jgi.p|Nanoce1779_2|672728, gene_7425 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672728
Unique Namegene_7425
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:476928..485894 -

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Properties
Property NameValue
TranscriptId672814
ProteinId672728
Product nameMetalloenzyme, LuxS/M16 peptidase-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:476928..485894 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0046872metal ion binding
GO:0008270zinc ion binding
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01990NO24G01990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672728mRNA_7425-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672728mRNA_7425Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672728

>mRNA_7425-protein ID=mRNA_7425-protein|Name=jgi.p|Nanoce1779_2|672728|organism=Nannochloropsis oceanica|type=polypeptide|length=1201bp
MVCVDKRRLCAQEWEGRTDLERGWRAEEMARNHGAPLTPHPSFCQRRVHC
NAEDYLDKDSNISFFFMTLSIGHTHGLKHACIPGSRASSSSSSSSSGGSI
IGSRRNGNNGNLAQPPSRNPSCLSSNMDEQEENDPRRQVVVGAGSTLLFA
LGLLSDTNKGEKDGRSFVASAAEGAEVESGDVLTYPGKTVVFKGEVQQSP
ADTKKYRALTLGNGLKVLLVSDSAAERSAAALDVHVGHFSDPVDLPGLAH
FCEHMLFLGTKKYPDEASYSQYLSAHGGSSNAYTDTEDTVYYFDVDAAFL
EGGLDRFSEFFKSPLFTETATSRELNAIESENAKNLQNDGFRAYQLEKSR
ANPLHPFSKFGTGNLQTLLYGPQSKGQDVRAALFNFHEKYYIAPRMTLVV
VGKEPLDTLQRWTEGRFKGVPTRPNVRYSDLEPWRYPPPSSPSSFPSSSP
SSLPPPFLPSAFGKSLHVVPVQPLRKLSLTWVVPFENDASHRRALIDKPE
YYVSHLLGHEGEGSLLSYLKREGLANALGAGYTSEMGDFALYEVAVDLTE
RGELELDKITEAVFSYLALLRAKTNGDGGSEGGGGGGIPKYVYEECQTLA
DLGWRFQEKSESVSVASTLVSNMQSFPPALYIAGPARLFQVNEQAVEMLL
QSLLPTKVLVTIYSKRFASEADQAETWYRTPYKEFDVSAQLVAYEQQEKK
RAFPLLTKQPPPLQIHQPNPFLPRDLDLKAPTVPQPAIGSPIPGPSLLND
GESWRVFHKLDRTFGKPRVYAIFQVANPAFGSNPRNVALTRLLKVAFQDA
LSEFSYPAALAGLSYEVDFTAKGLRLAVGGYHDKLPQYTREVAARLYNFY
QQLSSPSSSPSSASFDRYKDIVTRELEAFDNLQPYQHAGYHANLLLEEPK
WPIPTIRDALLPLTLADLAAFASPSTLFSQGYGTALLQGNILESEAIALT
ETVAAAIPFGAVLPKEKRTSRQITRLPATPSSSWGLLLRRPEENKENTNG
ACQLCFQVESKEMKTRVTAELFSQLVEQPFYETLRTQQQLGYLVFSGMRV
TEGIPSLLFIVQSNVADPETLADRMLLFIESCGKILEGLSQGEFESFVAG
LVGKKLEREKRLEQQAGRHWEEISLGEYKYDRPQKEAALLRQLTKQNVVS
FYRSFLLSQGPSRRLLTTQVYPQKMMEGGRGGGKEEVKIDGTRVEGGSGG
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Synonyms
Publications