NO01G03870.1, NO01G03870.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G03870.1
Unique NameNO01G03870.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1926
Alignment locationchr1:1034131..1036402 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1034131..1036402 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G03870.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03870NO01G03870Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G03870.1NO01G03870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G03870.1.cds1NO01G03870.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G03870.1.cds2NO01G03870.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G03870.1 ID=NO01G03870.1|Name=NO01G03870.1|organism=Nannochloropsis oceanica|type=mRNA|length=1926bp
ATGGAGGACTCCAATCGCACGTCTCGCAGCGCCCACACACCTGCAACGCG
TGATAACCATATGCATTTCTCACGGATGGACCGAGGATTGCTTGCTGACA
AAGATGGTGCCCTTGAGACGCACGTGCACTTGCGCCGCACCGGCAGCGTG
GATATCTTCGCCGGTCAACCCTCCCCGTCGTCGCACCACCGTCAACAGCA
GCAACAGGAGGACACGGACAGCTGTCGTGCTCACGCCAATACCGCCAGTA
CCACCACTGATCTGGTAGGCACCACCAGCAGCGGCACTACCAGATTCACT
GCCCCCTCTCCGCCACCATCGGCGTTCTCCATCTTGCCGCCAGCATACCC
TCCTTCCTCTCACCCTCCCCATCAAACCCCGACCGTGAGTAAGAGTAGTA
CCGCTGTCCTAAGTGCCCTACGTGCGCTGCAAGATAAGATTAAGCGCCTG
GAGAAAGAGCGGGCCGATGCCATTTGGGAGGTCGGCATGCTACGTCAGCA
GCTCGAGGGGGTGCAGCGTCGGGCGGAAGTTGAACGGCGGGAAGACGTGT
TGGAGCTACAAGAGCAATATTCTCACGTACAGGGTGCTTATGAGCGGCTG
TTGTCGGACAAGGAGGCAATGGAGAGCAAGCTAGTGCGCTCGGAGGAGAG
ACGTGCTGTGCTCGTCCAGGAAGCAGGTCGACTGCGTGGGCAGTTGCTTG
CGGAGGAGGAAAGCCGCCGATTAGCTAAAGTAAGGGTACGCGGGATGGGG
GCCCGGATAAGCAAAATGGAGCACGCCGTCCAGAATCGAGGCGTTAAAGC
CGAGAATACGATCGCTGAGTTGCGTGAAACATTGGAGATAGAAACGGCTC
GTCGACTTGAGCTGGAGGAACGCAATGAGAAATTTGGGGAGGTCTTACTG
TCGGTGTTGGACATGAACCAGGAAATTGCTAGGTATTATCCGGCACATGG
AACCAAGTCGCAGGGTACAGCCACCGCCACCACCAGCAGCAGCTGCTGCG
ACTATGCAGCTGCCCCGCGCACGGCTCCCAAACCCCGGTCCATTCGGACG
AGCAGCAGCAACAGCGGGGGGACCTTGCCCTTCTTGCCGGCGTCGCACCA
TCGGACATATAATCTCTTGGCCACACTCTCGCAGGCTGTGCGAGAATGCA
AGCAACGGGAGCCTAAGCGGGTGTTGGATGCTTTGTATGAGTTGGTGCAG
TTGGAAACGGGCTCGGTCATGGGGCGGGAGGAGCGCTGCGCCTTCCCTCC
CTCGGGGCAATCTGCCGGGTCTGCTTCGACCTCCTTTCCCTCCACCACTC
GGGCATGTGGTGGGCATGCGTCTCTTGCGAGGGGACGCCGTCCAACAGTT
GCTGCGGAATGTATGGAGGGGAAGCAACGACTGCAGCAGCAGCAGCAGCA
GCACGACGCGGAAGAGCATGACAAGGAGGTGATTCTGGCGATGCAAGCCG
AGTTAAAGGAACTGGAGTATGTGTTGGAAGACGAGCTACGGGTTTTAAAT
CGTAAATACGCGGGTATGGTTGAGCTGGCTCGGAGCGGGAGCAGAAGGAC
AGCTGGGTCAGGAGGAGGAAGAAAAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGA
GGAGGAGAGGAGTTTCGGGAGGAGGACTTGCGGGCATTGATTGAGGACAT
TCATCGGAAGGAGGCCGAGCTCAAGCATCTACGCCGGGCTTTGCGCTCGA
AACGAGGGCTCTGCCAATCACGGCATTACCATTACCCCACACAGCAACAA
CAGCAGCAGCAGCAGGCGTCGTGCACAAGCCCGCGGGCAAAGGGCGCCGC
ACAGCGTGTCCGAGAGCGCATGTCGCTTCTAAGTGGTATCCGGGACATGT
CCGGCTTGGCCGCAGCGGATAAATAA
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protein sequence of NO01G03870.1

>NO01G03870.1-protein ID=NO01G03870.1-protein|Name=NO01G03870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=642bp
MEDSNRTSRSAHTPATRDNHMHFSRMDRGLLADKDGALETHVHLRRTGSV
DIFAGQPSPSSHHRQQQQQEDTDSCRAHANTASTTTDLVGTTSSGTTRFT
APSPPPSAFSILPPAYPPSSHPPHQTPTVSKSSTAVLSALRALQDKIKRL
EKERADAIWEVGMLRQQLEGVQRRAEVERREDVLELQEQYSHVQGAYERL
LSDKEAMESKLVRSEERRAVLVQEAGRLRGQLLAEEESRRLAKVRVRGMG
ARISKMEHAVQNRGVKAENTIAELRETLEIETARRLELEERNEKFGEVLL
SVLDMNQEIARYYPAHGTKSQGTATATTSSSCCDYAAAPRTAPKPRSIRT
SSSNSGGTLPFLPASHHRTYNLLATLSQAVRECKQREPKRVLDALYELVQ
LETGSVMGREERCAFPPSGQSAGSASTSFPSTTRACGGHASLARGRRPTV
AAECMEGKQRLQQQQQQHDAEEHDKEVILAMQAELKELEYVLEDELRVLN
RKYAGMVELARSGSRRTAGSGGGRKGGGGGGGGGGGGGGGGGGGGGGGGG
GGEEFREEDLRALIEDIHRKEAELKHLRRALRSKRGLCQSRHYHYPTQQQ
QQQQQASCTSPRAKGAAQRVRERMSLLSGIRDMSGLAAADK*
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mRNA from alignment at chr1:1034131..1036402-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G03870.1 ID=NO01G03870.1|Name=NO01G03870.1|organism=Nannochloropsis oceanica|type=mRNA|length=2272bp|location=Sequence derived from alignment at chr1:1034131..1036402- (Nannochloropsis oceanica)
ATGGAGGACTCCAATCGCACGTCTCGCAGCGCCCACACACCTGCAACGCG
TGATAACCATATGCATTTCTCACGGATGGACCGAGGATTGCTTGCTGACA
AAGGTGTGTTGCGACCTCTCTTCCCTCCCCTGTCTTCCTTTTGTTCCAAG
TTTCTGTCACCATTGCACGCGGAGGAATCGCCATGCATCTAGAGAGCACG
TAAAAAGTGGTGATCTACTCAAAGCATACGGGAAGCAAATAGTAGTGTTA
GCCTGCCTTCACGTGTTTTAGTGTTCGTCTTCTTCGTTCATTGTGCAAGA
GCACCTTTTTCTCTTGGTCACCAGGCCAAGATGCAACTCCTCATCCCCTT
TGAATGAAAAAAGAAAGTTGCGGGCAACGCAGACATCTCTCGATCGAAGA
AAACTTTCCTTCTCTCTTCCTTTTTCCACACTGCCTTCTTACACAACAGA
TGGTGCCCTTGAGACGCACGTGCACTTGCGCCGCACCGGCAGCGTGGATA
TCTTCGCCGGTCAACCCTCCCCGTCGTCGCACCACCGTCAACAGCAGCAA
CAGGAGGACACGGACAGCTGTCGTGCTCACGCCAATACCGCCAGTACCAC
CACTGATCTGGTAGGCACCACCAGCAGCGGCACTACCAGATTCACTGCCC
CCTCTCCGCCACCATCGGCGTTCTCCATCTTGCCGCCAGCATACCCTCCT
TCCTCTCACCCTCCCCATCAAACCCCGACCGTGAGTAAGAGTAGTACCGC
TGTCCTAAGTGCCCTACGTGCGCTGCAAGATAAGATTAAGCGCCTGGAGA
AAGAGCGGGCCGATGCCATTTGGGAGGTCGGCATGCTACGTCAGCAGCTC
GAGGGGGTGCAGCGTCGGGCGGAAGTTGAACGGCGGGAAGACGTGTTGGA
GCTACAAGAGCAATATTCTCACGTACAGGGTGCTTATGAGCGGCTGTTGT
CGGACAAGGAGGCAATGGAGAGCAAGCTAGTGCGCTCGGAGGAGAGACGT
GCTGTGCTCGTCCAGGAAGCAGGTCGACTGCGTGGGCAGTTGCTTGCGGA
GGAGGAAAGCCGCCGATTAGCTAAAGTAAGGGTACGCGGGATGGGGGCCC
GGATAAGCAAAATGGAGCACGCCGTCCAGAATCGAGGCGTTAAAGCCGAG
AATACGATCGCTGAGTTGCGTGAAACATTGGAGATAGAAACGGCTCGTCG
ACTTGAGCTGGAGGAACGCAATGAGAAATTTGGGGAGGTCTTACTGTCGG
TGTTGGACATGAACCAGGAAATTGCTAGGTATTATCCGGCACATGGAACC
AAGTCGCAGGGTACAGCCACCGCCACCACCAGCAGCAGCTGCTGCGACTA
TGCAGCTGCCCCGCGCACGGCTCCCAAACCCCGGTCCATTCGGACGAGCA
GCAGCAACAGCGGGGGGACCTTGCCCTTCTTGCCGGCGTCGCACCATCGG
ACATATAATCTCTTGGCCACACTCTCGCAGGCTGTGCGAGAATGCAAGCA
ACGGGAGCCTAAGCGGGTGTTGGATGCTTTGTATGAGTTGGTGCAGTTGG
AAACGGGCTCGGTCATGGGGCGGGAGGAGCGCTGCGCCTTCCCTCCCTCG
GGGCAATCTGCCGGGTCTGCTTCGACCTCCTTTCCCTCCACCACTCGGGC
ATGTGGTGGGCATGCGTCTCTTGCGAGGGGACGCCGTCCAACAGTTGCTG
CGGAATGTATGGAGGGGAAGCAACGACTGCAGCAGCAGCAGCAGCAGCAC
GACGCGGAAGAGCATGACAAGGAGGTGATTCTGGCGATGCAAGCCGAGTT
AAAGGAACTGGAGTATGTGTTGGAAGACGAGCTACGGGTTTTAAATCGTA
AATACGCGGGTATGGTTGAGCTGGCTCGGAGCGGGAGCAGAAGGACAGCT
GGGTCAGGAGGAGGAAGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAG
GAGAGGAGTTTCGGGAGGAGGACTTGCGGGCATTGATTGAGGACATTCAT
CGGAAGGAGGCCGAGCTCAAGCATCTACGCCGGGCTTTGCGCTCGAAACG
AGGGCTCTGCCAATCACGGCATTACCATTACCCCACACAGCAACAACAGC
AGCAGCAGCAGGCGTCGTGCACAAGCCCGCGGGCAAAGGGCGCCGCACAG
CGTGTCCGAGAGCGCATGTCGCTTCTAAGTGGTATCCGGGACATGTCCGG
CTTGGCCGCAGCGGATAAATAA
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Coding sequence (CDS) from alignment at chr1:1034131..1036402-

>NO01G03870.1 ID=NO01G03870.1|Name=NO01G03870.1|organism=Nannochloropsis oceanica|type=CDS|length=1926bp|location=Sequence derived from alignment at chr1:1034131..1036402- (Nannochloropsis oceanica)
ATGGAGGACTCCAATCGCACGTCTCGCAGCGCCCACACACCTGCAACGCG
TGATAACCATATGCATTTCTCACGGATGGACCGAGGATTGCTTGCTGACA
AAGATGGTGCCCTTGAGACGCACGTGCACTTGCGCCGCACCGGCAGCGTG
GATATCTTCGCCGGTCAACCCTCCCCGTCGTCGCACCACCGTCAACAGCA
GCAACAGGAGGACACGGACAGCTGTCGTGCTCACGCCAATACCGCCAGTA
CCACCACTGATCTGGTAGGCACCACCAGCAGCGGCACTACCAGATTCACT
GCCCCCTCTCCGCCACCATCGGCGTTCTCCATCTTGCCGCCAGCATACCC
TCCTTCCTCTCACCCTCCCCATCAAACCCCGACCGTGAGTAAGAGTAGTA
CCGCTGTCCTAAGTGCCCTACGTGCGCTGCAAGATAAGATTAAGCGCCTG
GAGAAAGAGCGGGCCGATGCCATTTGGGAGGTCGGCATGCTACGTCAGCA
GCTCGAGGGGGTGCAGCGTCGGGCGGAAGTTGAACGGCGGGAAGACGTGT
TGGAGCTACAAGAGCAATATTCTCACGTACAGGGTGCTTATGAGCGGCTG
TTGTCGGACAAGGAGGCAATGGAGAGCAAGCTAGTGCGCTCGGAGGAGAG
ACGTGCTGTGCTCGTCCAGGAAGCAGGTCGACTGCGTGGGCAGTTGCTTG
CGGAGGAGGAAAGCCGCCGATTAGCTAAAGTAAGGGTACGCGGGATGGGG
GCCCGGATAAGCAAAATGGAGCACGCCGTCCAGAATCGAGGCGTTAAAGC
CGAGAATACGATCGCTGAGTTGCGTGAAACATTGGAGATAGAAACGGCTC
GTCGACTTGAGCTGGAGGAACGCAATGAGAAATTTGGGGAGGTCTTACTG
TCGGTGTTGGACATGAACCAGGAAATTGCTAGGTATTATCCGGCACATGG
AACCAAGTCGCAGGGTACAGCCACCGCCACCACCAGCAGCAGCTGCTGCG
ACTATGCAGCTGCCCCGCGCACGGCTCCCAAACCCCGGTCCATTCGGACG
AGCAGCAGCAACAGCGGGGGGACCTTGCCCTTCTTGCCGGCGTCGCACCA
TCGGACATATAATCTCTTGGCCACACTCTCGCAGGCTGTGCGAGAATGCA
AGCAACGGGAGCCTAAGCGGGTGTTGGATGCTTTGTATGAGTTGGTGCAG
TTGGAAACGGGCTCGGTCATGGGGCGGGAGGAGCGCTGCGCCTTCCCTCC
CTCGGGGCAATCTGCCGGGTCTGCTTCGACCTCCTTTCCCTCCACCACTC
GGGCATGTGGTGGGCATGCGTCTCTTGCGAGGGGACGCCGTCCAACAGTT
GCTGCGGAATGTATGGAGGGGAAGCAACGACTGCAGCAGCAGCAGCAGCA
GCACGACGCGGAAGAGCATGACAAGGAGGTGATTCTGGCGATGCAAGCCG
AGTTAAAGGAACTGGAGTATGTGTTGGAAGACGAGCTACGGGTTTTAAAT
CGTAAATACGCGGGTATGGTTGAGCTGGCTCGGAGCGGGAGCAGAAGGAC
AGCTGGGTCAGGAGGAGGAAGAAAAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGA
GGAGGAGAGGAGTTTCGGGAGGAGGACTTGCGGGCATTGATTGAGGACAT
TCATCGGAAGGAGGCCGAGCTCAAGCATCTACGCCGGGCTTTGCGCTCGA
AACGAGGGCTCTGCCAATCACGGCATTACCATTACCCCACACAGCAACAA
CAGCAGCAGCAGCAGGCGTCGTGCACAAGCCCGCGGGCAAAGGGCGCCGC
ACAGCGTGTCCGAGAGCGCATGTCGCTTCTAAGTGGTATCCGGGACATGT
CCGGCTTGGCCGCAGCGGATAAATAA
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Synonyms
Publications