NO02G06170.1, NO02G06170.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G06170.1
Unique NameNO02G06170.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1365
Alignment locationchr2:1652640..1654317 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:1652640..1654317 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G06170.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G06170NO02G06170Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G06170.1NO02G06170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G06170.1.cds1NO02G06170.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06170.1.cds2NO02G06170.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G06170.1.cds3NO02G06170.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G06170.1 ID=NO02G06170.1|Name=NO02G06170.1|organism=Nannochloropsis oceanica|type=mRNA|length=1365bp
ATGCGTAGGGGAAGCTTCAACCAATATCAGGAAATTTTCTGCCACCACAT
GCTGCGACAGAGTTTAATGGACGCACAACCAGAGCCGCTGCTACCGAGAA
TCCATCTCGTTGGCGGGGTCAAGTCTCTTGCTCCGAATACCACCACGGCC
GCCAAAACACATGTCACGGATTTTCGAAGCGTGAAGCAGGCGACAGGACT
TGGATTAGACAAGAATAAAGGCGGGTTGATAGTCTTTGGGCATGGTCACG
ATGCGCCGCTACCTCCTCCCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAACCGGACAAGGCACTCTCCAAGAAGCGCCCTCGTCAACAGCA
GCAACACCAACAACAACAAGAAAGAGAACAAGAACAAGCTTTCGATACTG
GAAACGACGTGGACAGGCGATTAAAACCCAATGCGGACGCTCTGAAACGA
ATCATAGGGAGAGTAGAAGGGCACAACCAGAGGGTTCTGGCCGATGCTGT
CGAACGAAGCCAGGACGGGACTGTGGAGCGATTAGTGGCCTTGAACGGCG
CAAAGGAGATTCTCCGCCTGGCGCGCTCTTACGACATCGGCATCTTGTTC
TCGGACACCTCTTTGGGGGCAGCGGCTGCGCAGGCCTTGGCTGAGGAAGG
AAGGGTGGGCGAGAAGGAGGGGAGGAGGGCGAAGGGAAGTAATGGTACAC
CGTTTCCTGTCCTTGGCAGGATGCTGGGTCCCGAGGTCACAAACGACGAG
AAGGAGGGAGAGAGGATGGGAGGGAGGGCGGTGCAACTGCCGGTAGGGGT
AATCGAGAGGGAGCCGAAGAGGAAGGAGGAGAAAATGACTGGTGGTAGTA
GTACGGGAGGAGAAGGAGGCAGCAAATTATTCGGCCGGGCTTTTGCGGCA
GCCCTTGGAGGAAGGGAAGAGAGAGGAGGAGGAGAAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCATCAGAGGGGA
GTAGAGAAAAGCATGTTAGACATGTAAAAATAGAAGCAGCAGCAGTAGCA
CTACCGTTTGCAGGAGTAGAAACAGCAGCATCACAATCATCAGGAACAAC
AAGTGTAATACCAACTGCAGCAGCAGCAGCAGCAGAAGTCGAAGCAACAG
GGGTAGAAGGAAGGCACAAAAGACAACGGGTCGTCATTGCACGTGGAAGC
GATGGAGGGAGGGGAGGTGAAGGGGCAGGGGCAGGGGCAGCGAGGGGCTT
CAAGGCCGCACTAACTGGCATTTTCTCAAAGGGGGGGATAGGTGGTGGGA
GAGGGAGATTGAGAGGGCCACGTGAAGCGGCAGCATCAGGAGGACCTGGA
GGAGGGAAGGGTTGA
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protein sequence of NO02G06170.1

>NO02G06170.1-protein ID=NO02G06170.1-protein|Name=NO02G06170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=455bp
MRRGSFNQYQEIFCHHMLRQSLMDAQPEPLLPRIHLVGGVKSLAPNTTTA
AKTHVTDFRSVKQATGLGLDKNKGGLIVFGHGHDAPLPPPLQQQQQQQQQ
QQQPDKALSKKRPRQQQQHQQQQEREQEQAFDTGNDVDRRLKPNADALKR
IIGRVEGHNQRVLADAVERSQDGTVERLVALNGAKEILRLARSYDIGILF
SDTSLGAAAAQALAEEGRVGEKEGRRAKGSNGTPFPVLGRMLGPEVTNDE
KEGERMGGRAVQLPVGVIEREPKRKEEKMTGGSSTGGEGGSKLFGRAFAA
ALGGREERGGGEGGGGGGGGGGGGGGGGGASEGSREKHVRHVKIEAAAVA
LPFAGVETAASQSSGTTSVIPTAAAAAAEVEATGVEGRHKRQRVVIARGS
DGGRGGEGAGAGAARGFKAALTGIFSKGGIGGGRGRLRGPREAAASGGPG
GGKG*
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mRNA from alignment at chr2:1652640..1654317-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G06170.1 ID=NO02G06170.1|Name=NO02G06170.1|organism=Nannochloropsis oceanica|type=mRNA|length=1678bp|location=Sequence derived from alignment at chr2:1652640..1654317- (Nannochloropsis oceanica)
ATGCGTAGGGGAAGCTTCAACCAATATCAGGAAATTTTCTGCCACCACAT
GCTGCGACAGAGTTTAATGGACGCACAACCAGAGCCGCTGCTACCGAGAA
TCCATCTCGTTGGCGGGGTCAAGTCTCTTGCTCCGAATACCACCACGGCC
GCCAAAACACATGTCACGGATTTTCGAAGCGTGAAGCAGGCGACAGGACT
TGGATTAGACAAGAATAAAGGCGGGTTGATAGTCTTTGGGCATGGTCACG
ATGCGCCGCTACCTCCTCCCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAACCGGACAAGGCACTCTCCAAGAAGCGCCCTCGTCAACAGCA
GCAACACCAACAACAACAAGAAAGAGAACAAGAACAAGCTTTCGATACTG
GAAACGACGTGGACAGGTACGCTAAATGAGTCTTACATGTATATACAGAC
GCATGCGGCTCGATACTGCCCTACTCTTCCTGCCACGGCTCAAACACCCC
ACCAGGCGATTAAAACCCAATGCGGACGCTCTGAAACGAATCATAGGGAG
AGTAGAAGGGCACAACCAGAGGGTTCTGGCCGATGCTGTCGAACGAAGCC
AGGACGGGACTGTGGAGCGATTAGGTGAGGGAGGGAGGGAGGGAGGAAGG
GAAGAAGTGGGAGGAGAAAGAACGAAAGATGGGAGACTAGGCTATCCTTT
TATTATAAGGAGTTCATGTTGGAAAGAGGCATGTCACCCTGGCCTTGAAT
TCTCCAACGGCTTCCGCGTCTTTTTTCCACAAACATTCATCCTCCCTCAT
TCCCTCCCTTCCTCCCCCCTTCCTCCCTCCCTTCCCTTCACCAATTAGTG
GCCTTGAACGGCGCAAAGGAGATTCTCCGCCTGGCGCGCTCTTACGACAT
CGGCATCTTGTTCTCGGACACCTCTTTGGGGGCAGCGGCTGCGCAGGCCT
TGGCTGAGGAAGGAAGGGTGGGCGAGAAGGAGGGGAGGAGGGCGAAGGGA
AGTAATGGTACACCGTTTCCTGTCCTTGGCAGGATGCTGGGTCCCGAGGT
CACAAACGACGAGAAGGAGGGAGAGAGGATGGGAGGGAGGGCGGTGCAAC
TGCCGGTAGGGGTAATCGAGAGGGAGCCGAAGAGGAAGGAGGAGAAAATG
ACTGGTGGTAGTAGTACGGGAGGAGAAGGAGGCAGCAAATTATTCGGCCG
GGCTTTTGCGGCAGCCCTTGGAGGAAGGGAAGAGAGAGGAGGAGGAGAAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GCATCAGAGGGGAGTAGAGAAAAGCATGTTAGACATGTAAAAATAGAAGC
AGCAGCAGTAGCACTACCGTTTGCAGGAGTAGAAACAGCAGCATCACAAT
CATCAGGAACAACAAGTGTAATACCAACTGCAGCAGCAGCAGCAGCAGAA
GTCGAAGCAACAGGGGTAGAAGGAAGGCACAAAAGACAACGGGTCGTCAT
TGCACGTGGAAGCGATGGAGGGAGGGGAGGTGAAGGGGCAGGGGCAGGGG
CAGCGAGGGGCTTCAAGGCCGCACTAACTGGCATTTTCTCAAAGGGGGGG
ATAGGTGGTGGGAGAGGGAGATTGAGAGGGCCACGTGAAGCGGCAGCATC
AGGAGGACCTGGAGGAGGGAAGGGTTGA
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Coding sequence (CDS) from alignment at chr2:1652640..1654317-

>NO02G06170.1 ID=NO02G06170.1|Name=NO02G06170.1|organism=Nannochloropsis oceanica|type=CDS|length=1365bp|location=Sequence derived from alignment at chr2:1652640..1654317- (Nannochloropsis oceanica)
ATGCGTAGGGGAAGCTTCAACCAATATCAGGAAATTTTCTGCCACCACAT
GCTGCGACAGAGTTTAATGGACGCACAACCAGAGCCGCTGCTACCGAGAA
TCCATCTCGTTGGCGGGGTCAAGTCTCTTGCTCCGAATACCACCACGGCC
GCCAAAACACATGTCACGGATTTTCGAAGCGTGAAGCAGGCGACAGGACT
TGGATTAGACAAGAATAAAGGCGGGTTGATAGTCTTTGGGCATGGTCACG
ATGCGCCGCTACCTCCTCCCCTCCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAACCGGACAAGGCACTCTCCAAGAAGCGCCCTCGTCAACAGCA
GCAACACCAACAACAACAAGAAAGAGAACAAGAACAAGCTTTCGATACTG
GAAACGACGTGGACAGGCGATTAAAACCCAATGCGGACGCTCTGAAACGA
ATCATAGGGAGAGTAGAAGGGCACAACCAGAGGGTTCTGGCCGATGCTGT
CGAACGAAGCCAGGACGGGACTGTGGAGCGATTAGTGGCCTTGAACGGCG
CAAAGGAGATTCTCCGCCTGGCGCGCTCTTACGACATCGGCATCTTGTTC
TCGGACACCTCTTTGGGGGCAGCGGCTGCGCAGGCCTTGGCTGAGGAAGG
AAGGGTGGGCGAGAAGGAGGGGAGGAGGGCGAAGGGAAGTAATGGTACAC
CGTTTCCTGTCCTTGGCAGGATGCTGGGTCCCGAGGTCACAAACGACGAG
AAGGAGGGAGAGAGGATGGGAGGGAGGGCGGTGCAACTGCCGGTAGGGGT
AATCGAGAGGGAGCCGAAGAGGAAGGAGGAGAAAATGACTGGTGGTAGTA
GTACGGGAGGAGAAGGAGGCAGCAAATTATTCGGCCGGGCTTTTGCGGCA
GCCCTTGGAGGAAGGGAAGAGAGAGGAGGAGGAGAAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCATCAGAGGGGA
GTAGAGAAAAGCATGTTAGACATGTAAAAATAGAAGCAGCAGCAGTAGCA
CTACCGTTTGCAGGAGTAGAAACAGCAGCATCACAATCATCAGGAACAAC
AAGTGTAATACCAACTGCAGCAGCAGCAGCAGCAGAAGTCGAAGCAACAG
GGGTAGAAGGAAGGCACAAAAGACAACGGGTCGTCATTGCACGTGGAAGC
GATGGAGGGAGGGGAGGTGAAGGGGCAGGGGCAGGGGCAGCGAGGGGCTT
CAAGGCCGCACTAACTGGCATTTTCTCAAAGGGGGGGATAGGTGGTGGGA
GAGGGAGATTGAGAGGGCCACGTGAAGCGGCAGCATCAGGAGGACCTGGA
GGAGGGAAGGGTTGA
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Synonyms
Publications