jgi.p|Nanoce1779_2|532418, gene_8443 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|532418
Unique Namegene_8443
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_24:293922..295838 +

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Properties
Property NameValue
TranscriptId532504
ProteinId532418
Product nameE3 ubiquitin-protein ligase HERC2
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:293922..295838 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL039ncniL039Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00900NO23G00900Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532418mRNA_8443-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|532418mRNA_8443Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|532418

>mRNA_8443-protein ID=mRNA_8443-protein|Name=jgi.p|Nanoce1779_2|532418|organism=Nannochloropsis oceanica|type=polypeptide|length=639bp
MSYNELSFLLRRVYREQYGAATEGAALLAHARGPLSDKPALRGIAPERLL
ARSSLLRIFNQRLIRALPLLSLALPEVEWQREQIGHSDPISVETTYPPSF
SSSFSSSVSSTAGIWRPACTARRIRSLRKLILTHTKRAHWEGMLQATTTP
TPLHQDEYEDPREIKTIKINRVRASASRLASIRNMNERLRLSVFGQLHKE
MRNWSHSAFRRAHLGKGHGGQKRAFKVRFLGEGVNDYGGPYRAVFEQVAD
ELQDDRHLLPLAAPSPHRPGGEKCLLPLLVPCPNRTGAVGPNQDKFVLSP
GLPSPLALELMQLLGKMVGMALRHGLPMGLDLPSTVWRPLVGLPLNRDAL
ESLDLLAVRNLEQVEQTALAAEMKAARAGREGREGGQEGGGEEGSSSLVP
EGWEEELTFTTHLSDGSLVALPYVPPSPVVPQPQQQQQQQHQQHQQPSSQ
RVTRANWREYVRLVETVRLKESSPMLRAFQDGLASVLPQELFPLFTEEEV
ERLICGVREVDVDLLKQCTDYEEGTEAGQAHIQAFWEVLREMTPQERTDF
LRFAWARSRMPASAKDFPMNFRLQGPQGGAKESPDDYLPHAQTCFFSLSL
PRYSNKEILRAKLLLAISNSPNMDADVRLHTAEGWAET*
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Synonyms
Publications