NO08G00330.1, NO08G00330.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00330.1
Unique NameNO08G00330.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1761
Alignment locationchr8:131998..133758 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:131998..133758 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G00330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00330NO08G00330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00330.1NO08G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00330.1.cds1NO08G00330.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00330.1 ID=NO08G00330.1|Name=NO08G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=1761bp
CGGAAAACCTCAAGCTTCCCTCTATTAATGCACCATGAAACGCCTCGGGT
TTGAAATGCCGGAGTTGAACCCACCGTTTCACCAAACGCACGCGTTTTTC
GATGGACTTTGCAACCAGCAAATCGTCGGTCATGTACCCTCTCAAGGGAG
GATAATGTAATAAATATCTACAGAGAGAGTAAATCTTCTTAGAGTGATGT
TCTGCTGCTGCTATCTAGGCGTTGCATTTCCCCGTCTGAGCCAGTTTACC
TTGCTCCTTATACACCCCCTCCACTACAACTACACATCGACAATTCCACT
ACCTACAGGATGCTATCGTCAGCACAGGACGGCAGCGATGAGTACTCCCT
GCTGGAAAAGAATGATGTTATAGGGTCGTCTACGTTCTGCATTTCCGGTT
CATCTTTTTACCACACCAATTCTGAAAGCCTGCAGCACACACCCGATCTC
TGTGCTCCTGTCGAGGCCTCTCCGCTACCTGCGGCTGTCCGTCTACGAAA
TTGCCTACATTCCAGCCTACAAAACCGCTATTTTTGGGCAAATCTTGTCT
ATTTGTTTTACTGTACATGCATGCTCTGCGTCGATTTCGTCGATTACGGC
AAGGAAACTAATGACAAGCTGTACTACTTCTTTGGCATGGTCCACTTCCT
CAACGCGTGGATGTATTGGTACGCCTGGAAAGACGTTCGGTGGCGGGACC
CAATCTTATATCCAGAATATTTAAATGTCGTCGGTGCAGCCCTTTACCTG
TGGTCATCCAGCCTCTACCGCCGCGAGTCCGGCCCGCACGACGCCGCCAC
CTCCCACATTCACGTCATTGAGACCTGTGCGGCGATCGTCGAGTTGCTCG
CCTGCGTCGGATGGGCCTTCACGTGGCATCTGACCTATGAACGCGTCCCA
GGGCGAGGCTATACATTGGATGATCCTGACGTGTGGGCATTGCTGACGAT
ATTTGCTGCAGCCATTACGTATGTAGTGTATAACTTGCAGATCCTGGCGC
ACCCCGATTGGTACAGCGACAATGAGGTGTATTTTTTGGGTGACATTTCC
TATGCGATGAATGGGGTGCTCTATTTATTGGCAGGGCTGAGGGATGACGG
ATGGTTTTGGTGGATGCCCTTAATGGGAAATTTCTACACCTTTGCTCCAT
CTTCCTCTTCCCCTTCATCGATGGGTGTGGAGGCGCAGGAAGAGGAGATG
AAATCTCCCTTGCTGGCTGTGGTGGTTAGAAGAGAGAAAGTGGAAAAGAA
AGAGCGGCAGAATCAAATTTGGAACGCATGGGGCATGCCGCGGAAAAAGA
TTCAAGGGTTCGGGATGATAGAAGAGAGTGGTACCAGAGGAGCAATTGCT
TAAGGGAAGAAGCACGGACATGTCTGTCATTGTCGTTACCGGAATTACAC
CAGAGAAGAAAAACGAGGAAAAATGTAGAGATCTATAATGATTAAGAATG
GGAGAGAGTAGGTATTGATGCATGTATAAGTCATCTCCCAACCCCCGTGG
TGAGGGTGGGTTGGTGAGGAGAAGAAATAGAATTGAGTAATGCATACAAC
GAGCCTTGGAGGCTTTGGTGTGTGAGAGCAAGCACGAGGAGGGCAGCTGC
AATAAGTAGGTAGGGAGATGGAAGAAGAGAAAATGCTGGGAGTAAAACTC
CTTTTGCTTGTTCCTCACGCAGTATGACTCAAATGTGAGTACCAAATGAT
GCATCCGGGCACAGCTTGCGTAAATGAATATAGCAAAGCAATGGATACGA
AGTTAATTTCA
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protein sequence of NO08G00330.1

>NO08G00330.1-protein ID=NO08G00330.1-protein|Name=NO08G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bp
MLSSAQDGSDEYSLLEKNDVIGSSTFCISGSSFYHTNSESLQHTPDLCAP
VEASPLPAAVRLRNCLHSSLQNRYFWANLVYLFYCTCMLCVDFVDYGKET
NDKLYYFFGMVHFLNAWMYWYAWKDVRWRDPILYPEYLNVVGAALYLWSS
SLYRRESGPHDAATSHIHVIETCAAIVELLACVGWAFTWHLTYERVPGRG
YTLDDPDVWALLTIFAAAITYVVYNLQILAHPDWYSDNEVYFLGDISYAM
NGVLYLLAGLRDDGWFWWMPLMGNFYTFAPSSSSPSSMGVEAQEEEMKSP
LLAVVVRREKVEKKERQNQIWNAWGMPRKKIQGFGMIEESGTRGAIA*
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mRNA from alignment at chr8:131998..133758+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00330.1 ID=NO08G00330.1|Name=NO08G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=1761bp|location=Sequence derived from alignment at chr8:131998..133758+ (Nannochloropsis oceanica)
CGGAAAACCTCAAGCTTCCCTCTATTAATGCACCATGAAACGCCTCGGGT
TTGAAATGCCGGAGTTGAACCCACCGTTTCACCAAACGCACGCGTTTTTC
GATGGACTTTGCAACCAGCAAATCGTCGGTCATGTACCCTCTCAAGGGAG
GATAATGTAATAAATATCTACAGAGAGAGTAAATCTTCTTAGAGTGATGT
TCTGCTGCTGCTATCTAGGCGTTGCATTTCCCCGTCTGAGCCAGTTTACC
TTGCTCCTTATACACCCCCTCCACTACAACTACACATCGACAATTCCACT
ACCTACAGGATGCTATCGTCAGCACAGGACGGCAGCGATGAGTACTCCCT
GCTGGAAAAGAATGATGTTATAGGGTCGTCTACGTTCTGCATTTCCGGTT
CATCTTTTTACCACACCAATTCTGAAAGCCTGCAGCACACACCCGATCTC
TGTGCTCCTGTCGAGGCCTCTCCGCTACCTGCGGCTGTCCGTCTACGAAA
TTGCCTACATTCCAGCCTACAAAACCGCTATTTTTGGGCAAATCTTGTCT
ATTTGTTTTACTGTACATGCATGCTCTGCGTCGATTTCGTCGATTACGGC
AAGGAAACTAATGACAAGCTGTACTACTTCTTTGGCATGGTCCACTTCCT
CAACGCGTGGATGTATTGGTACGCCTGGAAAGACGTTCGGTGGCGGGACC
CAATCTTATATCCAGAATATTTAAATGTCGTCGGTGCAGCCCTTTACCTG
TGGTCATCCAGCCTCTACCGCCGCGAGTCCGGCCCGCACGACGCCGCCAC
CTCCCACATTCACGTCATTGAGACCTGTGCGGCGATCGTCGAGTTGCTCG
CCTGCGTCGGATGGGCCTTCACGTGGCATCTGACCTATGAACGCGTCCCA
GGGCGAGGCTATACATTGGATGATCCTGACGTGTGGGCATTGCTGACGAT
ATTTGCTGCAGCCATTACGTATGTAGTGTATAACTTGCAGATCCTGGCGC
ACCCCGATTGGTACAGCGACAATGAGGTGTATTTTTTGGGTGACATTTCC
TATGCGATGAATGGGGTGCTCTATTTATTGGCAGGGCTGAGGGATGACGG
ATGGTTTTGGTGGATGCCCTTAATGGGAAATTTCTACACCTTTGCTCCAT
CTTCCTCTTCCCCTTCATCGATGGGTGTGGAGGCGCAGGAAGAGGAGATG
AAATCTCCCTTGCTGGCTGTGGTGGTTAGAAGAGAGAAAGTGGAAAAGAA
AGAGCGGCAGAATCAAATTTGGAACGCATGGGGCATGCCGCGGAAAAAGA
TTCAAGGGTTCGGGATGATAGAAGAGAGTGGTACCAGAGGAGCAATTGCT
TAAGGGAAGAAGCACGGACATGTCTGTCATTGTCGTTACCGGAATTACAC
CAGAGAAGAAAAACGAGGAAAAATGTAGAGATCTATAATGATTAAGAATG
GGAGAGAGTAGGTATTGATGCATGTATAAGTCATCTCCCAACCCCCGTGG
TGAGGGTGGGTTGGTGAGGAGAAGAAATAGAATTGAGTAATGCATACAAC
GAGCCTTGGAGGCTTTGGTGTGTGAGAGCAAGCACGAGGAGGGCAGCTGC
AATAAGTAGGTAGGGAGATGGAAGAAGAGAAAATGCTGGGAGTAAAACTC
CTTTTGCTTGTTCCTCACGCAGTATGACTCAAATGTGAGTACCAAATGAT
GCATCCGGGCACAGCTTGCGTAAATGAATATAGCAAAGCAATGGATACGA
AGTTAATTTCA
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Coding sequence (CDS) from alignment at chr8:131998..133758+

>NO08G00330.1 ID=NO08G00330.1|Name=NO08G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=1044bp|location=Sequence derived from alignment at chr8:131998..133758+ (Nannochloropsis oceanica)
ATGCTATCGTCAGCACAGGACGGCAGCGATGAGTACTCCCTGCTGGAAAA
GAATGATGTTATAGGGTCGTCTACGTTCTGCATTTCCGGTTCATCTTTTT
ACCACACCAATTCTGAAAGCCTGCAGCACACACCCGATCTCTGTGCTCCT
GTCGAGGCCTCTCCGCTACCTGCGGCTGTCCGTCTACGAAATTGCCTACA
TTCCAGCCTACAAAACCGCTATTTTTGGGCAAATCTTGTCTATTTGTTTT
ACTGTACATGCATGCTCTGCGTCGATTTCGTCGATTACGGCAAGGAAACT
AATGACAAGCTGTACTACTTCTTTGGCATGGTCCACTTCCTCAACGCGTG
GATGTATTGGTACGCCTGGAAAGACGTTCGGTGGCGGGACCCAATCTTAT
ATCCAGAATATTTAAATGTCGTCGGTGCAGCCCTTTACCTGTGGTCATCC
AGCCTCTACCGCCGCGAGTCCGGCCCGCACGACGCCGCCACCTCCCACAT
TCACGTCATTGAGACCTGTGCGGCGATCGTCGAGTTGCTCGCCTGCGTCG
GATGGGCCTTCACGTGGCATCTGACCTATGAACGCGTCCCAGGGCGAGGC
TATACATTGGATGATCCTGACGTGTGGGCATTGCTGACGATATTTGCTGC
AGCCATTACGTATGTAGTGTATAACTTGCAGATCCTGGCGCACCCCGATT
GGTACAGCGACAATGAGGTGTATTTTTTGGGTGACATTTCCTATGCGATG
AATGGGGTGCTCTATTTATTGGCAGGGCTGAGGGATGACGGATGGTTTTG
GTGGATGCCCTTAATGGGAAATTTCTACACCTTTGCTCCATCTTCCTCTT
CCCCTTCATCGATGGGTGTGGAGGCGCAGGAAGAGGAGATGAAATCTCCC
TTGCTGGCTGTGGTGGTTAGAAGAGAGAAAGTGGAAAAGAAAGAGCGGCA
GAATCAAATTTGGAACGCATGGGGCATGCCGCGGAAAAAGATTCAAGGGT
TCGGGATGATAGAAGAGAGTGGTACCAGAGGAGCAATTGCTTAA
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Synonyms
Publications