jgi.p|Nanoce1779_2|598585, gene_7392 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|598585
Unique Namegene_7392
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:404130..410926 -

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Properties
Property NameValue
TranscriptId598671
ProteinId598585
Product nameextrinsic protein in photosystem II
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:404130..410926 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009279cell outer membrane
GO:0016021integral component of membrane
GO:0009654photosystem II oxygen evolving complex
GO:0019898extrinsic component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO:0042549photosystem II stabilization
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598585mRNA_7392-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|598585mRNA_7392Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|598585

>mRNA_7392-protein ID=mRNA_7392-protein|Name=jgi.p|Nanoce1779_2|598585|organism=Nannochloropsis oceanica|type=polypeptide|length=310bp
MKTAILVASIGCAQAFVPQMNVQPSFMDQLKAGVSKALPVLVGGSAFIAP
SISNALTKDDLSSLSYLQVKGTGLANRCPEVVGEGSIGLQPGKVYQLGDL
CLEPKTWQVEEEVTNKRGETTKSFVNTKLMTRQTYTLDGVSGEISVGEGG
KIKFVEKDGIDYAATTVQLPGGERVPFLFTIKELTATAGQPGNALKPGFQ
FGGSFKVPSYRSGLFLDPKGRGAVTGYDMAVALPGLQNSVDGDEELFKEN
NKVFDVTNGNIELEVNKVNAEDGDIGGVFVSTQFSDTDMGSKAPKKLLLK
GIFYGRVSQ*
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Synonyms
Publications