NO01G03390.1, NO01G03390.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G03390.1
Unique NameNO01G03390.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2082
Alignment locationchr1:887095..889372 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:887095..889372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G03390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03390NO01G03390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G03390.1NO01G03390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G03390.1.cds1NO01G03390.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G03390.1.cds2NO01G03390.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G03390.1 ID=NO01G03390.1|Name=NO01G03390.1|organism=Nannochloropsis oceanica|type=mRNA|length=2082bp
GACGATTAACCGCCTTGCAATAGAAGCAATCGGTAACGGCAGCCCAAAGA
AAGCGGCATTTCTCATGTCCTGAAACTTGACTAATCGCGGTCAGCTCACT
CTCCATTGCCGGTACAATTGCATATGCTCAGATTCACACGCGAGATGGCA
GATGTCAACGACATCACCGATACCCTCTGGTCCTTCAATCCACCACAACC
CGCTGAGGCGCCCACTTCGCCACGGCCCATCCGCCTGCAGGACATTCCTA
TGCGCATCGTCAACCGTCGTCGACGCTCCACTGAAAACTTCGTGTCGCTC
TCGAGGGCCATACTACCCCCACGTCCAGCTTGTAGGCCTTCCCTGTCCGC
TGCAGCGGCCCGCTACGAAACATTTCAGCCTGTTGCTTCTCTCTTACCAG
CTGTGAACGTGGAAGTCCTTCGACAAAAGGCAGACCTTGCCGAGCTGGAG
GCAAAGAGTCAAAGGAGTACGACCCTCAAAGCTTTAGAAGCTAAGCGACG
TGCGGAGCGACAGACAGCCGAGCTAGTCGTGGCAAAGGAACGGCTGGAGC
AAGACTTGCGACAAGCCACAATCGCCCATCAGAGGCTGACGCATGTCTTT
CAGCGGGTGGTAGAGACCAAACGTAAGGTGGAGGCAAAGCTCAAAAATGA
GCAGCGACAGCAACAACAAAAGCAGGAGGTGGAGGAGGACGAAAAGAAAC
AGGAGCAAGCACTGAGGAAAAGAACGACATCTGCCAATCCGACCGCTTCT
GCACCGCCTTCCCGTGCGACCACCAACGACAACGACGGTGACGACCAAGA
TGCAGCACGGGCACAAGATCTACCTCAGGGATTGCATGAGATTCTGGCGC
AACGGGAAGCTGATCTGATGAACCTACAGGTGAAGCTAAAGCGGCAAGGG
CAAGCACGACACACACAGCTCAAGGAATGGGAGGCCGAGTTGCAGGATAA
GGAGGAAAGGGTCCAGCGCGTAGCTGAAAAGCTGCGCAAGCAACGGAGGC
ACTTGCAAGTTTGTCATGAGCGATCACAACGGCAGTCGTGGGAGGATAAG
GGGCGCAGATGCCGTGCAGCAAGCAAGTCACCGCGGCGGTCCCTCCCCTC
TTCGCCGCTTAGGGCAAGGCGAGTCCGAGTGGCAGCAGGCATACAGAACC
AAGATAATCGCAACTCCGCGATAGAGACTGAAGAGGAAAAAGGCGAGGAG
AAAACAAAACAGCGAGAGCCAGAAGCAGCGGCAGCGGTTGTATCTGTGCA
ATGGGAAGGAGCGCCACGTTGTCGGCATTTGCCGCAGTACAGCACCTCCT
CAAGCGCTGTGGATGGCAAGGAAGAAATTGATGTCGCCCTGGACAGCACC
ATCCTGCCCCTGTCTGTAACGCAAACCGTCCAAGGCAATAGATTGGTTAC
GCAATATGAGAGGAGTCGTGGCGGTGTAGGAGCGACGACTGATGAGGAAA
TGAAAGAACAAAAAGAAACCCGCCTGTTTCGGAATTCAGAAATTATGGCA
GCAGGACCTGCTATTGAAAATTGGGGCCACGAAGAAGGGAGCAAAGGTGA
CCATGACTGTTTGGAAGCAGCAGTCTTTCCAAGTACCGTGGGCTCTAATA
CCCATATTCCTGTTGTACAGCTTGCTCCGCCAGCCATCCCTCAGATTCCG
CCATCCATGTAAGTTATCGTAATCATGTATCTGTCCACTCTCTCCTACCA
TCTGCATTTTCTTATACTTCACACGAACATGCAGATGTGGTAGGATTTTC
CGAAAAGAAATGGCCACGACCCTCGATAAGATTCAGCGAGCTAAGCTCCG
CGTCACCGAGACTTGTGCTGTCGTGAAAACGGATGGCCGCACCCGCACTT
GCAGCCTACCTCTGCCGCCCCCAAGAGTCCCACTACAAGTCGCCGTTACT
ACTGAGTGCAAAAAGATGAAGGACGAAAATGAATTGGAACCAGCAGGCTC
GAAACGGATACCTCGCATCGGTCAAGGCGAGCGGTTGCAGTGGTTAAGCG
CATTTGACGGACGGCTGGCCAAGAGTATGCGAGAGTTTGAAAAATTGAAA
AAATGACTGAAAGAAAAACAAAATAAAAAGCG
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protein sequence of NO01G03390.1

>NO01G03390.1-protein ID=NO01G03390.1-protein|Name=NO01G03390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=513bp
MLRFTREMADVNDITDTLWSFNPPQPAEAPTSPRPIRLQDIPMRIVNRRR
RSTENFVSLSRAILPPRPACRPSLSAAAARYETFQPVASLLPAVNVEVLR
QKADLAELEAKSQRSTTLKALEAKRRAERQTAELVVAKERLEQDLRQATI
AHQRLTHVFQRVVETKRKVEAKLKNEQRQQQQKQEVEEDEKKQEQALRKR
TTSANPTASAPPSRATTNDNDGDDQDAARAQDLPQGLHEILAQREADLMN
LQVKLKRQGQARHTQLKEWEAELQDKEERVQRVAEKLRKQRRHLQVCHER
SQRQSWEDKGRRCRAASKSPRRSLPSSPLRARRVRVAAGIQNQDNRNSAI
ETEEEKGEEKTKQREPEAAAAVVSVQWEGAPRCRHLPQYSTSSSAVDGKE
EIDVALDSTILPLSVTQTVQGNRLVTQYERSRGGVGATTDEEMKEQKETR
LFRNSEIMAAGPAIENWGHEEGSKGDHDCLEAAVFPSTVGSNTHIPVVQL
APPAIPQIPPSM*
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mRNA from alignment at chr1:887095..889372-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G03390.1 ID=NO01G03390.1|Name=NO01G03390.1|organism=Nannochloropsis oceanica|type=mRNA|length=2278bp|location=Sequence derived from alignment at chr1:887095..889372- (Nannochloropsis oceanica)
GACGATTAACCGCCTTGCAATAGAAGCAATCGGTAACGGCAGCCCAAAGA
AAGCGGCATTTCTCATGTCCTGAAACTTGACTAATCGCGGTCAGCTCACT
CTCCATTGCCGGTACAATTGCATATGCTCAGATTCACACGCGAGATGGCA
GATGTCAACGACATCACCGATACCCTCTGGTCCTTCAATCCACCACAACC
CGCTGAGGCGCCCACTTCGCCACGGCCCATCCGCCTGCAGGACATTCCTA
TGCGCATCGTCAACCGTCGTCGACGCTCCACTGAAAACTTCGTGTCGCTC
TCGAGGGCCATACTACCCCCACGTCCAGCTTGTAGGCCTTCCCTGTCCGC
TGCAGCGGCCCGCTACGAAACATTTCAGCCTGTTGCTTCTCTCTTACCAG
CTGTGAACGTGGAAGTCCTTCGACAAAAGGCAGACCTTGCCGAGCTGGAG
GCAAAGAGTCAAAGGAGTACGACCCTCAAAGCTTTAGAGTACGTGCTATG
TTATGAAGAGGCCAAATAGGGAAAGCCTTGTCTCTCGGGAAATTACATTT
CAATCTTCCCCCTATATCACCTTCATTCCTCCTGTGCCTTCTGTCTTACA
AAGAGATTCTCTTTCTATGATCGTGAATGAGCACAAAATACGCGTCTCAT
ATTGTCCTTCCCTTTGATCACTGAATAAACATAGAGCTAAGCGACGTGCG
GAGCGACAGACAGCCGAGCTAGTCGTGGCAAAGGAACGGCTGGAGCAAGA
CTTGCGACAAGCCACAATCGCCCATCAGAGGCTGACGCATGTCTTTCAGC
GGGTGGTAGAGACCAAACGTAAGGTGGAGGCAAAGCTCAAAAATGAGCAG
CGACAGCAACAACAAAAGCAGGAGGTGGAGGAGGACGAAAAGAAACAGGA
GCAAGCACTGAGGAAAAGAACGACATCTGCCAATCCGACCGCTTCTGCAC
CGCCTTCCCGTGCGACCACCAACGACAACGACGGTGACGACCAAGATGCA
GCACGGGCACAAGATCTACCTCAGGGATTGCATGAGATTCTGGCGCAACG
GGAAGCTGATCTGATGAACCTACAGGTGAAGCTAAAGCGGCAAGGGCAAG
CACGACACACACAGCTCAAGGAATGGGAGGCCGAGTTGCAGGATAAGGAG
GAAAGGGTCCAGCGCGTAGCTGAAAAGCTGCGCAAGCAACGGAGGCACTT
GCAAGTTTGTCATGAGCGATCACAACGGCAGTCGTGGGAGGATAAGGGGC
GCAGATGCCGTGCAGCAAGCAAGTCACCGCGGCGGTCCCTCCCCTCTTCG
CCGCTTAGGGCAAGGCGAGTCCGAGTGGCAGCAGGCATACAGAACCAAGA
TAATCGCAACTCCGCGATAGAGACTGAAGAGGAAAAAGGCGAGGAGAAAA
CAAAACAGCGAGAGCCAGAAGCAGCGGCAGCGGTTGTATCTGTGCAATGG
GAAGGAGCGCCACGTTGTCGGCATTTGCCGCAGTACAGCACCTCCTCAAG
CGCTGTGGATGGCAAGGAAGAAATTGATGTCGCCCTGGACAGCACCATCC
TGCCCCTGTCTGTAACGCAAACCGTCCAAGGCAATAGATTGGTTACGCAA
TATGAGAGGAGTCGTGGCGGTGTAGGAGCGACGACTGATGAGGAAATGAA
AGAACAAAAAGAAACCCGCCTGTTTCGGAATTCAGAAATTATGGCAGCAG
GACCTGCTATTGAAAATTGGGGCCACGAAGAAGGGAGCAAAGGTGACCAT
GACTGTTTGGAAGCAGCAGTCTTTCCAAGTACCGTGGGCTCTAATACCCA
TATTCCTGTTGTACAGCTTGCTCCGCCAGCCATCCCTCAGATTCCGCCAT
CCATGTAAGTTATCGTAATCATGTATCTGTCCACTCTCTCCTACCATCTG
CATTTTCTTATACTTCACACGAACATGCAGATGTGGTAGGATTTTCCGAA
AAGAAATGGCCACGACCCTCGATAAGATTCAGCGAGCTAAGCTCCGCGTC
ACCGAGACTTGTGCTGTCGTGAAAACGGATGGCCGCACCCGCACTTGCAG
CCTACCTCTGCCGCCCCCAAGAGTCCCACTACAAGTCGCCGTTACTACTG
AGTGCAAAAAGATGAAGGACGAAAATGAATTGGAACCAGCAGGCTCGAAA
CGGATACCTCGCATCGGTCAAGGCGAGCGGTTGCAGTGGTTAAGCGCATT
TGACGGACGGCTGGCCAAGAGTATGCGAGAGTTTGAAAAATTGAAAAAAT
GACTGAAAGAAAAACAAAATAAAAAGCG
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Coding sequence (CDS) from alignment at chr1:887095..889372-

>NO01G03390.1 ID=NO01G03390.1|Name=NO01G03390.1|organism=Nannochloropsis oceanica|type=CDS|length=1539bp|location=Sequence derived from alignment at chr1:887095..889372- (Nannochloropsis oceanica)
ATGCTCAGATTCACACGCGAGATGGCAGATGTCAACGACATCACCGATAC
CCTCTGGTCCTTCAATCCACCACAACCCGCTGAGGCGCCCACTTCGCCAC
GGCCCATCCGCCTGCAGGACATTCCTATGCGCATCGTCAACCGTCGTCGA
CGCTCCACTGAAAACTTCGTGTCGCTCTCGAGGGCCATACTACCCCCACG
TCCAGCTTGTAGGCCTTCCCTGTCCGCTGCAGCGGCCCGCTACGAAACAT
TTCAGCCTGTTGCTTCTCTCTTACCAGCTGTGAACGTGGAAGTCCTTCGA
CAAAAGGCAGACCTTGCCGAGCTGGAGGCAAAGAGTCAAAGGAGTACGAC
CCTCAAAGCTTTAGAAGCTAAGCGACGTGCGGAGCGACAGACAGCCGAGC
TAGTCGTGGCAAAGGAACGGCTGGAGCAAGACTTGCGACAAGCCACAATC
GCCCATCAGAGGCTGACGCATGTCTTTCAGCGGGTGGTAGAGACCAAACG
TAAGGTGGAGGCAAAGCTCAAAAATGAGCAGCGACAGCAACAACAAAAGC
AGGAGGTGGAGGAGGACGAAAAGAAACAGGAGCAAGCACTGAGGAAAAGA
ACGACATCTGCCAATCCGACCGCTTCTGCACCGCCTTCCCGTGCGACCAC
CAACGACAACGACGGTGACGACCAAGATGCAGCACGGGCACAAGATCTAC
CTCAGGGATTGCATGAGATTCTGGCGCAACGGGAAGCTGATCTGATGAAC
CTACAGGTGAAGCTAAAGCGGCAAGGGCAAGCACGACACACACAGCTCAA
GGAATGGGAGGCCGAGTTGCAGGATAAGGAGGAAAGGGTCCAGCGCGTAG
CTGAAAAGCTGCGCAAGCAACGGAGGCACTTGCAAGTTTGTCATGAGCGA
TCACAACGGCAGTCGTGGGAGGATAAGGGGCGCAGATGCCGTGCAGCAAG
CAAGTCACCGCGGCGGTCCCTCCCCTCTTCGCCGCTTAGGGCAAGGCGAG
TCCGAGTGGCAGCAGGCATACAGAACCAAGATAATCGCAACTCCGCGATA
GAGACTGAAGAGGAAAAAGGCGAGGAGAAAACAAAACAGCGAGAGCCAGA
AGCAGCGGCAGCGGTTGTATCTGTGCAATGGGAAGGAGCGCCACGTTGTC
GGCATTTGCCGCAGTACAGCACCTCCTCAAGCGCTGTGGATGGCAAGGAA
GAAATTGATGTCGCCCTGGACAGCACCATCCTGCCCCTGTCTGTAACGCA
AACCGTCCAAGGCAATAGATTGGTTACGCAATATGAGAGGAGTCGTGGCG
GTGTAGGAGCGACGACTGATGAGGAAATGAAAGAACAAAAAGAAACCCGC
CTGTTTCGGAATTCAGAAATTATGGCAGCAGGACCTGCTATTGAAAATTG
GGGCCACGAAGAAGGGAGCAAAGGTGACCATGACTGTTTGGAAGCAGCAG
TCTTTCCAAGTACCGTGGGCTCTAATACCCATATTCCTGTTGTACAGCTT
GCTCCGCCAGCCATCCCTCAGATTCCGCCATCCATGTAA
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Synonyms
Publications