jgi.p|Nanoce1779_2|602475, gene_8098 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|602475
Unique Namegene_8098
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:144576..146670 -

Link to JBrowse

Properties
Property NameValue
TranscriptId602561
ProteinId602475
Product nameChaperonin Cpn60/TCP-1 family
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:144576..146670 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0044267cellular protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005515protein binding
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO21G01380NO21G01380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602475mRNA_8098-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|602475mRNA_8098Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|602475

>mRNA_8098-protein ID=mRNA_8098-protein|Name=jgi.p|Nanoce1779_2|602475|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MSRGLNYNQAAGLQGMLKEGTKSMEGVDEAVIRNIEAAKQLARICSSSMG
PNGLKKLVVNHLEKIIVTSDCATILKELEVQHPAAKMLVLAAMMQEKECG
DATNLTVSFAGELLKKAEDLLHTGLHPSEIVAGYRTAFEKAMDILPTLTV
HTVDDPRDALQVSHVLESVLGTKYFGFQATLAPYVTQACQAVMPSLPKKP
SLNVDSVRVCKLQGGTIEDSLVMKGIVVSRSTEGTIKRALKAKVAVYGCG
IEASSTETKGTVLIRNAEDLLNYNKGEEKLMEDIIKGIAESGIAVVVTGG
SISEMALHFLERYKLMVVKIPSKWELRRLCGAVNATALVRLGPPTAEEAG
FVDVVEVREVGGRKITVFEQNAEESRVASIILRASTHNVLEDLERAVDDG
VNMVKVLCTDGRFLPGAGAVEIELARRIYKLADATTGLDQYAMRKFAEAL
EIVPRTLAESSGQDATDTVAALYAEHEKGNVTAGVDVEGTGVKVGAEGVQ
GVCDSLFVKDSALRLAVDAALTVLRVDQIIMSKPAGGPKPPAGGGGDEE*
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Synonyms
Publications