jgi.p|Nanoce1779_2|269406, gene_9297 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|269406
Unique Namegene_9297
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_35:17757..20394 +

Link to JBrowse

Properties
Property NameValue
TranscriptId269492
ProteinId269406
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_35supercontigscaffold_35:17757..20394 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL053ncniL053Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|269406mRNA_9297-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|269406mRNA_9297Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|269406

>mRNA_9297-protein ID=mRNA_9297-protein|Name=jgi.p|Nanoce1779_2|269406|organism=Nannochloropsis oceanica|type=polypeptide|length=778bp
MSQKLVRTIDYDHMDRLCAIHGILHASVPHKPGMSIPDTHAFDLPSLPYH
PNSQFHHPSLLPTHRTIDRTHHVPVHPSLSHRPSTFLSPRLGLGLGPGSM
SFLFFYLGLWAAAAFLRYRTLRQGLLPWSRRRGRYTWSFTGWAIVWECKT
SSSSFPFASSLPLHRSTENNNERERDPPYYENGKADKKKSFLLKDNLSIV
AFIIGQVLVILFLAWNCCVTLLQSSFSSSSFSSSSLPPSFSDDYGRTHQH
EQHRRLSTAIPSSFSSSYSSYSPFPFSFHIATYLKPLSLLPSSSSSSSPS
SLLLLWLASLLSLLIHEWGHARWAIKEGIGYQAFGVYLALGLLPGAYVLL
DPSLLSSLPPLPQLRVICAGIWHNLLLCICLAFLLLTDLASWPVSTTNQG
ILLLPPPAFLPPSSPLFHLLRPGEILSSLQDTPTPSLSTYYSLLEQQVNL
TAHRARALSSLIPNPQMANATITRLLENLLPALPFPNPPFLPPIAAVDTA
GLLQSETFCTSLNLLSPQHMKGGKEGGKDGRRLPHCCTFDALTGEEGKEG
ERGKEANEGATCFAAFDLLLKQQLFPTPPPSLSTSFPPSSSFVTLTCLPA
RDVLLHSTLFSSAPPSLPPSSICLRPVNLPPNVLLKLTLSSSHVLAYEGP
LHPFLPPISPPSLITDHHPRPWLKAVLPPSLALALSPFLLRLIAAMLDVS
FSVAAVNVLPCPSLDGMHALGLFLRLVFGGGRGRRRERGRGKEEVVSAWV
RWGVGGLVVVNVVLSLLAAWEGRGGEA*
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Synonyms
Publications