jgi.p|Nanoce1779_2|545282, gene_7519 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|545282
Unique Namegene_7519
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:163211..165565 +

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Properties
Property NameValue
TranscriptId545368
ProteinId545282
Product namePlasma-membrane choline transporter-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:163211..165565 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545282mRNA_7519-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|545282mRNA_7519Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|545282

>mRNA_7519-protein ID=mRNA_7519-protein|Name=jgi.p|Nanoce1779_2|545282|organism=Nannochloropsis oceanica|type=polypeptide|length=651bp
MAALDALEIFLVTIAGVVAIFSIVICCSAACLACCGGAFTPLFCWAGWIL
ACCNPWGGRPSSYHAMGGHGGGTFTTVTIIPPPPNVVISSDLPQASAPPA
MAVAEAMPWQQQHHHHHLKQLNETFSSGVVSGITLEGSAPPAVPPSSSLP
SISYQYSTSTTSNMTTINVPPPPQTTAPRDLWALLLFVLHMCFLIALAIR
LGLPSLGVWEHALVDTSSHTIPTNYSTQIITTTTHLLYLSVLLALLADLI
ALAWLYFMLQWSSLLIHSTIYTTVLVSSLLSFLSLLQGRPIGFLLFALLA
LTGLCLLYEEQSRIFLSSANLGTACRALLEHRKLFGVAYLFLFLQFLFAL
IWSVAALGVYASIAAAAENGKHQQHQTAGQHTLLCLFLVLSLYWGSEVCQ
NVLKCTVVGTIASWWYFPDVSFEPVAPALARAAGPSLGSICVGSFFVGGI
ESFRALLRGMGGGRGGGTLCCCCRGICGCGLLGWLIDYALSCVEAMWRTF
NRFTFVFVGVWGYGYREGGRLAMKLFEAKGWDLVLNDYLIGNVLFLGSVM
VGGIVGFVGVGFTRMFPYFFVGLPLPSLFIGVVGFVIGVGNCLVLVSVLS
SAVDTVFVCYAADPGVLQVNRPVEFACLEAAWEGGRMGEQTRLNAVQVMI
*
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Synonyms
Publications