jgi.p|Nanoce1779_2|533007, gene_8854 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|533007
Unique Namegene_8854
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_29:34442..35671 +

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Properties
Property NameValue
TranscriptId533093
ProteinId533007
Product namePyridoxal phosphate-dependent transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_29supercontigscaffold_29:34442..35671 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004758serine C-palmitoyltransferase activity
GO:0016769transferase activity, transferring nitrogenous groups
GO:0030170pyridoxal phosphate binding
Vocabulary: Cellular Component
TermDefinition
GO:0017059serine C-palmitoyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL046ncniL046Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533007mRNA_8854-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|533007mRNA_8854Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|533007

>mRNA_8854-protein ID=mRNA_8854-protein|Name=jgi.p|Nanoce1779_2|533007|organism=Nannochloropsis oceanica|type=polypeptide|length=410bp
MQGTRVVVKEKILLNLASFDFLGLAGRPEVKDAARAALNKYGCGSCGPRG
FYGSIDVHVGAEQAMAKFMGAEEAISYSDAASSVSSTLPAFAKKGDLLVV
DDGVYEPIQTAINLSRAQVRWFRHNDMEDLKRVLEGVAREDARLGRNVLE
QRRFVVVEGLYKNYGDLCPLPALVALKKEFCYRLYLDQTFSFGCFGKGGR
GVAEHWGVDLGEIDIMSVSISHALGSVGGMCVGTHEVVDHQRLSGAGYCY
SASAPPFTSSAAIAALELLEKEPGLVAKLQENASFLSRNLRKIPGLEVRS
EEVSPILHVGLTQEGGWGGRKYEQEILREVSRGCVAGGYAVVTSKVTCLV
EEREGGRGGERAGGGVALALPSLRLTVSAAHSQAELQGAVNVIRKVVGAA
LKKRKQSRG*
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Synonyms
Publications