jgi.p|Nanoce1779_2|600281, gene_7861 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|600281
Unique Namegene_7861
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:530888..532753 +

Link to JBrowse

Properties
Property NameValue
TranscriptId600367
ProteinId600281
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:530888..532753 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0018658salicylate 1-monooxygenase activity
GO:0016491oxidoreductase activity
GO:0004497monooxygenase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006725cellular aromatic compound metabolic process
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600281mRNA_7861-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600281mRNA_7861Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|600281

>mRNA_7861-protein ID=mRNA_7861-protein|Name=jgi.p|Nanoce1779_2|600281|organism=Nannochloropsis oceanica|type=polypeptide|length=288bp
MFDDGSRVKAQCILAADGVHSVLRQKFVGDGKPREHGRLIYRSVIPYPAT
DREEMMGKINTEPSKLIHWQPCGEKNTYWAVIKKGGASPPIRRDGNPTRM
KQWLLHEYADFPDILGMIEATPAEGILERPNGRVLLIGDAAHAMILSVGQ
GANTALEDAVYIASYLRDAYALFPKNKGKAVQAAFEAFQNVRVKHCTDIQ
VRRRKRERKRGRKRGTKGGRERREEGKEGNEERKGREGKNRAQRKGRKGM
YIYRLHHSLAISLSRKRTGTNVKYTAHQSSPSSFHFP*
back to top
Synonyms
Publications