NO09G03760.1, NO09G03760.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G03760.1
Unique NameNO09G03760.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1091
Alignment locationchr9:1081102..1082720 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:1081102..1082720 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G03760.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03760NO09G03760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G03760.1NO09G03760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G03760.1.cds1NO09G03760.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03760.1.cds2NO09G03760.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03760.1.cds3NO09G03760.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G03760.1.cds4NO09G03760.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G03760.1 ID=NO09G03760.1|Name=NO09G03760.1|organism=Nannochloropsis oceanica|type=mRNA|length=1091bp
ATGGTGCACGGTGGAGGGGTCCACACCGGCCACTACTCGGCCTATATCAA
GGATACGATTCACGCGGGCGGGCGCTGGTTCCTCTTCGATGACGCTCTTG
TGCTCCCCGTCCGACCCGCCACAGTGCTTCGGGCCTGGGGCGGGGAGGGC
GGGGGGGCGGAAGGGGCTGGGAGTAGAGGGAGCGATCCTCTCTTCTCCTC
TTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTGGCGCAATTCTTCTCATA
CTCTATACAAAAGTGGGAAGGGCCGGGAAGAGGAGAAGACTTTCCTCTTC
CAGCAGCAGCAGCAGGAGCTTGAAGAGGAGGATGAGTGGTGGAGGGAGGG
AGGGCTGGAGGGAGGGGTGAAGCCCACCTCTTCCTTCTTCCCCAACGCGG
TGGCTTACATGCTAGTATACAGGAAGATGGAAGCCGTCGGCAGCTCTCCC
TCGGCCCCTCCCTCCTTCCCGTCCTCCCCTTCCTCCTCCTCCCCTCCTTC
ACAGACTTTGTCGCCTGCAGACGTGGAGTTGTCGATCCCCCTCCCTCCCC
ACCTCCTCTCCTGGCTCAAGGAGGAAGAGGCGGAGGAAGCGAGGAAGGAA
GAGGCGCGTCGCCTCCGCTCTCAGCTTGCGTCGGTCCGGGTATTTTGTGG
CACTATGGAGCCGAAGGAGAGGAGGAAAGAAGGGGTGGAGGTCTCCTTGC
CCAAGACGGCGACTGTAGCAGAGCTGAAGGAGCTGGCCTGGAGGGCGATG
GGCCTGGCCCATGCCGACCCTCCTGTTGCCCTCCACGACGTCCGCCTCCG
CCCTTTCTACCGTCCTCGTCCCCCCCCTCCTCCACTGCCACCTCCCCCCC
TTCCCTTGTCGTGTCGCACTGGACGAGGGGATGACGCTGAAAGAGTGCGG
GCTGAGGACGGGCTGCGGTTTGTACCTACAAGTCAAGCGCCCCGGTGAAA
AGTTTACCGTCTACATGAAGCGCTCGAATCCTCCCTCCACCCCTCCAAAG
TCCGAGTACAACCACCTCGCCCGTCTCTCCCATGCCTCCACCCACCCCGA
CGGGTACTACTACTCCTCTTTCCCCTCCCCCAGCCCCAGCT
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protein sequence of NO09G03760.1

>NO09G03760.1-protein ID=NO09G03760.1-protein|Name=NO09G03760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=316bp
MVHGGGVHTGHYSAYIKDTIHAGGRWFLFDDALVLPVRPATVLRAWGGEG
GGAEGAGSRGSDPLFSSFPSSSSSSSSWRNSSHTLYKSGKGREEEKTFLF
QQQQQELEEEDEWWREGGLEGGVKPTSSFFPNAVAYMLVYRKMEAVGSSP
SAPPSFPSSPSSSSPPSQTLSPADVELSIPLPPHLLSWLKEEEAEEARKE
EARRLRSQLASVRVFCGTMEPKERRKEGVEVSLPKTATVAELKELAWRAM
GLAHADPPVALHDVRLRPFYRPRPPPPPLPPPPLPLSCRTGRGDDAERVR
AEDGLRFVPTSQAPR*
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mRNA from alignment at chr9:1081102..1082720+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G03760.1 ID=NO09G03760.1|Name=NO09G03760.1|organism=Nannochloropsis oceanica|type=mRNA|length=1619bp|location=Sequence derived from alignment at chr9:1081102..1082720+ (Nannochloropsis oceanica)
ATGGTGCACGGTGGAGGGGTCCACACCGGTAAGCCAGCCCCCTCCCTCCC
TCCCTCGGTTTTCGTCCGCCTGCTCCACTCACGTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCAAGGCCACTACTCGGCCTATATCAAGGATAC
GATTCACGCGGGCGGGCGCTGGTTCCTCTTCGATGACGCTCTTGTGCTCC
CCGTCCGACCCGCCACAGTGCTTCGGGCCTGGGGCGGGGAGGGCGGGGGG
GCGGAAGGGGCTGGGAGTAGAGGGAGCGATCCTCTCTTCTCCTCTTTCCC
CTCCTCCTCCTCCTCCTCCTCCTCCTGGCGCAATTCTTCTCATACTCTAT
ACAAAAGTGGGAAGGGCCGGGAAGAGGAGAAGACTTTCCTCTTCCAGCAG
CAGCAGCAGGAGCTTGAAGAGGAGGATGAGTGGTGGAGGGAGGGAGGGCT
GGAGGGAGGGGTGAAGCCCACCTCTTCCTTCTTCCCCAACGCGGTGGCTT
ACATGCTAGTATACAGGAAGATGGAAGCCGTCGGGTAGGGAGGGAGGGAG
GGAGGCAGGGAGGGAAGAGGTCTCGTACATACGCACACACCCACCTTCCT
CCACTCACCTCCGCACCCTCTATACACAACCACAGCAGCTCTCCCTCGGC
CCCTCCCTCCTTCCCGTCCTCCCCTTCCTCCTCCTCCCCTCCTTCACAGA
CTTTGTCGCCTGCAGACGTGGAGTTGTCGATCCCCCTCCCTCCCCACCTC
CTCTCCTGGCTCAAGGAGGAAGAGGCGGAGGAAGCGAGGAAGGAAGAGGC
GCGTCGCCTCCGCTCTCAGCTTGCGTCGGTCCGGGTATTTTGTGGCACTA
TGGAGCCGAAGGAGAGGAGGAAAGAAGGGGTGGAGGTCTCCTTGCCCAAG
ACGGCGACTGTAGCAGAGCTGAAGGAGCTGGCCTGGAGGGTGAGCAGGGA
GAGGGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGGAGGGGGGTAGTGCT
GACATGACACTCGATTCAATCGTCAAGGTTGACGGAAGTAGGACTGGAGG
AAGGGAGGGAGGGAGGGCGGGAAAAGAGGAGAAAGGTGAGCATTGGCCTT
CACACCATCACCTCTTTCAATGCACGTGACAGGCGATGGGCCTGGCCCAT
GCCGACCCTCCTGTTGCCCTCCACGACGTCCGCCTCCGCCCTTTCTACCG
TCCTCGTCCCCCCCCTCCTCCACTGCCACCTCCCCCCCTTCCCTTGTCGT
GTCGCACTGGACGAGGGGATGACGCTGAAAGAGTGCGGGCTGAGGACGGG
CTGCGGTTTGTACCTACAAGTCAAGCGCCCCGGTGAAAAGGCAAGGAGGG
AGGGAGGGAGGGAGGGAGGGAGGGAGAGACGCAAAGTAGAGAAATAGCAG
ATTTACTGGGCAGCCTGCTGTGAAAATTCACTAACTCCCGTCACTACCCC
CCGGCCCGACTCACCTCCTTCTTCCCTCAGTTTACCGTCTACATGAAGCG
CTCGAATCCTCCCTCCACCCCTCCAAAGTCCGAGTACAACCACCTCGCCC
GTCTCTCCCATGCCTCCACCCACCCCGACGGGTACTACTACTCCTCTTTC
CCCTCCCCCAGCCCCAGCT
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Coding sequence (CDS) from alignment at chr9:1081102..1082720+

>NO09G03760.1 ID=NO09G03760.1|Name=NO09G03760.1|organism=Nannochloropsis oceanica|type=CDS|length=948bp|location=Sequence derived from alignment at chr9:1081102..1082720+ (Nannochloropsis oceanica)
ATGGTGCACGGTGGAGGGGTCCACACCGGCCACTACTCGGCCTATATCAA
GGATACGATTCACGCGGGCGGGCGCTGGTTCCTCTTCGATGACGCTCTTG
TGCTCCCCGTCCGACCCGCCACAGTGCTTCGGGCCTGGGGCGGGGAGGGC
GGGGGGGCGGAAGGGGCTGGGAGTAGAGGGAGCGATCCTCTCTTCTCCTC
TTTCCCCTCCTCCTCCTCCTCCTCCTCCTCCTGGCGCAATTCTTCTCATA
CTCTATACAAAAGTGGGAAGGGCCGGGAAGAGGAGAAGACTTTCCTCTTC
CAGCAGCAGCAGCAGGAGCTTGAAGAGGAGGATGAGTGGTGGAGGGAGGG
AGGGCTGGAGGGAGGGGTGAAGCCCACCTCTTCCTTCTTCCCCAACGCGG
TGGCTTACATGCTAGTATACAGGAAGATGGAAGCCGTCGGCAGCTCTCCC
TCGGCCCCTCCCTCCTTCCCGTCCTCCCCTTCCTCCTCCTCCCCTCCTTC
ACAGACTTTGTCGCCTGCAGACGTGGAGTTGTCGATCCCCCTCCCTCCCC
ACCTCCTCTCCTGGCTCAAGGAGGAAGAGGCGGAGGAAGCGAGGAAGGAA
GAGGCGCGTCGCCTCCGCTCTCAGCTTGCGTCGGTCCGGGTATTTTGTGG
CACTATGGAGCCGAAGGAGAGGAGGAAAGAAGGGGTGGAGGTCTCCTTGC
CCAAGACGGCGACTGTAGCAGAGCTGAAGGAGCTGGCCTGGAGGGCGATG
GGCCTGGCCCATGCCGACCCTCCTGTTGCCCTCCACGACGTCCGCCTCCG
CCCTTTCTACCGTCCTCGTCCCCCCCCTCCTCCACTGCCACCTCCCCCCC
TTCCCTTGTCGTGTCGCACTGGACGAGGGGATGACGCTGAAAGAGTGCGG
GCTGAGGACGGGCTGCGGTTTGTACCTACAAGTCAAGCGCCCCGGTGA
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Synonyms
Publications