jgi.p|Nanoce1779_2|602793, gene_8188 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|602793
Unique Namegene_8188
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:379291..380494 -

Link to JBrowse

Properties
Property NameValue
TranscriptId602879
ProteinId602793
Product nameCu/Zn superoxide dismutase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:379291..380494 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004784superoxide dismutase activity
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006801superoxide metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G02190NO21G02190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602793mRNA_8188-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602793mRNA_8188Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|602793

>mRNA_8188-protein ID=mRNA_8188-protein|Name=jgi.p|Nanoce1779_2|602793|organism=Nannochloropsis oceanica|type=polypeptide|length=161bp
MARCVAIIRGAPGDMEMSIQGFIRFEQASETTPTIIDGVITGLAPGRHGL
HVHTFGDFSEGLAGAGGIFNPFGKAHGAPDDEERMSGDLGNVEANAEGKA
EFHLEDKHVRIIGAHSVIGRSVVVKAQEDDLGRGGQDQSLVTGNSGPRIA
GGVIGIAPSM*
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Synonyms
Publications