jgi.p|Nanoce1779_2|673832, gene_9035 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673832
Unique Namegene_9035
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_30:257987..274957 -

Link to JBrowse

Properties
Property NameValue
TranscriptId673918
ProteinId673832
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_30supercontigscaffold_30:257987..274957 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0003677DNA binding
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL048ncniL048Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02750NO13G02750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673832mRNA_9035-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673832mRNA_9035Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673832

>mRNA_9035-protein ID=mRNA_9035-protein|Name=jgi.p|Nanoce1779_2|673832|organism=Nannochloropsis oceanica|type=polypeptide|length=2954bp
MVSEKDLRAPSSRAAAIASMLLREREREVAAAAAAAAAVKRARKPPVQHV
TPLPKSLKTNSLRAEALFRHLPQSSLLSYPASSPHIDKKSFALRQLEQVG
DGVHSSMYGIRTTQQREQGLRRSNRTTGDKKEEWIKIPVEASVCVEGSDP
QTLDGFVYLSSENLQLYKRGGLVFFETFWKGGCYNFQVLEEQLPMLTTEH
PLYVAELAKIEEMKNRKLHVISELVKLSCSNVDLEYDMEVLAIEHSHSKD
LLALKFQLLETMTATGEQTVTTNTSSAKSVSRKRIWRKDHPDDKNPMVNA
RSAISAIPTMYLTKYMLLSFRMVSWNESGNGPPTNEMLAFMDRLRSSGGP
GGSIKVARSDHDDRVLELTINHPKSRNALTGQMMMNLHDITLELTTAKAN
SKFKDCCALILRGEGSSFCAGADFHLASSIATPEQGVLMAELMTDTLTRL
RRAPLITVAAIGGPAMGGGAEVATSTDFRVMSTNGKIQFIQSRMGVSCGW
GGTSRLVKLVGRQKALHLLGAAPSLDAATALEIRLVDKICDEHTDVQLAA
WEFLSPFLTHTTEALRAIKVGVAAEDLGWEQARESTRNMDLFEAGYPDLL
QSEPEKGKEADDLALFHRLFPTAAKVASSTIDGSTTNSATIYRKACINYV
GPAFLARQREGGSDDVSITDSESSGRDLTRGGGMREQHKQQQQQQQQQQL
TGLMSQDEVEDLVDRKELLLKRLEIVMGGGRKGGREGWAESTKRKGNTIT
AGAAAAAAAGKSTVPPKVGDVHWDFLLKEMQWMATDFEQERASHLRQRKK
CGKAVVSYFDKQGSREEKLAREEQERRRRVAGRISREVKGFWKKVNKVVA
FKQKLEVDEGRKRAMDKHLTFLVGQTERYSKMGGGTDGEGGTEGGDEEEE
WATEGEVEDDDDGSFSLEGEEGGEDKGWGEEEAREEEEAERALDLQEEEE
AREGGRETYKEELETLREEGEISVEELKRRYAAMKEAEEEEGEWRDEEGE
EEEEEIEEDEEDEEDEGEEDEYVPMEVDREEEDAERDMDAQEEEEGREGG
VEEEMAALKREGEMTVEELRKLYYGNGGDEGEAGRKEEEEEKEEEKEEEE
EFPSSDSDGEGEYQMEGEEEEDDEASLEEQDARERGGYMEELKLLNAEAA
MSPEELKRLYYGDGEGGWEEEERGASAAAIAAAAAAVGDGRRRGGSFTAA
LLEQEEKDDEEEEEEEEGEEEDEEEEENLDEEYVAEEEEDDERSLDAQEE
EEGREGGDEEEVAALQRENDMPLEELKRLYYGGRGATPLPENEDDDEEDK
AEDEGMEDDISETSNSSLHAPAERKEKEGGREGERGAGGSTSGPEESEGG
KEEAMEKESEEKGGEGDAMMHRLEEMDEKARTVAVERPFLLAPVLKLREY
QHSGMNWLVSLFERRLNGILADEMGLGKTVQTISLLAYLAAHRGIWGPHL
IVVPTSCLVNWESEFKRFCPALKILPYYGSAPARKQLRQGWTKPGAFHVV
ITSYQLVVQDANAFKRKKWYFLILDEAHNIKNFKSQRWQTLLTFNSHRRL
LLTGTPLQNDLMELWSLMHFLMPHVFRSRKEFSYWFSNPLNSMVEGSRAV
SDGLIQRLHTIMRPFLLRRLKKDVEKQLPGKFEHIVMCPLSRRQAQLYEE
FMARSSTRAALSGGSFMGMMNVLMQLRKVCNHPDLFEPRPIRSPYAMSPL
SLAVPKRVVDVLEPTSPLETVSSFLVHFLWQKPSPSSLPSSSLFNPPEHQ
EDAHLLHRTFCLAASPSHLQSLLPSLPPSLPPSSIAATDPHIAAHMTALS
AHLAHEREDQHQLMARVSQQRCGALFFDAIKLDVDRAAELSPLINRFTCV
VPRSLVFPDRWLIQYDAGKLQVLARLLPALKRGGHRVLIFTQMTKMLDVL
EQFLSLHGHVYLRLDGGTGVDRRQKLMDKFNNDEKIFCFILSTRSGGLGI
NLTGADTVIFYDSDWNPAMDAQAQDRAHRIGQTREVHIYRLVSEKTIEEN
ILRKARQRRHLDFLAITAGNFTPEQMYNQRSLTEMLLGDEREGEGGKEGA
VVTAPAAGVSAKEVQAAMAAMEDEADVAAMRDAEMEGAEEMNEFDDSKRG
GGGGGGVGGGGDEDPTGGGAGEGPGEEADEGGEGDDNKSTATRVSKKSKG
EEGGREGEGEEGAMGEEEFAAFQNRLGPDVGAIEARLRPVERYAFRFRTE
IDPYYSLFYVSEEQRRRELEEDAAATAVDVEVLEAAAAAEEAKSLEEGEV
LATSMDMEPEAIQQQEWGYRKERGRRRAEARRRAMTGDDWVREVEALSGY
PYWFNKDTGEAVWDTPAVVMEREAHARAREEGFGGLPAGVLQHLMTFLPP
APGRIRAGAVCVKWRVASLHPSFYKRVLSVEGAATMVKARQAAAAAAAAL
AAKKKKTPPLPSLPSSSKEGGEVEGGEIQPEVFLSLRAALAAAVDGETLL
LDPGHHWPDDDIATPPSLPSSSSSSSSLVIDKHVRLLGDSFEASRVVLEL
RGTLLLQAGREGGREGGRGGFLTLQMMTIRRPGSCLEASSCMKVVREGGR
VTLVGVVVNDEGGGGGSGGGEGGREGGAVEVEGGGELVMYGCTVQGAEGG
RAGVRVGERARAILCGCEIVRNSGPGVGVGKEGSVILLDCRLGENEGGGL
EAREEGACLVMKHNDLTGNKVASLRTLGGREGGKEKGVVKVNVSGFKNLV
EQGEEDWKRGMVGKESYRVDPGLFDNLQDEEDQGAMAAAAAAAAKDRIGR
KEKRKRDALEDGHEQQEQPPKPRASRVQSAEETRALYEVPRYSALRVDPA
FERVAVHLPNTQKRTSVMRKNWQQRQQQQHQQQLQREVGEEEKEGKEQKG
EPPQLQQQPTPEQQQQQQQQQQQQQQQQLQQQQQQQQQYAAYLYAQQQHQ
APLPTLPPHTQQQQQQQQQQQQQQQQQQQQQQQQQHAAQEMQPFLEAFVS
LMA*
back to top
Synonyms
Publications