jgi.p|Nanoce1779_2|622354, gene_900 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|622354
Unique Namegene_900
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:694565..696139 +

Link to JBrowse

Properties
Property NameValue
TranscriptId622440
ProteinId622354
Product nameputative nicotinate phosphoribosyltransferase
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:694565..696139 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004516nicotinate phosphoribosyltransferase activity
GO:0004514nicotinate-nucleotide diphosphorylase (carboxylating) activity
Vocabulary: Biological Process
TermDefinition
GO:0019363pyridine nucleotide biosynthetic process
GO:0009435NAD biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03100NO02G03100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622354mRNA_900-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622354mRNA_900Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|622354

>mRNA_900-protein ID=mRNA_900-protein|Name=jgi.p|Nanoce1779_2|622354|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp
MSSFVRPMLTDMYQITMVFAYWKQKRHQDRAIFELFFRKTPFKGEFAIMA
GIDEVLKYLAHFRFSEEELIYLRKQIPHAEEDFFVWLGQLDCSAVKVYAL
PDGTTCFGIEPLIRVEGPLAIGQLLETTLLNLVNYPSLIATNAARHRLAV
GPDKVLIEFGLRRAQGPDGAMSAAKYSYLGGFDGTSNVLAGRLLSIAISG
THAHAYVQSYVSLDDLQNPFLDDQNLVEKALAYRSTLGFSDSNLGEFAAF
VAYAQSWPDNFLCLVDTYDTLNSGIPNFLSVALALHDLGYAPVGVRLDSG
DLAYLSKRIRAWFTRVASTHGRPTFEKLRIVASNNINEDVLYALSKQGHS
IDAFGVGTHLVTCQAQPALGCVYKLVEICGKPRIKISNEVEKVTLPSRKD
LYRFFNESGVAVVDFMTKNGEAAPKPGQRRLCRHPFDSKKRAYVTPSTVE
PLLKLVWDGQAGGIQPGALRTLGESREFVMDQLKGIREDVLRHINPTPYK
VSVSEELHALLHQLWEMNAPVGQL*
back to top
Synonyms
Publications