jgi.p|Nanoce1779_2|229768, gene_84 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|229768
Unique Namegene_84
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:226978..228707 +

Link to JBrowse

Properties
Property NameValue
TranscriptId229854
ProteinId229768
Product nameThiamin pyrophosphokinase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:226978..228707 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0004788thiamine diphosphokinase activity
Vocabulary: Biological Process
TermDefinition
GO:0009229thiamine diphosphate biosynthetic process
GO:0006772thiamine metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01080NO01G01080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|229768mRNA_84-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|229768mRNA_84Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|229768

>mRNA_84-protein ID=mRNA_84-protein|Name=jgi.p|Nanoce1779_2|229768|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MNPRCSNSSLSSSSLSSRNNNNNNNNHNNNNNNNNNNIHGEGPSRLPVFN
WRNRRDFGEHDAQGLVAATAAGQQYGSEDDSDGSDEEGEKEEGVVNALII
LNTDCVGGGLFYKFWAHASVRICADGGANRLYDGLGGEEREQFLPSAIKG
DLDSVRPEVVAWYKAKGCRVVKNGDVDTNDLEKCLELLKHTGEGGNDQRQ
QQQQQQQQQELPPWERKQHPTRQSLRTNVFVLGALGQRFDHAMASCHLLY
RYAGVFKRLVLLGNESVAFLLPEGRNWVEPDGRMEGPLCGLIPLGRQCRE
IRTRGLKWDLRGESMEFGGLVSTSNEVVGERREDGREGVWIETSDPVIWT
MALKEEWRKDFLHV*
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Synonyms
Publications