NO01G00380.3, NO01G00380.3 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00380.3
Unique Name	NO01G00380.3
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3868
Alignment location	chr1:92837..97352 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:92837..97352 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G00380.3 vs.
Match: EWM28958.1 (Zinc finger, CCCH-type [Nannochloropsis gaditana])

HSP 1 Score: 94.4 bits (233), Expect = 1.800e-15
Identity = 124/371 (33.42%), Postives = 168/371 (45.28%), Query Frame = 0

Query:  236 GVEGRREERRGEERGEGESDSDSQEGEDDGERETKIG-----------KHGRESREQLQSPVNSGSGDLSQLPCSAFSPRSSSTTQSVAPPPFNRATAP-AFPFLARTSSEPRPPVHCFTRGSIPASSEA--TGFKRMPRDLATGRRVCFYFNNKVCAASDRCPFVHVKVDPSLITPGTFHKPVPASATPTAAPLSLPPSLHPSRSHSSRNGGEAMHLQQLQQQQQQQQQRYRTPTSRPSSFVRSYSMGNDSGRGHIPFPP--PLPQEVRGEGEGGAEGERTERRVPLLQPQQ-QQHQQEEEEEEETMYGYEGGGGEYWEGQ--QQEQQVSPSVHRHYMQLPPAVAAE---GGAGRERGN---GEEQKGGG 582
            G+E + E R G     G  ++    GE++G    KIG           K G         P     G +S +   A  P SS+ T    PPPF    A  + P L   SS           G++PAS     +GF+RMPRD+ TGRR+CFYFNNK C+  ++C FVHVK D SLITPGT  KP P S   +  P  LPPS  PS  H+        H  + +++   +  R  +P        RS S+  + G   +P P   P+PQE   EG G     R ER  PL + +Q  + +  +  EE+     +  GGE  EG+   +     PS  +   +  P +      GG GRERG    G  Q+GGG
Sbjct:  190 GIEEQAEPRTGVADEGGGEEASGGVGEEEGALVDKIGDLYLKKAVATEKEGSGDGGGGLGPAGGSEGGISTM--EAAHPPSSTVTP---PPPFRLGPASLSAPQLCPGSSSRALVKQSSDPGAVPASLPVLGSGFQRMPRDIETGRRICFYFNNKGCSMGEKCAFVHVKADSSLITPGTAQKPPPGSDKLSTGPSFLPPSFPPS-FHAFLPPPLPPH--EARERNYPRGARRLSPPLPAGLIARSPSL--EDGMSWVPHPSYFPVPQE---EGRGRRVARRKERGPPLRKGKQLSESEIGDGPEEDPPEDGKAEGGEKGEGKGGDRGDVFVPSRSQESTEASPLLRQSRGGGGDGRERGRRAAGRPQEGGG 547

The following BLAST results are available for this feature:

BLAST of NO01G00380.3 vs.

BLAST of NO01G00380.3 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28958.1	1.800e-15	33.42	Zinc finger, CCCH-type [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G00380	NO01G00380	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00380.3	NO01G00380.3-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00380.3.cds1	NO01G00380.3.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00380.3.cds2	NO01G00380.3.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00380.3.cds3	NO01G00380.3.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00380.3.cds4	NO01G00380.3.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:92837..97352+
coding sequence from alignment at chr1:92837..97352+

mRNA sequence

>NO01G00380.3 ID=NO01G00380.3|Name=NO01G00380.3|organism=Nannochloropsis oceanica|type=mRNA|length=3868bp
ACCAGGCCGGCAAATACTTTTCGACAGGTCAGCCGATGATTGCATCCAGG
ACCTGAGCAATCAAAGTGGACGAGCAACCTAGACGCGGACCTGGGGGACG
AGATGAAAGGACGCCGGCCGAGCGCGGGGGTGGCTGGACGGGATACCATT
GACGTCGATAGCAGCGAGGAGAGCGGCACGAATACTGCTAGTGCGGCTGC
CACCACCAGCAGCACCGCGGCCCGGGACTCCGTCTCGCAGAGGAAGGTGT
GCGGTAATCACGTGCACGGGAACGTTGACTGCGAGGGCAGGGAGGGCGCG
CATGACGCGTGTCCGGTGGAGAGGGGAGAAGGAGATGCAATGAGGTGGGA
AGGGGGAAATGAAATCAGAAAGCAAGCTAGTGGAGACAATGACAATGAGG
CAGACACACTGCGATCTAGTGCTGGTCCCACGCCCGAGCGTGGCGGCGAC
GCGAGGGAGCCTAGCGCTTCCCGTCCCGTTGGCACTCCCAACCCATCTCG
TCCCGGCGTCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCTACAAATCCCA
CTGCCGAAGGGCCTGTAAAGGAATTAGATCGAGACAACAGCAGTACTACC
AGCACCAGCGTCCACAACGGTAATGTTGCGGACGTCAGCAGCCCCATGAT
GAGCTGCAGGAGCCACAAGGACAGCGAGAGAAGCAGAGATGAAGTTAATT
GTGAAGCAGGGGAAGAGCAGGGGTTGGCGGAGGGGGAAAGGTGCTTAGCA
TCATTGATAGAAGAGGCAGAGTGGCTTCAAATTGAAGGAGAAGGAGGAGG
AGGCAAAGGAGTAGAAGGAAGAAGAGAAGAACGACGAGGAGAAGAGAGAG
GGGAAGGGGAGAGCGATAGTGATAGCCAAGAAGGAGAAGATGACGGGGAA
AGAGAGACAAAAATAGGAAAACATGGGAGGGAAAGCAGGGAGCAGCTACA
GTCACCAGTCAACAGTGGAAGTGGTGATCTGTCTCAATTGCCCTGCAGCG
CCTTTTCCCCCCGCTCCTCCTCCACCACTCAGTCCGTGGCTCCTCCTCCC
TTTAACCGTGCCACTGCCCCTGCGTTTCCCTTCCTGGCCAGGACGAGCTC
CGAACCCCGCCCGCCTGTGCATTGCTTCACACGAGGCTCCATCCCTGCCT
CCTCAGAGGCCACGGGCTTCAAGAGGATGCCTCGTGACCTGGCCACCGGG
CGACGGGTCTGCTTTTACTTCAATAACAAAGTTTGTGCAGCCAGCGATCG
ATGTCCTTTCGTGCATGTGAAGGTGGATCCGTCTCTGATCACCCCCGGGA
CCTTCCACAAGCCAGTTCCCGCGTCAGCTACCCCCACTGCCGCCCCTCTC
TCCCTCCCTCCCTCCCTCCATCCATCCCGCTCCCACTCCTCCCGCAATGG
GGGCGAGGCAATGCACCTCCAGCAGCTGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCGGTACCGCACCCCTACCTCCCGGCCATCCTCCTTTGTGCGCTCG
TACTCTATGGGCAACGACAGCGGTAGGGGTCATATCCCCTTCCCTCCCCC
CCTACCGCAGGAGGTGCGGGGGGAAGGGGAGGGAGGGGCCGAAGGAGAGA
GGACGGAACGCAGGGTGCCGTTGTTGCAGCCACAGCAGCAGCAGCATCAG
CAGGAGGAGGAGGAGGAGGAGGAGACCATGTACGGGTATGAAGGAGGGGG
TGGAGAGTATTGGGAAGGGCAGCAGCAAGAGCAGCAGGTGTCTCCATCCG
TTCATCGCCACTACATGCAACTACCGCCAGCAGTAGCAGCCGAAGGAGGG
GCGGGGAGAGAAAGAGGCAATGGCGAGGAACAAAAAGGAGGAGGAGGAAA
AGGAGGAGGAGGAAGAGGAGGAGGAGAATTTCCGTTCCCCTCCTGGCGTC
GGCAGAAAGGGAATAGAGAGAGAGGCAGGAGGGGGTGGACTAGGGGGAGT
TCGAGGGCAGTGGAAGTGGTTGAGGGAGAAGGGGAGGAGGGAGACGGTGC
ATACAGTGAATCCACCCACCCCCTCCACCAGCAGTCCTACAACTATAGCG
TCGATGGCCCTCCCGCCCCCTCCTTTCTCCCTGCCCAGGCCCCCCTCGTT
GGCGGTGCTTTTCATCCTCCACAACACCTTCCTCCTTCGTTCTCCTCCTA
CTACGCGCGAGGGCCAGCTGCTGCTGTGGGTCCTCTTCGTCCTTCTCCCC
TTCCTCCAGCTCCTCCCGCCTACGTGTACTACCAGTACATCCCTCCCTCG
CACCCTCCCTATCCTATTCTCTACGCCTCCTCCCACCCACCCGCTTACCC
TCCCTACTTACCTGAAGGCGCCGCGGCTCCGTCCATACACTTGATGGGAG
GCAGGGAAGGAGGAGTGGGGGCAGATGGAGGGAGGGAAGGAGGATGGGAG
AAACATTGGTTGGAGCAGCAGCAGCATATCTACCACCCACACATGCAGGA
TGAGTACCAGCAGATGCATATGGCGGATGTCGCGGAGTCGAAGCGGGGAT
GGGAGGGAGGGACTGGGTGGGGAAGGGAGGGAGGGAGAGAGAGAGAGATG
GAGAGAGGGAGGGAGGGAGGAAGGGAGAGGTATTCCTATTACCAGCAACA
ATACCACCATCGTTAGCTCAAACAGCATCACACACTGGCAGCAGTGGAAA
GAGTAGAAGCAATAGCAGCAGTACTCGTAGTAGTATAAGTAGAATAGTAG
CTGTAGCAGCACCAGCACCAGCATCTATGTCAAAGCTTAAAGCAACAAGA
TAGCGATCACTCAAAAGTATCGAGCGGATAGGGACAAGGGGAAACAGGAA
AATGCGGAGGAGGGTGAAGATGAGAAGGAAAACATCTAAGGCAATGTCGG
CAACGTAGGGGAGAGGGGAGAAAATTATAAGGGACGGAGGGAGAGAGGAG
GAGAATAGGGATTGCAATCCTGAAGAGGCAAAGAGAGAAGAAGGGTTGTT
AGTGATGTTGTTTCATGTACGCCTTGCGTGTTGTTGGGAAGTGGGAATCG
CCAAGAGAGGGATTCATGCATGTTGTGTGGTAAATGTCTTACACAATTTT
GGTGTGCAAGGAGGTGCGATCGGTCAATATATATTGTTACATCGGGAGGG
GAGGGAACGGAGAGAAATTCGGATATGTGGTGGTTTGAGAGAGTGGGGGG
AGGACGATCAGTATGAGGACTCTAAGGTGTGGAGGGTGTATTTTTCAAGC
AGAAACGCAGGCGACAAAGGCCACGAAGGCGAAGAAAGGCGCTTTTTCTA
ATTATCTTGTCGCTGCTTGACATGAAGCCTAAGAGTTTTTTCGCCGAGTC
GTCATAGGGGCTGTAGGGAGGAGTGCTGTAAAGAGGTGAGTCGTTGAAAG
GGAGCTTGGAAATGGCCGAAGCAGCTTAGGATCGTCCCTTCAGGTGCTTG
GAAACATCCTAGTTCTTGATATTGATTAGAAAGACTCGTTATTGAAATCA
AGGCGCCGAAGATTGAAAGTAAACCGCGCTGCATTATTATTTCTGTCACG
CCGTGGCCTTGTGCAGCGGATTGAGAAGTTAGTGAACCGGTGGATCAAAA
GCTATGGATAATGAGAGAAAGAATCTGAGACATGAGCCATAAGAAATGAG
AATGGATGAATTTGACCCATGACAAATGACAGGAAAAGCATCTGAATTAT
GAGAAACGAGAGAGATGGAAGCTCAAATTCCTGATTTGCACACCAGGCTG
ACCGAAAACGGAAACCCTGTTCCACCAAAAGAAGGAAGACAAGAGGTCGC
GCAGCAAGCCCTCATTGGATGTAATGCCTTATCTGCCTTCCTAACATTTC
CCTTTGGAGACTCGAAACAGAAAATATCTACAACTGACAAACAAAAAGCA
AAGTTGGTGAATTATTTA

protein sequence of NO01G00380.3

>NO01G00380.3-protein ID=NO01G00380.3-protein|Name=NO01G00380.3|organism=Nannochloropsis oceanica|type=polypeptide|length=838bp
MKGRRPSAGVAGRDTIDVDSSEESGTNTASAAATTSSTAARDSVSQRKVC
GNHVHGNVDCEGREGAHDACPVERGEGDAMRWEGGNEIRKQASGDNDNEA
DTLRSSAGPTPERGGDAREPSASRPVGTPNPSRPGVSSSSSSSSFSTNPT
AEGPVKELDRDNSSTTSTSVHNGNVADVSSPMMSCRSHKDSERSRDEVNC
EAGEEQGLAEGERCLASLIEEAEWLQIEGEGGGGKGVEGRREERRGEERG
EGESDSDSQEGEDDGERETKIGKHGRESREQLQSPVNSGSGDLSQLPCSA
FSPRSSSTTQSVAPPPFNRATAPAFPFLARTSSEPRPPVHCFTRGSIPAS
SEATGFKRMPRDLATGRRVCFYFNNKVCAASDRCPFVHVKVDPSLITPGT
FHKPVPASATPTAAPLSLPPSLHPSRSHSSRNGGEAMHLQQLQQQQQQQQ
QRYRTPTSRPSSFVRSYSMGNDSGRGHIPFPPPLPQEVRGEGEGGAEGER
TERRVPLLQPQQQQHQQEEEEEEETMYGYEGGGGEYWEGQQQEQQVSPSV
HRHYMQLPPAVAAEGGAGRERGNGEEQKGGGGKGGGGRGGGEFPFPSWRR
QKGNRERGRRGWTRGSSRAVEVVEGEGEEGDGAYSESTHPLHQQSYNYSV
DGPPAPSFLPAQAPLVGGAFHPPQHLPPSFSSYYARGPAAAVGPLRPSPL
PPAPPAYVYYQYIPPSHPPYPILYASSHPPAYPPYLPEGAAAPSIHLMGG
REGGVGADGGREGGWEKHWLEQQQHIYHPHMQDEYQQMHMADVAESKRGW
EGGTGWGREGGREREMERGREGGRERYSYYQQQYHHR*

mRNA from alignment at chr1:92837..97352+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G00380.3 ID=NO01G00380.3|Name=NO01G00380.3|organism=Nannochloropsis oceanica|type=mRNA|length=4516bp|location=Sequence derived from alignment at chr1:92837..97352+ (Nannochloropsis oceanica)
ACCAGGCCGGCAAATACTTTTCGACAGGTCAGCCGATGATTGCATCCAGG
ACCTGAGCAATCAAAGTGGACGAGCAACCTAGACGCGGACCTGGGGGACG
AGATGAAAGGACGCCGGCCGAGCGCGGGGGTGGCTGGACGGGATACCATT
GACGTCGATAGCAGCGAGGAGAGCGGCACGAATACTGCTAGTGCGGCTGC
CACCACCAGCAGCACCGCGGCCCGGGACTCCGTCTCGCAGAGGAAGGTGT
GCGGTAATCACGTGCACGGGAACGTTGACTGCGAGGGCAGGGAGGGCGCG
CATGACGCGTGTCCGGTGGAGAGGGGAGAAGGAGATGCAATGAGGTGGGA
AGGGGGAAATGAAATCAGAAAGCAAGCTAGTGGAGACAATGACAATGAGG
CAGACACACTGCGATCTAGGTACTTGCCGGAGTATATCGATAGCGGCAAG
AATGGAAGGGAGGCAAGCACAGCGATCGCATCCGATTCTTATGTTCTCTA
AGTTTATGACAAGGCATGCCGCGGTATTTAACAGCATGCACCCGCACACT
CACATTTCTCCCTTTCTTGCATCATCTCCTTTTTCATATTCAACTTACAG
TGCTGGTCCCACGCCCGAGCGTGGCGGCGACGCGAGGGAGCCTAGCGCTT
CCCGTCCCGTTGGCACTCCCAACCCATCTCGTCCCGGCGTCTCCTCCTCC
TCCTCCTCCTCCTCCTTCTCTACAAATCCCACTGCCGAAGGGCCTGTAAA
GGAATTAGATCGAGACAACAGCAGTACTACCAGCACCAGCGTCCACAACG
GTAATGTTGCGGACGTCAGCAGCCCCATGATGAGCTGCAGGAGCCACAAG
GACAGCGAGAGAAGCAGAGATGAAGTTAATTGTGAAGCAGGGGAAGAGCA
GGGGTTGGCGGAGGGGGAAAGGTGCTTAGCATCATTGATAGAAGAGGCAG
AGTGGCTTCAAATTGAAGGAGAAGGAGGAGGAGGCAAAGGAGTAGAAGGA
AGAAGAGAAGAACGACGAGGAGAAGAGAGAGGGGAAGGGGAGAGCGATAG
TGATAGCCAAGAAGGAGAAGATGACGGGGAAAGAGAGACAAAAATAGGAA
AACATGGGAGGGAAAGCAGGGAGCAGCTACAGTCACCAGTCAACAGTGGA
AGTGGTGATCTGTCTCAATTGCCCTGCAGCGCCTTTTCCCCCCGCTCCTC
CTCCACCACTCAGTCCGTGGCTCCTCCTCCCTTTAACCGTGCCACTGCCC
CTGCGTTTCCCTTCCTGGCCAGGACGAGCTCCGAACCCCGCCCGCCTGTG
CATTGCTTCACACGAGGCTCCATCCCTGCCTCCTCAGAGGTAACCCCCCC
CTCCCTCCTTTCCTCCCTTCGTTCCTTCCTCTTTCTTCATTTTATACTGC
TGTGGTCTCTCGCTGATTTTCCTGCTGTCGTCATCCACCCCTCCTCCTTC
CTACCTTCCCTCCTCTCCTTCCTCCTTCGAGTTTTGTTGTATATCAATGT
GTGCCAACGGACCTCCTTTCTCTTCCCCTCACCCCGTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCAAAGGCCACGGGCTTCAAGAGGATGCCTCGTGA
CCTGGCCACCGGGCGACGGGTCTGCTTTTACTTCAATAACAAAGTTTGTG
CAGCCAGCGATCGATGTCCTTTCGTGCATGTGAAGGTGAAGAAGGGAGGG
AGGGAGGGAGGAGGGAAGGAGTGTTGTTTGGTGTATGGAGTCACATGACG
AGTGTAAGGCCTGTGCGGTCACTCGTTGTGATGTTTGTCGTCCGGACCTG
AGAGAGGGAGGGGAGGAAAAAGGGTGGACGTTTAAGGAATGCCACCTTCT
TCTTGGTGCTTAACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCAGGTGGATCCGTCTCTGATCACCCCCGGGACC
TTCCACAAGCCAGTTCCCGCGTCAGCTACCCCCACTGCCGCCCCTCTCTC
CCTCCCTCCCTCCCTCCATCCATCCCGCTCCCACTCCTCCCGCAATGGGG
GCGAGGCAATGCACCTCCAGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGGTACCGCACCCCTACCTCCCGGCCATCCTCCTTTGTGCGCTCGTA
CTCTATGGGCAACGACAGCGGTAGGGGTCATATCCCCTTCCCTCCCCCCC
TACCGCAGGAGGTGCGGGGGGAAGGGGAGGGAGGGGCCGAAGGAGAGAGG
ACGGAACGCAGGGTGCCGTTGTTGCAGCCACAGCAGCAGCAGCATCAGCA
GGAGGAGGAGGAGGAGGAGGAGACCATGTACGGGTATGAAGGAGGGGGTG
GAGAGTATTGGGAAGGGCAGCAGCAAGAGCAGCAGGTGTCTCCATCCGTT
CATCGCCACTACATGCAACTACCGCCAGCAGTAGCAGCCGAAGGAGGGGC
GGGGAGAGAAAGAGGCAATGGCGAGGAACAAAAAGGAGGAGGAGGAAAAG
GAGGAGGAGGAAGAGGAGGAGGAGAATTTCCGTTCCCCTCCTGGCGTCGG
CAGAAAGGGAATAGAGAGAGAGGCAGGAGGGGGTGGACTAGGGGGAGTTC
GAGGGCAGTGGAAGTGGTTGAGGGAGAAGGGGAGGAGGGAGACGGTGCAT
ACAGTGAATCCACCCACCCCCTCCACCAGCAGTCCTACAACTATAGCGTC
GATGGCCCTCCCGCCCCCTCCTTTCTCCCTGCCCAGGCCCCCCTCGTTGG
CGGTGCTTTTCATCCTCCACAACACCTTCCTCCTTCGTTCTCCTCCTACT
ACGCGCGAGGGCCAGCTGCTGCTGTGGGTCCTCTTCGTCCTTCTCCCCTT
CCTCCAGCTCCTCCCGCCTACGTGTACTACCAGTACATCCCTCCCTCGCA
CCCTCCCTATCCTATTCTCTACGCCTCCTCCCACCCACCCGCTTACCCTC
CCTACTTACCTGAAGGCGCCGCGGCTCCGTCCATACACTTGATGGGAGGC
AGGGAAGGAGGAGTGGGGGCAGATGGAGGGAGGGAAGGAGGATGGGAGAA
ACATTGGTTGGAGCAGCAGCAGCATATCTACCACCCACACATGCAGGATG
AGTACCAGCAGATGCATATGGCGGATGTCGCGGAGTCGAAGCGGGGATGG
GAGGGAGGGACTGGGTGGGGAAGGGAGGGAGGGAGAGAGAGAGAGATGGA
GAGAGGGAGGGAGGGAGGAAGGGAGAGGTATTCCTATTACCAGCAACAAT
ACCACCATCGTTAGCTCAAACAGCATCACACACTGGCAGCAGTGGAAAGA
GTAGAAGCAATAGCAGCAGTACTCGTAGTAGTATAAGTAGAATAGTAGCT
GTAGCAGCACCAGCACCAGCATCTATGTCAAAGCTTAAAGCAACAAGATA
GCGATCACTCAAAAGTATCGAGCGGATAGGGACAAGGGGAAACAGGAAAA
TGCGGAGGAGGGTGAAGATGAGAAGGAAAACATCTAAGGCAATGTCGGCA
ACGTAGGGGAGAGGGGAGAAAATTATAAGGGACGGAGGGAGAGAGGAGGA
GAATAGGGATTGCAATCCTGAAGAGGCAAAGAGAGAAGAAGGGTTGTTAG
TGATGTTGTTTCATGTACGCCTTGCGTGTTGTTGGGAAGTGGGAATCGCC
AAGAGAGGGATTCATGCATGTTGTGTGGTAAATGTCTTACACAATTTTGG
TGTGCAAGGAGGTGCGATCGGTCAATATATATTGTTACATCGGGAGGGGA
GGGAACGGAGAGAAATTCGGATATGTGGTGGTTTGAGAGAGTGGGGGGAG
GACGATCAGTATGAGGACTCTAAGGTGTGGAGGGTGTATTTTTCAAGCAG
AAACGCAGGCGACAAAGGCCACGAAGGCGAAGAAAGGCGCTTTTTCTAAT
TATCTTGTCGCTGCTTGACATGAAGCCTAAGAGTTTTTTCGCCGAGTCGT
CATAGGGGCTGTAGGGAGGAGTGCTGTAAAGAGGTGAGTCGTTGAAAGGG
AGCTTGGAAATGGCCGAAGCAGCTTAGGATCGTCCCTTCAGGTGCTTGGA
AACATCCTAGTTCTTGATATTGATTAGAAAGACTCGTTATTGAAATCAAG
GCGCCGAAGATTGAAAGTAAACCGCGCTGCATTATTATTTCTGTCACGCC
GTGGCCTTGTGCAGCGGATTGAGAAGTTAGTGAACCGGTGGATCAAAAGC
TATGGATAATGAGAGAAAGAATCTGAGACATGAGCCATAAGAAATGAGAA
TGGATGAATTTGACCCATGACAAATGACAGGAAAAGCATCTGAATTATGA
GAAACGAGAGAGATGGAAGCTCAAATTCCTGATTTGCACACCAGGCTGAC
CGAAAACGGAAACCCTGTTCCACCAAAAGAAGGAAGACAAGAGGTCGCGC
AGCAAGCCCTCATTGGATGTAATGCCTTATCTGCCTTCCTAACATTTCCC
TTTGGAGACTCGAAACAGAAAATATCTACAACTGACAAACAAAAAGCAAA
GTTGGTGAATTATTTA

Coding sequence (CDS) from alignment at chr1:92837..97352+

>NO01G00380.3 ID=NO01G00380.3|Name=NO01G00380.3|organism=Nannochloropsis oceanica|type=CDS|length=2514bp|location=Sequence derived from alignment at chr1:92837..97352+ (Nannochloropsis oceanica)
ATGAAAGGACGCCGGCCGAGCGCGGGGGTGGCTGGACGGGATACCATTGA
CGTCGATAGCAGCGAGGAGAGCGGCACGAATACTGCTAGTGCGGCTGCCA
CCACCAGCAGCACCGCGGCCCGGGACTCCGTCTCGCAGAGGAAGGTGTGC
GGTAATCACGTGCACGGGAACGTTGACTGCGAGGGCAGGGAGGGCGCGCA
TGACGCGTGTCCGGTGGAGAGGGGAGAAGGAGATGCAATGAGGTGGGAAG
GGGGAAATGAAATCAGAAAGCAAGCTAGTGGAGACAATGACAATGAGGCA
GACACACTGCGATCTAGTGCTGGTCCCACGCCCGAGCGTGGCGGCGACGC
GAGGGAGCCTAGCGCTTCCCGTCCCGTTGGCACTCCCAACCCATCTCGTC
CCGGCGTCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCTACAAATCCCACT
GCCGAAGGGCCTGTAAAGGAATTAGATCGAGACAACAGCAGTACTACCAG
CACCAGCGTCCACAACGGTAATGTTGCGGACGTCAGCAGCCCCATGATGA
GCTGCAGGAGCCACAAGGACAGCGAGAGAAGCAGAGATGAAGTTAATTGT
GAAGCAGGGGAAGAGCAGGGGTTGGCGGAGGGGGAAAGGTGCTTAGCATC
ATTGATAGAAGAGGCAGAGTGGCTTCAAATTGAAGGAGAAGGAGGAGGAG
GCAAAGGAGTAGAAGGAAGAAGAGAAGAACGACGAGGAGAAGAGAGAGGG
GAAGGGGAGAGCGATAGTGATAGCCAAGAAGGAGAAGATGACGGGGAAAG
AGAGACAAAAATAGGAAAACATGGGAGGGAAAGCAGGGAGCAGCTACAGT
CACCAGTCAACAGTGGAAGTGGTGATCTGTCTCAATTGCCCTGCAGCGCC
TTTTCCCCCCGCTCCTCCTCCACCACTCAGTCCGTGGCTCCTCCTCCCTT
TAACCGTGCCACTGCCCCTGCGTTTCCCTTCCTGGCCAGGACGAGCTCCG
AACCCCGCCCGCCTGTGCATTGCTTCACACGAGGCTCCATCCCTGCCTCC
TCAGAGGCCACGGGCTTCAAGAGGATGCCTCGTGACCTGGCCACCGGGCG
ACGGGTCTGCTTTTACTTCAATAACAAAGTTTGTGCAGCCAGCGATCGAT
GTCCTTTCGTGCATGTGAAGGTGGATCCGTCTCTGATCACCCCCGGGACC
TTCCACAAGCCAGTTCCCGCGTCAGCTACCCCCACTGCCGCCCCTCTCTC
CCTCCCTCCCTCCCTCCATCCATCCCGCTCCCACTCCTCCCGCAATGGGG
GCGAGGCAATGCACCTCCAGCAGCTGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGGTACCGCACCCCTACCTCCCGGCCATCCTCCTTTGTGCGCTCGTA
CTCTATGGGCAACGACAGCGGTAGGGGTCATATCCCCTTCCCTCCCCCCC
TACCGCAGGAGGTGCGGGGGGAAGGGGAGGGAGGGGCCGAAGGAGAGAGG
ACGGAACGCAGGGTGCCGTTGTTGCAGCCACAGCAGCAGCAGCATCAGCA
GGAGGAGGAGGAGGAGGAGGAGACCATGTACGGGTATGAAGGAGGGGGTG
GAGAGTATTGGGAAGGGCAGCAGCAAGAGCAGCAGGTGTCTCCATCCGTT
CATCGCCACTACATGCAACTACCGCCAGCAGTAGCAGCCGAAGGAGGGGC
GGGGAGAGAAAGAGGCAATGGCGAGGAACAAAAAGGAGGAGGAGGAAAAG
GAGGAGGAGGAAGAGGAGGAGGAGAATTTCCGTTCCCCTCCTGGCGTCGG
CAGAAAGGGAATAGAGAGAGAGGCAGGAGGGGGTGGACTAGGGGGAGTTC
GAGGGCAGTGGAAGTGGTTGAGGGAGAAGGGGAGGAGGGAGACGGTGCAT
ACAGTGAATCCACCCACCCCCTCCACCAGCAGTCCTACAACTATAGCGTC
GATGGCCCTCCCGCCCCCTCCTTTCTCCCTGCCCAGGCCCCCCTCGTTGG
CGGTGCTTTTCATCCTCCACAACACCTTCCTCCTTCGTTCTCCTCCTACT
ACGCGCGAGGGCCAGCTGCTGCTGTGGGTCCTCTTCGTCCTTCTCCCCTT
CCTCCAGCTCCTCCCGCCTACGTGTACTACCAGTACATCCCTCCCTCGCA
CCCTCCCTATCCTATTCTCTACGCCTCCTCCCACCCACCCGCTTACCCTC
CCTACTTACCTGAAGGCGCCGCGGCTCCGTCCATACACTTGATGGGAGGC
AGGGAAGGAGGAGTGGGGGCAGATGGAGGGAGGGAAGGAGGATGGGAGAA
ACATTGGTTGGAGCAGCAGCAGCATATCTACCACCCACACATGCAGGATG
AGTACCAGCAGATGCATATGGCGGATGTCGCGGAGTCGAAGCGGGGATGG
GAGGGAGGGACTGGGTGGGGAAGGGAGGGAGGGAGAGAGAGAGAGATGGA
GAGAGGGAGGGAGGGAGGAAGGGAGAGGTATTCCTATTACCAGCAACAAT
ACCACCATCGTTAG

Synonyms

Publications