jgi.p|Nanoce1779_2|626405, gene_9989 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|626405
Unique Namegene_9989
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_49:106190..109439 -

Link to JBrowse

Properties
Property NameValue
TranscriptId626491
ProteinId626405
Product nameTetrapyrrole methylase
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:106190..109439 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004851uroporphyrin-III C-methyltransferase activity
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0008152metabolic process
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626405mRNA_9989-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626405mRNA_9989Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|626405

>mRNA_9989-protein ID=mRNA_9989-protein|Name=jgi.p|Nanoce1779_2|626405|organism=Nannochloropsis oceanica|type=polypeptide|length=335bp
MATTTTVSTASFLFLLLLGSSSTSITAFFLPPSSSQYSPSSYLLRRSRTT
STILQAFRNDSSSFGPSSLSPSFSPTGKGEITLVGAGPGDPDLLTLAAIR
ALSTADIVVADRLIPPEMLALVTGTLKIAGKRPGCAEEAQQEIYRWVEEG
VKEEKHVVRLKIGDPFLFGRGGEEVLKYRDALGVEPRLIPGVSSALAAPL
LGSIPVTHRGVANQVYICTGFGKEGDRPYLAPYNPNQTAVFLMAVGRLGE
LSEQLVQTAGYPPFTPVAIVEQASTPRQRTVVGRVGTIAMYAEKVGVKAP
AVIVVGEVVRVLLEEEGGEEEIKKQVFCKRKNKK*
back to top
Synonyms
Publications