAGTCCTTCGTAAAGCGAGCCCTAGACATGCT
CTGGAATAAAGATGCCCAATGTGCTGCCGCCCTCCTCGCGGAAGAACAGC
AACAATTCAAGCTTCAATACGAACAGCAGCTACAGCAGCCGCAGCATCAA
CAGTACGGGCACCAGAGAGGGAAGGGAGGGCAGAGCGTGCCGTCCCTCTC
GTCCTCGATCTATTCTGATATGGGTGATGATAATTGTGACTCCTGGGCTG
CGCTCCCTTCTCCTTCTCCCTCTCCTCCTCCTTCCCTAGAGTATCAACAG
CAGCACGTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCTCATGCAGCA
GCAGCAGCAGCAGCTGCAGGTGTCGCCGTTGACTCTAGGTCTTTCAAGAA
GTGGATCCGGAGGAGGAAGGGGGGGGAAGTGCTTGACGATCTGCCCCTCT
TGCTGCCCTTGGACGAAGGAACGCAGACGTGGAGGAGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGAAATATGGGTTGGAGGGCACCAATCATTGAAACAGCAGCAACAGC
AGCAACATCAGCAGCAGCAGCCGGTGTACGTCTTTGGCTACCCGCCTCAA
GCCTCGTCTTCCCCCTCATCCTCCTCCTCCTCCTTCGCCTCCCCCACAAC
TTCTCGACCCTACCACCACCACCAAGCTGCCGTCGCTGCCAGCATTGCCA
CCACCTCTTCTTCCTCCTCCTCTTTTTCACAGCCCCCACCCGGAGGCGGA
GGGGGCGCAGCAGGGCCTGGTTTTGGCACGCCCCCTCCCATAAGCTACTG
CCAAACAGCCATCCCCACAACCCAAGGGGGAGTTCCAGTTCCAGCGCCTC
TTGTCTCCGGAGGAGCAGGAGGGGGAAGAGGCCAGCAGCAGCAGCAGCAG
CAGCAGGAGGGGGGACAGCAATTTTTGGTGGCGGGGCAGCAGCAGCACCA
GCAGCACCAGCACCACCAGCAGCACGAGGAGGAGGTAGGGGGTGGGGGGA
AGACAACACTTATTCATCTTCCTCCCGGTTCTTCCCTACCGCCCTTGGGA
GGACCCATTTATATTGGTGGTACTCTCTACTATCCCCAACAGCAGCCGAA
GCAGCAGCAGCAGCAGCAGCAGCAGCGGCCGAAAGAAGTGCAAGTGCAGC
AGTACGGGGGAGGAGGAAAAAGGAGCACCAGTGGTAGTGGCTTTTCCTTC
GCTTCTTCCTCCTCCTTCTCTTCCTCACCCTCGAACGGGGTCAATATCGC
CGCGTCCATGATGCCTCCTCCTCTTTCCCGCTCCTCTTCCAATCAGCAGC
TGCTGCTGCAGCATCAGCAGCAGCAGCAACCACAGTCTGTGCATTTCGGC
CAAGCAGGGAGGAGCAGTGGGGGGGCCACATTTGTCTCGATCCAGCAGCA
GCAGTTGTCGGAGGGAGAAGTGAAGGAGATGATGCTGCTATCTGCACGTT
CCTCCCCCTCTCTCGATGGGGGCACAAACGAAGGACGGGGGGGGTTTGGA
GTCTTGCCCCGTACACCCTCGGAAATGGACTTGCTCTTGAATCAGGACGG
GAAAGGAGGTGGGTCGGGTGGTGGTGGAAGGAAAGTATGCAAGAGCGATG
CATGTGACCTGCCCACGGCCAAGCGGTCTCCCTATTGCCCTCAGCACACG
GGCGCGAGGCACTGCCAACACCCAGGTGCGGAGGGAGGGAGGGAAGGAGG
GAGGGGGGGGAGGGAATGAGCCGGAGCCAACGATTAGCAAGACGCTGACA
TACTCTCCCTTCCTCCCCTCCCTTCCTCCCTTTCTCCTCGCTTTCCTCAG
GCTGCACGAAATGCGCGCAAGGAAACACCAAATTCTGTATTGCCCATGGC
GGTGGTCGGCGGTGTACTTATCCAGGCTGCACCAAGGGCGCCCGAGACAA
AAACTTTTGTGCGGCGCACGGTGGAGGCAAGGTATGAAGGCGGGAGAGAG
GGAGGGAGAGAGGGATAGTGATTGTATGTGTGCCGTTTCTGGGCCGCAAC
AAGGATATAAAGACCATTACCTGCGGGTGGCGCGCAAATGGGGGGGGGGA
GGAGGAATAGAGCGATGGTTTGTGAGTGTTTCCTCTTCCCTCCCTTAATA
CGACTGCTGCATCGATGGCTGGCGTCAGTTGGCTGTCGATGGCTCCTTCA
CGTGCAACGGTCACAGCGGTGACCGCAGATGTTAGTACCAAGAATGCACC
CATGCCCTCCCTTTCCTCCCTTTCCTCCCTCTACCTCCATTTCCCCCTCT
ACAGCGTTGCTGCATCGATGGCTGCACTAAGTCGGCAGTCGGAGGCTCCT
TTATGTGCACTGCGCACGGCGGCGGCCGCCGGTGCCAGTATCAGGAATGC
ACACGCTCGGCGCAATCCAGCACAAATTTCTGCGTGCGACACGGGGGGGG
AAGGAAATGTCAGGTGGAGGGGTGTCAGAAGGTGGCTCGAGGAAGGACGA
GCTTCTGTGCGGCCCATGGGGGGGGATCAGGTGCAAAGTGTCGGGATGTA
ACAAGGCGGCGGTGGGTAAATTTCAAATGTGTCGAACGCACAGCGGGTAT
CCTAAAAAGAGGGCAAGCGAGCAGCAGGAGGGCGAGGGCGGGGGGGAGGA
AGTGGGGGAGGATGGGGGGTTCTTGCCGAGTTCGTTAATGTCGTCGTCGC
CGTCGTCCTCCTCGTCTTCGGTGGGAACGATTGGAGACCTGCATAACGTC
AACCCAGCCAAGAAGAGAATGATTGCGTTGGGCACGGAGGGAAGGAAGGA
GGGAGGGAGGGAGGGAGGGAGGGAAGAGAAGTATGGGACACCCAAGAATG
CCATGGCTACGTACGCGGCAGCTTTTAACTCTTACCCGCCTCCGCTGTAA
ATACCACGGATGGGAGGGAGGGAGGGGGGAAAGGAATGAGTGTCTTTTAT
TTTTGTTTTTTCCACCCTCGGTGTCCAGTGTACTGAGGGC

Coding sequence (CDS) from alignment at chr10:932923..938112-

>NO10G03330.1 ID=NO10G03330.1|Name=NO10G03330.1|organism=Nannochloropsis oceanica|type=CDS|length=3573bp|location=Sequence derived from alignment at chr10:932923..938112- (Nannochloropsis oceanica)
ATGGAGAAGTCACGCGTTCAAGCATACCTGCAATCAGCCTGTTCGGTCCT
GGGCTTCAGTGTAGGGGAGATCTGGTGCTGTCGAGACAACCAAGACCAAG
CCTCCCCACAAGACCTGCGCTTCATCCAGCTCTACACCTCACCTGAATTC
GAGAAGTATCGCCCCCAACTGATCGAGCCACCTGCCGAACCTCCCCCTTC
ATCGAGCAATGATCAGCACGGCAGCAATGGAGGGAGCAGCCGTCACCCTC
CAGCCGACCTTAGCAAGCATTGCTTTTCCCCGCTCATCTGTGCTGCAGTT
CAGGAAGCCAAGCAAATTGTGTGGGCATACACGCCTGCGTATGACGGCCT
CATGGGCCGTGCCGCCCTCCCTCTTCGCTCCGCCGTCGGGGCGCCCGTTT
GTACGATTGGGCAGGACCTCGTTATCCTCATCATGTTCTCACCCACGGTG
CTGGAACTTACGGAAGAAGCGCACCGCTTCCTCTTCACGGTCGCCCAAGC
CGCTTCAGATGCTGTGTGTGGCTTCCTCCCCGCTTCCCTCGCCTCCCCTT
CCTCTTCTTCCTTCACCAGCGGCTGCAGGAATAGGCCAAGCTCGTCCACA
TCCTCGTCGTCGTCCTCCTCCTTCTCCTCCTCCTCCATGCAGCGCCACAC
TCGCGCCTTCATCGAGGCCCTGCCCGCCTCGGTGACATTTCAAATGGTCC
AAATGGCCGAGACAGTTGGGATTAATCTCCCCATCAAGACTGAATTCCTC
GAAACGTTTAACTCGATTTATAACCCTCCACCGCCTCCCCTCATGCCCAT
GACCAGAGGGGAAAGTGACGAAGGCCACGGGGAACGACTGACGCATGGCG
AAGGAGGGAGGGAGGATGGGGACGATGATTTGGACATTGATGCCTTTGAC
TCGCTTCCGCCATTGGAAGATTGTTTCTTGCCCGCGGACGTGCTGGAGGA
CGCGGCACTGATGGAAGGGCTGAGGGAGGGAGGGGTGGGAGGCGACGACT
GGGATTTCGGGGCTGCGCTTGATTTTATTTTTGATAAAGACCAGGGGGGG
GAAGAGCTCGGGGTGGGGACGGAGGGAGAGTGGTTCGGGCCGGGGAGAGG
GAGGGAGGGAGGAGTGGGAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
GAGCAGCGAAAACAATTTCAGGGGTCTGGCAGAGATCAAATAACTGGAGG
AGAAAGGAGGGAAGAGATGGAAGGAGGAGGAAGTGCACTCATTCCGAAGA
GGGAGCATGAATGCCTGGGAGGAGGAGGAGGAGAGGGAGGAGACGGGAGA
ACGATGATGGAGGAAGAGGTCGACTCACCCATTCGCTTCTTTTACGAGGA
TGCCATCCAGAAGTTGCGCTTCGAGGAATTTGTGAAGGGTTTTTTGAGCA
TGTCCGTTTTCCATACGGCCGAATGCTGGGTGGCCAGGGGGGGGGAGACT
CTGGAGCAGGTCTACTGCGCCACCTGCCTCGCCGACATCCAGTCATGGGT
GCAGTTTTCTTCCAAACTCCACGGTGACACCAAGCGAGCCCTCCCCGCTC
GTGTCCTTGTCGAGAATCGGGCCATATGGGAGCGGGACTTCGAACGCCTC
AATCCCTCTTCCGGCGAGGGCGGGCAGGGAGGGAGGGAAGGAGGAGGGGG
GAAACACGTCATCCAAACTGCGTTTGGTCTTCCCGTGCACATCGACAAGA
GCCATCGACTCATTGTCATCTTTTACTCCACCTTCTCCATCGAACCTGCC
CAAGTCACGGAGTCCTTCGTAAAGCGAGCCCTAGACATGCTCTGGAATAA
AGATGCCCAATGTGCTGCCGCCCTCCTCGCGGAAGAACAGCAACAATTCA
AGCTTCAATACGAACAGCAGCTACAGCAGCCGCAGCATCAACAGTACGGG
CACCAGAGAGGGAAGGGAGGGCAGAGCGTGCCGTCCCTCTCGTCCTCGAT
CTATTCTGATATGGGTGATGATAATTGTGACTCCTGGGCTGCGCTCCCTT
CTCCTTCTCCCTCTCCTCCTCCTTCCCTAGAGTATCAACAGCAGCACGTG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCCTCTCATGCAGCAGCAGCAGCA
GCAGCTGCAGGTGTCGCCGTTGACTCTAGGAACGCAGACGTGGAGGAGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGAAATATGGGTTGGAGGGCACCAATCATTGAAACA
GCAGCAACAGCAGCAACATCAGCAGCAGCAGCCGGTGTACGTCTTTGGCT
ACCCGCCTCAAGCCTCGTCTTCCCCCTCATCCTCCTCCTCCTCCTTCGCC
TCCCCCACAACTTCTCGACCCTACCACCACCACCAAGCTGCCGTCGCTGC
CAGCATTGCCACCACCTCTTCTTCCTCCTCCTCTTTTTCACAGCCCCCAC
CCGGAGGCGGAGGGGGCGCAGCAGGGCCTGGTTTTGGCACGCCCCCTCCC
ATAAGCTACTGCCAAACAGCCATCCCCACAACCCAAGGGGGAGTTCCAGT
TCCAGCGCCTCTTGTCTCCGGAGGAGCAGGAGGGGGAAGAGGCCAGCAGC
AGCAGCAGCAGCAGCAGGAGGGGGGACAGCAATTTTTGGTGGCGGGGCAG
CAGCAGCACCAGCAGCACCAGCACCACCAGCAGCACGAGGAGGAGGTAGG
GGGTGGGGGGAAGACAACACTTATTCATCTTCCTCCCGGTTCTTCCCTAC
CGCCCTTGGGAGGACCCATTTATATTGGTGGTACTCTCTACTATCCCCAA
CAGCAGCCGAAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCCGAAAGAAGT
GCAAGTGCAGCAGTACGGGGGAGGAGGAAAAAGGAGCACCAGTGGTAGTG
GCTTTTCCTTCGCTTCTTCCTCCTCCTTCTCTTCCTCACCCTCGAACGGG
GTCAATATCGCCGCGTCCATGATGCCTCCTCCTCTTTCCCGCTCCTCTTC
CAATCAGCAGCTGCTGCTGCAGCATCAGCAGCAGCAGCAACCACAGTCTG
TGCATTTCGGCCAAGCAGGGAGGAGCAGTGGGGGGGCCACATTTGTCTCG
ATCCAGCAGCAGCAGTTGTCGGAGGGAGAAGTGAAGGAGATGATGCTGCT
ATCTGCACGTTCCTCCCCCTCTCTCGATGGGGGCACAAACGAAGGACGGG
GGGGGTTTGGAGTCTTGCCCCGTACACCCTCGGAAATGGACTTGCTCTTG
AATCAGGACGGGAAAGGAGGTGGGTCGGGTGGTGGTGGAAGGAAAGTATG
CAAGAGCGATGCATGTGACCTGCCCACGGCCAAGCGGTCTCCCTATTGCC
CTCAGCACACGGGCGCGAGGCACTGCCAACACCCAGGCTGCACGAAATGC
GCGCAAGGAAACACCAAATTCTGTATTGCCCATGGCGGTGGTCGGCGGTG
TACTTATCCAGGCTGCACCAAGGGCGCCCGAGACAAAAACTTTTGTGCGG
CGCACGGTGGAGGCAAGGTATGA

Synonyms

Publications