NO01G02940.1, NO01G02940.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G02940.1
Unique Name	NO01G02940.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4263
Alignment location	chr1:769956..774218 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:769956..774218 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO01G02940.1 vs.
Match: EWM29230.1 (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 313.2 bits (801), Expect = 1.800e-81
Identity = 189/372 (50.81%), Postives = 243/372 (65.32%), Query Frame = 0

Query:  242 CGGDGRGSDDGSVCIIRSGDGAVSMANARKGRMEGNTNEHVSSNSIS--SSNDGDIKATSHGF-----NTTRMINHDAEPVA-----AAAAAGAANVTATEALNTV-NGAAAVMEAVSPSSTPLQMKGHLISILSGGDVAVERTRHLLTSWHLWSLEGGGLSNSSSSSSSVSSTSKCGPVGESTVKAEPGQAKEDLRELANLIQLTLPPSVAAWAKSRGAM---GGTVAATEEQEQVQSFLDMCVDDDGSAICSAVYSGGRLQLTLNSRFAAMYMTLEELETTVARDRLRPELVWRQLLSPECFSAYDEALCQAYFKGQNLGGEACEIIKCVDRFGLEMPCFMRLRIFASSQGTITASVIFLLPLQLSQLVE 598
            C   G G  D     I  G G+     A  G+    ++    +NS+S  SS  G    T + F     +   + + + E V      ++  AG+ + TA  A     N +A    +    +T L+M G  +++LS G+VAVERTRHLLTSWHLWS+E    + ++++ + V                   +AKEDL E+A L++L+LP SVA W +SRG     G ++A  EE+EQVQSFLDMC DDDGSAICSAVY GGRLQLTLNSRFAAM+MTLEE+E T++++ +RPELVWR+LLSPECF AY+EALCQAYF+GQNLGGE CEIIKCVDRFGLE+PCFMR+RIFASS G+ITASVI LLPLQLS+L+E
Sbjct:  537 CLPSGEGPQDSRASGIAGGAGS-----ATNGKESQRSDSACINNSVSESSSERGSAMVTYNNFRGPPADACEVFHSETERVGFLGGGSSTLAGSDHETARSACTKKHNSSARSFASAGGENTTLEMTGPFLNLLSSGEVAVERTRHLLTSWHLWSVE----TRNANAKAHVDQ-----------------EAKEDLEEVAKLVRLSLPSSVAEWVESRGPQVTSGASMALLEEEEQVQSFLDMCADDDGSAICSAVYCGGRLQLTLNSRFAAMFMTLEEMEMTISQEIVRPELVWRRLLSPECFVAYNEALCQAYFRGQNLGGEVCEIIKCVDRFGLELPCFMRVRIFASSHGSITASVILLLPLQLSRLLE 882

The following BLAST results are available for this feature:

BLAST of NO01G02940.1 vs.

BLAST of NO01G02940.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29230.1	1.800e-81	50.81	Zn(2)-C6 fungal-type DNA-binding domain protein [N...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G02940	NO01G02940	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02940.1	NO01G02940.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02940.1.cds1	NO01G02940.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:769956..774218+
coding sequence from alignment at chr1:769956..774218+

mRNA sequence

>NO01G02940.1 ID=NO01G02940.1|Name=NO01G02940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4263bp
GTCGACATATAGCTGTTTTTTTGTCAGGAAGTTCCCGTCTTCGTTAAATG
TGTGCCTTGCTGAGGCTATTGGAGATGAGGCTCGATTCACACAGCTCCTA
TTCGTTCATCTGTGTCCTGTGCGAGCAAAATATACCCTCTTCGTTGGCTT
CTCTGGGAGTGTTGGCGGGCTGGGATGGACCGATTCGTCACTGACGTAAA
GAGTGAGAGTTTAGGGGTCGATGTCACTTTTCCACGAGTAGTGTAGTTCG
ATGTCCTCGTAGTTCATATTTATGTCAAGTTATCGGTAATGAGTGAGTGT
AATCCGAGAACCATGTCAGATGCGGCCGATCCCGCGTTGCGGCCACGGTC
AAGTTTGTCCTCAAACGACGAAAAGCTTAAGCAAGCTCGACAGAAAGCTG
CGAGCTCATCGAAGTTGAGAGGAAATTCCTTTGGACGACTGAGTCGAACC
GTAAAAATATACGCCTCCGAACAAGGTGTCATTTTTCACAAGTTTTCGGG
AAAAACGAGACCGAAGAAATCGAAGCATATGGTCCAATACGTGGACTCCC
GACAGCTGCGGCTCCGAGGCCTCAAGTACATCGTCTTGTCTTGGGTACCC
TTAAATATCCCTCACAATGGCAGCCAGCCAAAAAGTGGCCCTGCATCAAA
TACAATAGGCATTATTATGTGACAGCCCGACTTAGTAAGACTTGCACCCG
GAATCCGTGGCTTTTGCAAAAGCAACTAATTGGAGACTAGCCCTGGAAAT
CGGATGTCGTACGCGTTGGTCTTCAGTGCTGAAGGCGGTCGGCCGACCTT
GACTCGTGGCCGCGTCAACCCGCATTGATTATTTCTTGGCAGTCATTGAT
AACTCATGGAAAATCCCCCACAGTTTTACCCCAGGCCTCTCTCTGTCTGG
GTGAGGATGCAGCCGCGGCCGTTGAGGGGGCGAGATTAGAAAAAAAGCAT
CAAAAGCACCTTGCATTGGCCGCATATTGGACATAGGGCCATCGCATTTG
AGGCACCAAAGTGACTTTGGAGTTATGCCCTGTTTATAAGGGGTCTCTCT
CTGTGATCTTTGTTGTGGTGCCCTCCTGACCGTCGCTCCACGCTGGCCAG
TGTTCCATAAAGCCTCTTGGACCGACGCCACCCGAGAGCAATTTCTTTCG
AGTCGCATGAAGGAGGACCACCTCGTCAGAAACCAGCGGAGTCTGGCGTT
TAAGAGTTTCGAATTTTTGTGTGGACTCCAAAAGGGGGCACGGTGTCTGG
TTTTTAATTCATCCTGCCCTTCGATTGCCTCACCCACCTTCCCTAAACGC
CTATATATATATATAGAGAGAGAGAGAGAGAGCCTCCTCCTGCTTCACTC
CCTACATGACTCCCTTTCTAATGCATTATCCACCTTCTCCTTCCTTGCAC
AGGAAGCAACGTGATGGACACCACTTGTTTGAGCTGCTTTCGCTCGCACG
TGAAATGCGACAAGACACTGCCATGCCGTCGATGCATCAGGTTGAACCTA
AAATGCGTGGCCAACCCCCGTCCCCGCGGAAGGCCCAAGAAGTCCTCCTT
TGAATCAAATGCCACACGTCCCGACAAGGAGGCGCGAAATTGTCATCGCC
ACGGAGGTGGCGGGCATGGTGACGGGGGAGGGGGTTTGATGGGAGGATCA
GTAGGAGGCGCTCCTCCGCCTCCTCCGCCACCTCCTCCTCCTCCTCCTCG
TCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTCCTCATCCTTCTTATCGCCCTTCTCAACAATTCCAACACCCTCAT
TTACCCTACCCTGGCGCTGGTATGGTGGCCCCACGCCCTCCACACACGAT
GGGAATGGGAGTGTATGGGTCGTCCATGTTTCCTCATAATTTTCAGCCAC
ATATGGTAGGACCACCGTCCATGCCACCGCCTCATTTTGGAACTGGGCAC
CCTATGCAGATGGCACAATCCATTGAGATGGGTTCAGTTGCAATGATTAA
TGCAGGTTTCAATAATAATCATGTCAACAGCAGTCGGTATCCTGGTCCAC
CCCCTCCTCCACTTCCTCATCACCCCCCCTGGCTCCTTCTCCTCCTTCTG
CTCCAAGTGTGGTTTCCAATGGTGGTGGAGGAGGAGGCGCTGGCGAAGGA
AATATGAGCGCCGGCACGAAGAACAGCCCGCTTGGAGATGACCAGCAACT
CCGCTCCTTCTCCTCGTCCTCCTCCTCTTCTTATACCCCCACCTTTCCCT
CTGGCGACACACCTGCTTCCGCTGCTAGGGGACACACCGTTGGAAGCCGG
GGAGTGCATAGAGAGGCGATGGGGAACAGTAACAGCAGCAGCAGTATTGA
TGCCAATTTTAATGAAGCGATCGCTCCTTCTTCCATCACCGACCCTGTTC
TGCGCCAGCAGGTTCAACGACATCTCCAGCTGCAGTACCAGAAGCAACAA
CAGCGGGAGCGGCAGCATGGGGGATTGTGCGAGCAGAAACAGCACATAGT
TAGCGGCAGCGATGGCGATAATGGTGCCTGGCCCTCGATGTCTAATCAGT
GGCCCGACCGAGATATGCGCGAAAGAGGACCACCGATCTCCAGCGGTTCG
TCATCCTTCAGAGGGGAGACTTTATTCGAAGGGCCTGGGGCTGGTGTTAG
TACTCGTACTAATGGTGCTGCAGGCTCAATAGGCGCTCCCCTTTGTCTCT
CTTCCAATCAGCCAATATACCCGCCCTTTGGATCCTCAGGTGGGGGAGGG
GAAGTAGTAGGAGGAGGAGAAATAGGAAGGGGGCCTTCAGTCACGAGCAC
CACTAGGGGAACCGGGAACAACAATAATAACAAGGGCGGTATCACCAGCA
TCAGTAGCGGGAGCAGCAGCGACGAGTGTGGAGGGGATGGGAGAGGAAGT
GATGACGGAAGTGTTTGCATTATCCGGAGTGGCGACGGGGCGGTCTCGAT
GGCTAATGCGAGGAAGGGACGGATGGAGGGAAACACGAACGAGCATGTAA
GCAGCAACAGCATCAGCAGCAGCAACGATGGCGACATCAAGGCGACCAGC
CACGGTTTCAACACCACGAGAATGATAAACCACGACGCTGAGCCAGTCGC
TGCTGCTGCTGCTGCTGGTGCTGCAAACGTTACAGCGACAGAAGCATTAA
ACACGGTGAATGGAGCTGCAGCAGTGATGGAGGCCGTGTCCCCAAGCAGC
ACACCTTTGCAAATGAAGGGCCATTTGATTAGCATACTTTCGGGGGGGGA
CGTCGCCGTGGAGCGGACGCGGCACCTGCTCACCTCCTGGCATTTGTGGA
GTTTGGAAGGGGGAGGGCTTAGCAACAGCAGCAGCAGTAGCAGCAGTGTC
AGTAGCACTAGCAAATGTGGCCCTGTGGGGGAGTCTACTGTGAAAGCAGA
ACCTGGACAGGCGAAGGAGGATTTGAGGGAACTGGCAAATTTGATTCAAT
TAACATTGCCTCCGTCAGTGGCTGCGTGGGCGAAGAGCCGTGGGGCCATG
GGTGGCACGGTGGCGGCGACTGAGGAACAGGAGCAGGTACAGAGTTTTTT
GGATATGTGTGTGGATGATGATGGATCAGCGATTTGTAGTGCTGTTTACA
GTGGGGGGAGGTTGCAGCTGACTTTGAATTCGAGGTTTGCTGCTATGTAT
ATGACGCTGGAAGAGTTGGAGACGACAGTGGCGAGGGATAGGTTGAGACC
AGAGTTGGTGTGGCGGCAGTTGTTGAGTCCTGAATGTTTCTCGGCATATG
ATGAGGCGCTATGTCAGGCGTATTTTAAGGGGCAGAACTTGGGGGGAGAG
GCATGTGAGATTATAAAGTGCGTGGATAGGTTTGGGCTTGAAATGCCGTG
TTTCATGCGACTGCGCATCTTTGCGTCGTCACAAGGGACCATTACGGCTT
CGGTTATATTCTTGTTGCCGTTGCAGTTATCCCAGTTAGTGGAGGCCTCG
TGAAGTGGCGGAGACCAGAGCGGGGGGGGTGAAGCATATGAGTTATTGAC
TGGAAAGTAAAAGAGAGCAGAGTGGGAGGAACAAAAGGCAAGACACATGA
TCTACTTAAAAATGTTCTAAGAGTGTGGCTGGAAAGGATAAGGGAAGAGC
CAGGGGAGTGTCACACCAAATATATAAAGTGCCCCCTCCCCCCCCCGCCG
CACCCTCCAAAAGCAGTTTCCGCGACAAAAACATGTCAGGAGTGGATAAA
AAGGAGGTGAGGATCGATCGATCCAGTGCATAAATACATTAACAAAGAGG
TAGTCAGCTGAAT

protein sequence of NO01G02940.1

>NO01G02940.1-protein ID=NO01G02940.1-protein|Name=NO01G02940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MSAGTKNSPLGDDQQLRSFSSSSSSSYTPTFPSGDTPASAARGHTVGSRG
VHREAMGNSNSSSSIDANFNEAIAPSSITDPVLRQQVQRHLQLQYQKQQQ
RERQHGGLCEQKQHIVSGSDGDNGAWPSMSNQWPDRDMRERGPPISSGSS
SFRGETLFEGPGAGVSTRTNGAAGSIGAPLCLSSNQPIYPPFGSSGGGGE
VVGGGEIGRGPSVTSTTRGTGNNNNNKGGITSISSGSSSDECGGDGRGSD
DGSVCIIRSGDGAVSMANARKGRMEGNTNEHVSSNSISSSNDGDIKATSH
GFNTTRMINHDAEPVAAAAAAGAANVTATEALNTVNGAAAVMEAVSPSST
PLQMKGHLISILSGGDVAVERTRHLLTSWHLWSLEGGGLSNSSSSSSSVS
STSKCGPVGESTVKAEPGQAKEDLRELANLIQLTLPPSVAAWAKSRGAMG
GTVAATEEQEQVQSFLDMCVDDDGSAICSAVYSGGRLQLTLNSRFAAMYM
TLEELETTVARDRLRPELVWRQLLSPECFSAYDEALCQAYFKGQNLGGEA
CEIIKCVDRFGLEMPCFMRLRIFASSQGTITASVIFLLPLQLSQLVEAS*

mRNA from alignment at chr1:769956..774218+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G02940.1 ID=NO01G02940.1|Name=NO01G02940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4263bp|location=Sequence derived from alignment at chr1:769956..774218+ (Nannochloropsis oceanica)
GTCGACATATAGCTGTTTTTTTGTCAGGAAGTTCCCGTCTTCGTTAAATG
TGTGCCTTGCTGAGGCTATTGGAGATGAGGCTCGATTCACACAGCTCCTA
TTCGTTCATCTGTGTCCTGTGCGAGCAAAATATACCCTCTTCGTTGGCTT
CTCTGGGAGTGTTGGCGGGCTGGGATGGACCGATTCGTCACTGACGTAAA
GAGTGAGAGTTTAGGGGTCGATGTCACTTTTCCACGAGTAGTGTAGTTCG
ATGTCCTCGTAGTTCATATTTATGTCAAGTTATCGGTAATGAGTGAGTGT
AATCCGAGAACCATGTCAGATGCGGCCGATCCCGCGTTGCGGCCACGGTC
AAGTTTGTCCTCAAACGACGAAAAGCTTAAGCAAGCTCGACAGAAAGCTG
CGAGCTCATCGAAGTTGAGAGGAAATTCCTTTGGACGACTGAGTCGAACC
GTAAAAATATACGCCTCCGAACAAGGTGTCATTTTTCACAAGTTTTCGGG
AAAAACGAGACCGAAGAAATCGAAGCATATGGTCCAATACGTGGACTCCC
GACAGCTGCGGCTCCGAGGCCTCAAGTACATCGTCTTGTCTTGGGTACCC
TTAAATATCCCTCACAATGGCAGCCAGCCAAAAAGTGGCCCTGCATCAAA
TACAATAGGCATTATTATGTGACAGCCCGACTTAGTAAGACTTGCACCCG
GAATCCGTGGCTTTTGCAAAAGCAACTAATTGGAGACTAGCCCTGGAAAT
CGGATGTCGTACGCGTTGGTCTTCAGTGCTGAAGGCGGTCGGCCGACCTT
GACTCGTGGCCGCGTCAACCCGCATTGATTATTTCTTGGCAGTCATTGAT
AACTCATGGAAAATCCCCCACAGTTTTACCCCAGGCCTCTCTCTGTCTGG
GTGAGGATGCAGCCGCGGCCGTTGAGGGGGCGAGATTAGAAAAAAAGCAT
CAAAAGCACCTTGCATTGGCCGCATATTGGACATAGGGCCATCGCATTTG
AGGCACCAAAGTGACTTTGGAGTTATGCCCTGTTTATAAGGGGTCTCTCT
CTGTGATCTTTGTTGTGGTGCCCTCCTGACCGTCGCTCCACGCTGGCCAG
TGTTCCATAAAGCCTCTTGGACCGACGCCACCCGAGAGCAATTTCTTTCG
AGTCGCATGAAGGAGGACCACCTCGTCAGAAACCAGCGGAGTCTGGCGTT
TAAGAGTTTCGAATTTTTGTGTGGACTCCAAAAGGGGGCACGGTGTCTGG
TTTTTAATTCATCCTGCCCTTCGATTGCCTCACCCACCTTCCCTAAACGC
CTATATATATATATAGAGAGAGAGAGAGAGAGCCTCCTCCTGCTTCACTC
CCTACATGACTCCCTTTCTAATGCATTATCCACCTTCTCCTTCCTTGCAC
AGGAAGCAACGTGATGGACACCACTTGTTTGAGCTGCTTTCGCTCGCACG
TGAAATGCGACAAGACACTGCCATGCCGTCGATGCATCAGGTTGAACCTA
AAATGCGTGGCCAACCCCCGTCCCCGCGGAAGGCCCAAGAAGTCCTCCTT
TGAATCAAATGCCACACGTCCCGACAAGGAGGCGCGAAATTGTCATCGCC
ACGGAGGTGGCGGGCATGGTGACGGGGGAGGGGGTTTGATGGGAGGATCA
GTAGGAGGCGCTCCTCCGCCTCCTCCGCCACCTCCTCCTCCTCCTCCTCG
TCCTCCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTCCTCATCCTTCTTATCGCCCTTCTCAACAATTCCAACACCCTCAT
TTACCCTACCCTGGCGCTGGTATGGTGGCCCCACGCCCTCCACACACGAT
GGGAATGGGAGTGTATGGGTCGTCCATGTTTCCTCATAATTTTCAGCCAC
ATATGGTAGGACCACCGTCCATGCCACCGCCTCATTTTGGAACTGGGCAC
CCTATGCAGATGGCACAATCCATTGAGATGGGTTCAGTTGCAATGATTAA
TGCAGGTTTCAATAATAATCATGTCAACAGCAGTCGGTATCCTGGTCCAC
CCCCTCCTCCACTTCCTCATCACCCCCCCTGGCTCCTTCTCCTCCTTCTG
CTCCAAGTGTGGTTTCCAATGGTGGTGGAGGAGGAGGCGCTGGCGAAGGA
AATATGAGCGCCGGCACGAAGAACAGCCCGCTTGGAGATGACCAGCAACT
CCGCTCCTTCTCCTCGTCCTCCTCCTCTTCTTATACCCCCACCTTTCCCT
CTGGCGACACACCTGCTTCCGCTGCTAGGGGACACACCGTTGGAAGCCGG
GGAGTGCATAGAGAGGCGATGGGGAACAGTAACAGCAGCAGCAGTATTGA
TGCCAATTTTAATGAAGCGATCGCTCCTTCTTCCATCACCGACCCTGTTC
TGCGCCAGCAGGTTCAACGACATCTCCAGCTGCAGTACCAGAAGCAACAA
CAGCGGGAGCGGCAGCATGGGGGATTGTGCGAGCAGAAACAGCACATAGT
TAGCGGCAGCGATGGCGATAATGGTGCCTGGCCCTCGATGTCTAATCAGT
GGCCCGACCGAGATATGCGCGAAAGAGGACCACCGATCTCCAGCGGTTCG
TCATCCTTCAGAGGGGAGACTTTATTCGAAGGGCCTGGGGCTGGTGTTAG
TACTCGTACTAATGGTGCTGCAGGCTCAATAGGCGCTCCCCTTTGTCTCT
CTTCCAATCAGCCAATATACCCGCCCTTTGGATCCTCAGGTGGGGGAGGG
GAAGTAGTAGGAGGAGGAGAAATAGGAAGGGGGCCTTCAGTCACGAGCAC
CACTAGGGGAACCGGGAACAACAATAATAACAAGGGCGGTATCACCAGCA
TCAGTAGCGGGAGCAGCAGCGACGAGTGTGGAGGGGATGGGAGAGGAAGT
GATGACGGAAGTGTTTGCATTATCCGGAGTGGCGACGGGGCGGTCTCGAT
GGCTAATGCGAGGAAGGGACGGATGGAGGGAAACACGAACGAGCATGTAA
GCAGCAACAGCATCAGCAGCAGCAACGATGGCGACATCAAGGCGACCAGC
CACGGTTTCAACACCACGAGAATGATAAACCACGACGCTGAGCCAGTCGC
TGCTGCTGCTGCTGCTGGTGCTGCAAACGTTACAGCGACAGAAGCATTAA
ACACGGTGAATGGAGCTGCAGCAGTGATGGAGGCCGTGTCCCCAAGCAGC
ACACCTTTGCAAATGAAGGGCCATTTGATTAGCATACTTTCGGGGGGGGA
CGTCGCCGTGGAGCGGACGCGGCACCTGCTCACCTCCTGGCATTTGTGGA
GTTTGGAAGGGGGAGGGCTTAGCAACAGCAGCAGCAGTAGCAGCAGTGTC
AGTAGCACTAGCAAATGTGGCCCTGTGGGGGAGTCTACTGTGAAAGCAGA
ACCTGGACAGGCGAAGGAGGATTTGAGGGAACTGGCAAATTTGATTCAAT
TAACATTGCCTCCGTCAGTGGCTGCGTGGGCGAAGAGCCGTGGGGCCATG
GGTGGCACGGTGGCGGCGACTGAGGAACAGGAGCAGGTACAGAGTTTTTT
GGATATGTGTGTGGATGATGATGGATCAGCGATTTGTAGTGCTGTTTACA
GTGGGGGGAGGTTGCAGCTGACTTTGAATTCGAGGTTTGCTGCTATGTAT
ATGACGCTGGAAGAGTTGGAGACGACAGTGGCGAGGGATAGGTTGAGACC
AGAGTTGGTGTGGCGGCAGTTGTTGAGTCCTGAATGTTTCTCGGCATATG
ATGAGGCGCTATGTCAGGCGTATTTTAAGGGGCAGAACTTGGGGGGAGAG
GCATGTGAGATTATAAAGTGCGTGGATAGGTTTGGGCTTGAAATGCCGTG
TTTCATGCGACTGCGCATCTTTGCGTCGTCACAAGGGACCATTACGGCTT
CGGTTATATTCTTGTTGCCGTTGCAGTTATCCCAGTTAGTGGAGGCCTCG
TGAAGTGGCGGAGACCAGAGCGGGGGGGGTGAAGCATATGAGTTATTGAC
TGGAAAGTAAAAGAGAGCAGAGTGGGAGGAACAAAAGGCAAGACACATGA
TCTACTTAAAAATGTTCTAAGAGTGTGGCTGGAAAGGATAAGGGAAGAGC
CAGGGGAGTGTCACACCAAATATATAAAGTGCCCCCTCCCCCCCCCGCCG
CACCCTCCAAAAGCAGTTTCCGCGACAAAAACATGTCAGGAGTGGATAAA
AAGGAGGTGAGGATCGATCGATCCAGTGCATAAATACATTAACAAAGAGG
TAGTCAGCTGAAT

Coding sequence (CDS) from alignment at chr1:769956..774218+

>NO01G02940.1 ID=NO01G02940.1|Name=NO01G02940.1|organism=Nannochloropsis oceanica|type=CDS|length=1800bp|location=Sequence derived from alignment at chr1:769956..774218+ (Nannochloropsis oceanica)
ATGAGCGCCGGCACGAAGAACAGCCCGCTTGGAGATGACCAGCAACTCCG
CTCCTTCTCCTCGTCCTCCTCCTCTTCTTATACCCCCACCTTTCCCTCTG
GCGACACACCTGCTTCCGCTGCTAGGGGACACACCGTTGGAAGCCGGGGA
GTGCATAGAGAGGCGATGGGGAACAGTAACAGCAGCAGCAGTATTGATGC
CAATTTTAATGAAGCGATCGCTCCTTCTTCCATCACCGACCCTGTTCTGC
GCCAGCAGGTTCAACGACATCTCCAGCTGCAGTACCAGAAGCAACAACAG
CGGGAGCGGCAGCATGGGGGATTGTGCGAGCAGAAACAGCACATAGTTAG
CGGCAGCGATGGCGATAATGGTGCCTGGCCCTCGATGTCTAATCAGTGGC
CCGACCGAGATATGCGCGAAAGAGGACCACCGATCTCCAGCGGTTCGTCA
TCCTTCAGAGGGGAGACTTTATTCGAAGGGCCTGGGGCTGGTGTTAGTAC
TCGTACTAATGGTGCTGCAGGCTCAATAGGCGCTCCCCTTTGTCTCTCTT
CCAATCAGCCAATATACCCGCCCTTTGGATCCTCAGGTGGGGGAGGGGAA
GTAGTAGGAGGAGGAGAAATAGGAAGGGGGCCTTCAGTCACGAGCACCAC
TAGGGGAACCGGGAACAACAATAATAACAAGGGCGGTATCACCAGCATCA
GTAGCGGGAGCAGCAGCGACGAGTGTGGAGGGGATGGGAGAGGAAGTGAT
GACGGAAGTGTTTGCATTATCCGGAGTGGCGACGGGGCGGTCTCGATGGC
TAATGCGAGGAAGGGACGGATGGAGGGAAACACGAACGAGCATGTAAGCA
GCAACAGCATCAGCAGCAGCAACGATGGCGACATCAAGGCGACCAGCCAC
GGTTTCAACACCACGAGAATGATAAACCACGACGCTGAGCCAGTCGCTGC
TGCTGCTGCTGCTGGTGCTGCAAACGTTACAGCGACAGAAGCATTAAACA
CGGTGAATGGAGCTGCAGCAGTGATGGAGGCCGTGTCCCCAAGCAGCACA
CCTTTGCAAATGAAGGGCCATTTGATTAGCATACTTTCGGGGGGGGACGT
CGCCGTGGAGCGGACGCGGCACCTGCTCACCTCCTGGCATTTGTGGAGTT
TGGAAGGGGGAGGGCTTAGCAACAGCAGCAGCAGTAGCAGCAGTGTCAGT
AGCACTAGCAAATGTGGCCCTGTGGGGGAGTCTACTGTGAAAGCAGAACC
TGGACAGGCGAAGGAGGATTTGAGGGAACTGGCAAATTTGATTCAATTAA
CATTGCCTCCGTCAGTGGCTGCGTGGGCGAAGAGCCGTGGGGCCATGGGT
GGCACGGTGGCGGCGACTGAGGAACAGGAGCAGGTACAGAGTTTTTTGGA
TATGTGTGTGGATGATGATGGATCAGCGATTTGTAGTGCTGTTTACAGTG
GGGGGAGGTTGCAGCTGACTTTGAATTCGAGGTTTGCTGCTATGTATATG
ACGCTGGAAGAGTTGGAGACGACAGTGGCGAGGGATAGGTTGAGACCAGA
GTTGGTGTGGCGGCAGTTGTTGAGTCCTGAATGTTTCTCGGCATATGATG
AGGCGCTATGTCAGGCGTATTTTAAGGGGCAGAACTTGGGGGGAGAGGCA
TGTGAGATTATAAAGTGCGTGGATAGGTTTGGGCTTGAAATGCCGTGTTT
CATGCGACTGCGCATCTTTGCGTCGTCACAAGGGACCATTACGGCTTCGG
TTATATTCTTGTTGCCGTTGCAGTTATCCCAGTTAGTGGAGGCCTCGTGA

Synonyms

Publications