jgi.p|Nanoce1779_2|324055, gene_9970 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|324055
Unique Namegene_9970
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_49:55096..56758 +

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Properties
Property NameValue
TranscriptId324141
ProteinId324055
Product nameAlpha/beta knot methyltransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_49supercontigscaffold_49:55096..56758 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000179rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003880protein C-terminal carboxyl O-methyltransferase activity
GO:0008169C-methyltransferase activity
GO:0008170N-methyltransferase activity
GO:0008171O-methyltransferase activity
GO:0008172S-methyltransferase activity
GO:0008174mRNA methyltransferase activity
GO:0008175tRNA methyltransferase activity
GO:0008276protein methyltransferase activity
GO:00084252-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
GO:0008649rRNA methyltransferase activity
GO:0008650rRNA (uridine-2'-O-)-methyltransferase activity
GO:0009008DNA-methyltransferase activity
GO:0009383rRNA (cytosine-C5-)-methyltransferase activity
GO:0016205selenocysteine methyltransferase activity
GO:0016273arginine N-methyltransferase activity
GO:0016274protein-arginine N-methyltransferase activity
GO:0016278lysine N-methyltransferase activity
GO:0016279protein-lysine N-methyltransferase activity
GO:0016300tRNA (uracil) methyltransferase activity
GO:0016423tRNA (guanine) methyltransferase activity
GO:0016426tRNA (adenine) methyltransferase activity
GO:0016427tRNA (cytosine) methyltransferase activity
GO:0016433rRNA (adenine) methyltransferase activity
GO:0016434rRNA (cytosine) methyltransferase activity
GO:0016435rRNA (guanine) methyltransferase activity
GO:0016436rRNA (uridine) methyltransferase activity
GO:0018423protein C-terminal leucine carboxyl O-methyltransferase activity
GO:00187071-phenanthrol methyltransferase activity
GO:0019702protein-arginine N5-methyltransferase activity
GO:0030792methylarsonite methyltransferase activity
GO:0043770demethylmenaquinone methyltransferase activity
GO:0043776cobalt-precorrin-6B C5-methyltransferase activity
GO:0043777cobalt-precorrin-7 C15-methyltransferase activity
GO:0043780cobalt-precorrin-5B C1-methyltransferase activity
GO:0043782cobalt-precorrin-3 C17-methyltransferase activity
GO:0043791dimethylamine methyltransferase activity
GO:0043803hydroxyneurosporene-O-methyltransferase activity
GO:0043827tRNA (adenine-57, 58-N(1)-) methyltransferase activity
GO:0043833methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
GO:0043834trimethylamine methyltransferase activity
GO:0043851methanol-specific methylcobalamin:coenzyme M methyltransferase activity
GO:0043852monomethylamine methyltransferase activity
GO:0003723RNA binding
GO:0008173RNA methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0006396RNA processing
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL070ncniL070Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G00570NO12G00570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|324055mRNA_9970-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|324055mRNA_9970Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|324055

>mRNA_9970-protein ID=mRNA_9970-protein|Name=jgi.p|Nanoce1779_2|324055|organism=Nannochloropsis oceanica|type=polypeptide|length=271bp
MTLKDKKDKAAVQRILTWEGGEEGGVKMTVTDKHHLNMLADNRPHQGFVL
RAKPLDYIDIDALPPSLPPSLATPPPPLAAINADQPQDQPRQQQQQQQQH
DKHLSHPHHQQQQEHWLALDEVWDPQNFGALLRSAYYLGMKGVVVCAKNS
AALSPAVSKASAGALELMPVYAVKNMVRFLDKCKEEGFAIMGTSLEPASL
PLSQVKIARPTVLVLGNEGHGVRTNVARACDIQVRIEGGGEGGGEVDSLN
VSVTGGILMHFLLSQQQQQQ*
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Synonyms
Publications