jgi.p|Nanoce1779_2|673995, gene_9482 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673995
Unique Namegene_9482
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_34:98101..102050 -

Link to JBrowse

Properties
Property NameValue
TranscriptId674081
ProteinId673995
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_34supercontigscaffold_34:98101..102050 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL052ncniL052Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G00530NO21G00530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673995mRNA_9482-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673995mRNA_9482Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673995

>mRNA_9482-protein ID=mRNA_9482-protein|Name=jgi.p|Nanoce1779_2|673995|organism=Nannochloropsis oceanica|type=polypeptide|length=1129bp
MTLKTFLVAPPFHIVFKPKPPIKTQSTILYAHTHENAYNVSPTHVLVCVM
MREGEGGQPQTARASHRPRQLKRPHCGPFPHKRLTSVLLIHPTIIYLSKP
FHPKQNTDRRAMATPGGSGSCTGSGGIYRMPASRGMPSPSSSSVPATPTP
PTPTPAAAPGLTTPSSSSTHNRGHIPRRSSRGSSVQTKATASSLQKRRSI
VHTQTLTPGGSSAFKGSVLPVSHPHTPESAGKDLLSSSSPHLSNFPASGL
SKTRPLSISSPGVLISSSSTTSSSSTSRPGMKASYSPAVPTPPTTSTRTT
RTPSVQKPLYSRHPQHEKDLSHIHLPKDTNSTSHSRPAPTTTDPPPPSSS
SSSSSSIAARQVKPQLQAAAFAVAPSTLDLSSLPSSTFTSTSTTTSSSSS
AKLVVISAEEKAMDGAPQGTVYQVKVQTTEECRPSLNPSLDLKLVLDTLT
EAQARSNPHSLPSSYPSSSSVTTTAALGAGGAGGRREVGSAAGGGGGGGG
GGGDKAILDWAHEYECIDAVRRLCHHPSLGPSLLQPHLPLLLPFLIRSVQ
NLRSSMQRNALLALRELFNPACLGPAFPPFLGTLCAALLKKLSHGDKKFI
CQACEDVLEAAIEGGGGATVPFLLPALLPLVKDRNPEMAAASLVWIEKAL
MKALEGEREERKEDGGLAALMGGMTSVAISSINNTSNHSSSSSTPPLLPP
GPIDTSLPSPSSLPSFLHTPDPPLLPSLLQSLGLGYDRCRLALGKKAAKR
SLLLLRAQMDAGTEEREGGGGGEKERESPGKVGGKEGGLFEKALRATTLT
KGVVEDILRHTSDAATKRKSLSVVSTPASSPSSSSSSSSSSVSSAFSTIG
SSTSSSTTFSSSSTSTATSFRRTTGVEVSARGGRAGGMCGGREGGNSATR
TTSAFRQHVAVMKRGGGGGGGGGRGEGMISHRRPPFSSSLSSSSVVVALP
PPAVRKGEREGGVLVGNDDSSVSRPTIRSNSRVVATTASSSTTPDVKSKE
EEGEKILLAKTRERTGPAAAAGRRTAAATAAAAAAAAAATVAAAAVTGAG
ASATARRGGVREGGKEKSTPSTLSSKTISLKEAQERGEEMKKAKECGNEE
KERVEEGEKREISAIGSSLGVGEMTSVV*
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Synonyms
Publications