jgi.p|Nanoce1779_2|654806, gene_7904 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|654806
Unique Namegene_7904
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:127867..130767 -

Link to JBrowse

Properties
Property NameValue
TranscriptId654892
ProteinId654806
Product nameNup93/Nic96-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:127867..130767 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005643nuclear pore
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00820NO26G00820Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|654806mRNA_7904-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|654806mRNA_7904Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|654806

>mRNA_7904-protein ID=mRNA_7904-protein|Name=jgi.p|Nanoce1779_2|654806|organism=Nannochloropsis oceanica|type=polypeptide|length=879bp
MGGGMGDQVLSKARAFLPSEQVEGMNRLAYSLGVKSAFQPISSALPPTTA
ASTEVSSPVDMDLDGYFDHQYAQIIANALDEASEAAETSAHRAQLRWEDD
DWARAKQELIKHRRVQGGREGGREVLELALAREDGREGAIEVAAEAGLSA
ANALRLARGTSRLTDTQRRYAKATSAATEGGREGGREQGLCQRLLSVAKG
ISRLGGREGGVVVEDQDEFRRTLELLRNMLEKEEGERYVPAVPSSFPHST
ALEGEGGNDGEEEEEEEEEEEGELWKAILPGRARIHLELDFASHVQRKVD
RVRAERGGEGGRGGGATMEEYVKNYGKGGRGEREGGDEDWVYEVLYYSLR
AGGVERAVEYVVGGEGGARGIFPEVRAVLLDLWKGGREGGREGGVEEGVL
AVRALAAQREGLGGVFEKAVLNLLGFVNGGRLDKKYVVRTTEDYLWWSLW
FCSVGPTEGGREGRREGLWEEVAGRVLRWGEAHFDREGGKAFLYCRVLFC
VGMFEEGVRHVAKSKHGEATHLAIVLSHYNLLTNLTTRGTSPSLPSSSSS
SSSSSLLEMLVVSYIKDFWLTDPTYAADYLLFLRPAIPRMEAGLEALLLA
QEEDAARSLLASHLKGKTVVIHDLISTTGRTRMGERTRMWKRYVWNETRA
KMVLRRAGMAAEALDARKALMLYVLCEDYRRATGVMNKQVALLLLAGMEG
RREGGGGGREEWWGLMEREGRGLVDKLDEEGGGDGGRRVKKEFELLVGLR
RWWEGERERGEGGRKGAGLAVIYDELRLFPRRSGERDGGRAMYVLQEGSD
EMKRVMACVAVKTMQALYGEWRGRKRQREEGGGEAGNEGGLIEVREKGRA
LVELVMGARKEMGNDALASIQRYESMMI*
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Synonyms
Publications