NO09G00210.1, NO09G00210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO09G00210.1
Unique NameNO09G00210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1596
Alignment locationchr9:113287..116226 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:113287..116226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G00210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G00210NO09G00210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO09G00210.1NO09G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO09G00210.1.cds1NO09G00210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00210.1.cds2NO09G00210.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00210.1.cds3NO09G00210.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00210.1.cds4NO09G00210.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO09G00210.1.cds5NO09G00210.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO09G00210.1 ID=NO09G00210.1|Name=NO09G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1596bp
ATGGATGACCAAGCCAAGGCGGAGGCCATGAAACGGGCCAGGAGCATTGT
GGCCTCTCTTGGCATAAAGCTTTCCCGTCCCGCCCAACCTGCCTCTGCCC
CCACTCCCTCCACTACCGCCAGGTCTGTCCTTCACTCCGCTGCCCCTCCC
ACCACCAGCACCGTAGCTGCCTCTGCTCCGAGCAACAATTACCATAAAGA
GGAGGAAGAGCAGGAGGGTGCTGCCACCACCTCCTCTTCCTGCTCCTCAT
CCTACCTTTCTTCGGGCGCAGCTGCGATGCAACATGCCATAACCCCCTCT
CCTGTCTCTACGGGTCATCACAAGCCTTTACCCCCCCCGGAATCGGTCCT
TGAGAAAGTACAAAAGGTCCAAGAGAAATTGAAGGAGAGTCACGCGGCGT
TTGAGAAGGGAAGGTCGTGTATAGATCAGTCCGAACGCGATCGTCTCGCT
CAAGCCAAGGCCAGGAACATGGCTTTCTTACGATCAAAATTGCAGGAGGA
GCGTACCAAGAAATATGGTTTCGACAAGGAGGGAGGCGGGGAGGGAGGGA
AGGAGGGCGGAGGGAGAGGGAGGCGTCGGTCACAATCCCGTTCTCGGTCT
CGGTCTCGGTCTCGGTCTCGGTCTCGGTCTCGGTCTCCGCGCTGGAAAGG
AGGGAAAAGGCAAGGAGATAGAGATGGTGGTAGAGGGTGGGGAGGAGGAA
GGGAGGGGAAGAAGAGGGCAAGGATGGCAGGCCTGGGTGCGACTACTGTG
AGCGAGACAGAGAGCAATTCGGTGTATGTGGCGGGTTTACCGGCACAGGC
GACCTGGGATCACTTAGATTTATCGCGACGCCCACGGGAAGCCCAAGGGA
GATGCCCTCATTACATACGCCAAGCCCGGCTCTGCCACCGCTGCTATAAA
GAAGCTCAACGGGCATGTAATTGCGCCACAGCATTCTCTCGTCCTGAGCA
AGGCCGATTTCTCCTACAAAGAAGAAGGGAACAACGTACACGAAGGACTC
GGCTTCGACGATCACCTCGCCCATCCTGCGCAGGAGGAAGACGAGCAAGA
GGACTACGAGGTGCTCCCTCCGGAATGTGAAGCAGACAAATTCCCAGTGG
TCATCCTCCGTAACGTGTACGATCCTGATGAAACGGCGGAGGAAGTCTTC
GCTGACCTCGAGGCTGACATGCTACAAGAATGTGTACGCCACGGCGAGGT
GAAAAAAATCCTCTCTCCCGAAGGCGACTACTATGCGGGCTGCGTGGCCG
TCGTCTTCGCTACCTTCGATGCAGCTCATGCCTGCGCCAAGGCCATGCAT
GGCCGATTTTTTGACGGGCGACAGATCGAGGTGGAGATGCAAGGGAAGGT
GGAAACAAACAAGGTGATTGGGACGAGGATTGGAGGAGGGGAGGAAAGGG
AGCAGGGTAGGCAGGGGGAGAAGAGGGAGGGGAAGGAAGAAGAAAATGTG
GAGGGGGGCGAGGGGGTGGAAGTTTTCTTGAAGTCCTTAGAAGGGTAACC
TGGCTCAATGACTACTTCGGGGAAAGGGAGAGAAGAAGGGAGGGAGGAAA
GGCAGACAAGCAAAAGAAAAAGCAACGACAACTAAAAAAGTGATAT
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protein sequence of NO09G00210.1

>NO09G00210.1-protein ID=NO09G00210.1-protein|Name=NO09G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MDDQAKAEAMKRARSIVASLGIKLSRPAQPASAPTPSTTARSVLHSAAPP
TTSTVAASAPSNNYHKEEEEQEGAATTSSSCSSSYLSSGAAAMQHAITPS
PVSTGHHKPLPPPESVLEKVQKVQEKLKESHAAFEKGRSCIDQSERDRLA
QAKARNMAFLRSKLQEERTKKYGFDKEGGGEGGKEGGGRGRRRSQSRSRS
RSRSRSRSRSRSPRWKGGKRQGDRDGGRGWGGGREGKKRARMAGLGATTV
SETESNSVYVAGLPAQATWDHLDLSRRPREAQGRCPHYIRQARLCHRCYK
EAQRACNCATAFSRPEQGRFLLQRRREQRTRRTRLRRSPRPSCAGGRRAR
GLRGAPSGM*
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mRNA from alignment at chr9:113287..116226-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO09G00210.1 ID=NO09G00210.1|Name=NO09G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=2940bp|location=Sequence derived from alignment at chr9:113287..116226- (Nannochloropsis oceanica)
ATGGATGACCAAGCCAAGGCGGAGGCCATGAAACGGGCCAGGAGCATTGT
GGCCTCTCTTGGCATAAAGCTTTCCCGTCCCGCCCAACCTGCCTCTGCCC
CCACTCCCTCCACTACCGCCAGGTCTGTCCTTCACTCCGCTGCCCCTCCC
ACCACCAGCACCGTAGCTGCCTCTGCTCCGAGCAACAATTACCATAAAGA
GGAGGAAGAGCAGGAGGGTGCTGCCACCACCTCCTCTTCCTGCTCCTCAT
CCTACCTTTCTTCGGGCGCAGCTGCGATGCAACATGCCATAACCCCCTCT
CCTGTCTCTACGGGTCATCACAAGCCTTTACCCCCCCCGGAATCGGTCCT
TGAGAAAGTACAAAAGGTCCAAGAGAAATTGAAGGAGAGTCACGCGGCGT
TTGAGAAGGGAAGGTCGTGTATAGATCAGGTAGGGAGGAAGGGAGGGGAG
GACGGAGGGGCGGAGGAGGGAGGAAGATGGCAAGGAAGAAAAGGAGGTAC
TTGAATGTCGCTGAGATCGCTGACCAATTTTTGACCTGCCCTGCTTTCTC
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTATTCTAG
TCCGAACGCGATCGTCTCGCTCAAGCCAAGGCCAGGAACATGGCTTTCTT
ACGATCAAAATTGCAGGAGGAGCGTACCAAGAAATATGGTTTCGACAAGG
AGGGAGGCGGGGAGGGAGGGAAGGAGGGCGGAGGGAGAGGGAGGCGTCGG
TCACAATCCCGTTCTCGGTCTCGGTCTCGGTCTCGGTCTCGGTCTCGGTC
TCGGTCTCCGCGCTGGAAAGGAGGGAAAAGGCAAGGAGATAGAGATGGTG
GTAGAGGGTGGGGAGGAGGAAGGGAGGGGAAGAAGAGGGCAAGGATGGCA
GGCCTGGGTGCGACTACTGTGAGCGAGACAGAGAGCAATTCGGTGTATGT
GGCGGGTTTACCGGCACAGGCGACCTGGGATCACTTAGGTGAGAAAGCAG
GGTGAAAGGGAGGGAGGGAGGGAGGAAGGGAGGTAGGGAGGGAGAGGTAC
CTATGCATGGAAGTCATCGTATTGAATTTTATTGAATTTCTTCCCTTCCT
TCCTCCCTCCCTCCCTCCATCATTCCCTTTCCTACCGTCTATTCGTCTTC
CTCGTCCTGTCGCCGCCGTCGGCCCTCCTTTCCATACGTCCGCCCTGCAT
TCTTTCTCCATGGGTATCATCACACTCTTTTCCATCCTCTTCCTTCCTCC
CTCCCTCTCTTTCCCTCCTATTTGCCTCCTCATCTATATACTCTACACAC
ACACATATATATATATATATATATTCACTCCTCTTCCCGGAACTCATACC
TCCTTCCAAATACTTTTAAAAAAAATATTGAATAAATCAAATAACTAAAT
ATATGAATAAAACAAATAATTAAAATGTGAAAAAACAAATATAAAGACGC
CCTTTTTGCTCCCTATGGCCATCTGCGCCGCATCAAGATTTATCGCGACG
CCCACGGGAAGCCCAAGGGAGATGCCCTCATTACATACGCCAAGCCCGGC
TCTGCCACCGCTGCTATAAAGAAGGTAACTCCCTACATTCCTACCTTCCT
CTACCCTTATTTGTGTGTACATATTTTTGATTAAAGAAATCATTATTTAT
GTATTCGTCTATTCACACAAACACACACACCACCCATGCGTCTGTCAATA
GCTCAACGGGCATGTAATTGCGCCACAGCATTCTCTCGTCCTGAGCAAGG
CCGATTTCTCCTACAAAGAAGAAGGGAACAACGTACACGAAGGACTCGGC
TTCGACGATCACCTCGCCCATCCTGCGCAGGAGGAAGACGAGCAAGAGGA
CTACGAGGTGCTCCCTCCGGAATGTAAGTATTTATTTCTTTCCCTTCCTC
CCTCCCTCCCACGCACCCTTCTGTCCCTCATTCCTCGTGTTTTGGTTGTT
ATTGTTACAGTGCTCAGTGCAGATCCCAATTGATGGGAAATATGTATCGA
ACAACTGTATAATAAATTATTTTATAAATAAATTATTTTATAAATTGTTC
GAGTGGGTGAATGAATGAATCAATATATACATGATCGAATGCATGAAACA
AATGAATAGATAAAATAATTCAGTAAAATCAAATAAATCCACAAAATAAA
TATATGAAAGTGGAAAAAATATATAAAATGGAAAAAGAGATGTGAAAAAT
ATAACAAATGAATAAAATAATTTATCAAATGTGGTGAAAGAAAACATAGG
TAAATACACACATATTGAATATCATAGAAGCCAAAATACGATCACCTAAT
TTATGCTTTTCTTCATTTTTCTCTTGACAGGTGAAGCAGACAAATTCCCA
GTGGTCATCCTCCGTAACGTGTACGATCCTGATGAAACGGCGGAGGAAGT
CTTCGCTGACCTCGAGGCTGACATGCTACAAGAATGTGTACGCCACGGGT
ATGCAAGCACTCCTTTCCTTTCCTCCCTTCTCTCCTCGCCCTCCCTTCTG
TTCATTGTTCTCTTTTCCACCCTTCCCCCCCTACGCAGCGAGGTGAAAAA
AATCCTCTCTCCCGAAGGCGACTACTATGCGGGCTGCGTGGCCGTCGTCT
TCGCTACCTTCGATGCAGCTCATGCCTGCGCCAAGGCCATGCATGGCCGA
TTTTTTGACGGGCGACAGATCGAGGTGGAGATGCAAGGGAAGGTGGAAAC
AAACAAGGTGATTGGGACGAGGATTGGAGGAGGGGAGGAAAGGGAGCAGG
GTAGGCAGGGGGAGAAGAGGGAGGGGAAGGAAGAAGAAAATGTGGAGGGG
GGCGAGGGGGTGGAAGTTTTCTTGAAGTCCTTAGAAGGGTAACCTGGCTC
AATGACTACTTCGGGGAAAGGGAGAGAAGAAGGGAGGGAGGAAAGGCAGA
CAAGCAAAAGAAAAAGCAACGACAACTAAAAAAGTGATAT
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Coding sequence (CDS) from alignment at chr9:113287..116226-

>NO09G00210.1 ID=NO09G00210.1|Name=NO09G00210.1|organism=Nannochloropsis oceanica|type=CDS|length=1080bp|location=Sequence derived from alignment at chr9:113287..116226- (Nannochloropsis oceanica)
ATGGATGACCAAGCCAAGGCGGAGGCCATGAAACGGGCCAGGAGCATTGT
GGCCTCTCTTGGCATAAAGCTTTCCCGTCCCGCCCAACCTGCCTCTGCCC
CCACTCCCTCCACTACCGCCAGGTCTGTCCTTCACTCCGCTGCCCCTCCC
ACCACCAGCACCGTAGCTGCCTCTGCTCCGAGCAACAATTACCATAAAGA
GGAGGAAGAGCAGGAGGGTGCTGCCACCACCTCCTCTTCCTGCTCCTCAT
CCTACCTTTCTTCGGGCGCAGCTGCGATGCAACATGCCATAACCCCCTCT
CCTGTCTCTACGGGTCATCACAAGCCTTTACCCCCCCCGGAATCGGTCCT
TGAGAAAGTACAAAAGGTCCAAGAGAAATTGAAGGAGAGTCACGCGGCGT
TTGAGAAGGGAAGGTCGTGTATAGATCAGTCCGAACGCGATCGTCTCGCT
CAAGCCAAGGCCAGGAACATGGCTTTCTTACGATCAAAATTGCAGGAGGA
GCGTACCAAGAAATATGGTTTCGACAAGGAGGGAGGCGGGGAGGGAGGGA
AGGAGGGCGGAGGGAGAGGGAGGCGTCGGTCACAATCCCGTTCTCGGTCT
CGGTCTCGGTCTCGGTCTCGGTCTCGGTCTCGGTCTCCGCGCTGGAAAGG
AGGGAAAAGGCAAGGAGATAGAGATGGTGGTAGAGGGTGGGGAGGAGGAA
GGGAGGGGAAGAAGAGGGCAAGGATGGCAGGCCTGGGTGCGACTACTGTG
AGCGAGACAGAGAGCAATTCGGTGTATGTGGCGGGTTTACCGGCACAGGC
GACCTGGGATCACTTAGATTTATCGCGACGCCCACGGGAAGCCCAAGGGA
GATGCCCTCATTACATACGCCAAGCCCGGCTCTGCCACCGCTGCTATAAA
GAAGCTCAACGGGCATGTAATTGCGCCACAGCATTCTCTCGTCCTGAGCA
AGGCCGATTTCTCCTACAAAGAAGAAGGGAACAACGTACACGAAGGACTC
GGCTTCGACGATCACCTCGCCCATCCTGCGCAGGAGGAAGACGAGCAAGA
GGACTACGAGGTGCTCCCTCCGGAATGTGA
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Synonyms
Publications