jgi.p|Nanoce1779_2|133423, gene_7390 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|133423
Unique Namegene_7390
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:397260..403253 -

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Properties
Property NameValue
TranscriptId133509
ProteinId133423
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:397260..403253 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0030983mismatched DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01660NO24G01660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|133423mRNA_7390-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|133423mRNA_7390Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|133423

>mRNA_7390-protein ID=mRNA_7390-protein|Name=jgi.p|Nanoce1779_2|133423|organism=Nannochloropsis oceanica|type=polypeptide|length=1431bp
MQPPLTPYRCTLCFSILFLLLLLLPTAATTIMLSSIVRAHARRSSIAAFS
SSSSIITPWLRRACFPSFSSSAHPRNVASFPLLAATRKGTSSSSTTTTTS
SSNGEMTTGGQREQAQAPLQKETKRRKSTGTGNSSSRRASTSSSPTAEGG
EEFSIDLATNIITATTRIRKARGAKASTLPEEDGPEPSALLGNDVLGRSS
CSSSSSLFTSPLASPDASISSSKMDDSFSYWNTTNDDFTPELLRLQAGAP
PSTSTSSSSSSFSSSSSSSSSSFSSLHPYWLKRLALLQRPSARALIRQLL
PSNALGFDAGPSLSQRKGSLFHYVLLQKQKHPDKIILTRVGEFYETYGVD
ALMLIEYAGLNPMGNKAKAGCPIKNVQATLDGLTSAGLTVAVIEEVGDVD
TTARATKKTKARILSQIVSPAASTYLYDCCLRTDDIAYPENRPFLGLLNL
PSNGFTIVEVHVDSRTARVTEGLTEDGVKAMLSAGGVAEPVYTQDVDRDL
LRALCPGGGEVEKRELQGHTAGRSFYQALVHALARDLEMETLSEEMNLRV
APPLQSRPRPIPLSTALQIGLLPNPAVPDLLPHLLPQSLPLLRVHSARFL
RRWLLTPPPYHLADAMQNICRFFSSPPSSLPSSSSSSFPSSPGPPQCRPF
AIGKLVSMLSLGQGNVPLFRDVVGCLEAMLVVLGEEEGGKEGEEEGGRNG
GRSPSPFKAIIPSVRAIVAYESGMEVGEARLRERAAAAVAAIHDVIIPGR
IDDHPSTPSSFSSSEGDAAGKGGGRGGGGGGGGIATVPSLFFERNEEPFR
NAIRPDHPSVRDALEKVKGAAEDLCLAVARDFDPKCEIVLDPFNNALMMK
KKPSATFHSSFPPSSPSSSSSSSSAYIHPTDRHRKPLSSRYTTASVEASL
HTYLSSCSLATAAVRRSLHALSSQLREDLPTLVTSIHFAVVLQAAAAHVA
AAKQKGWVLPTLVAPPPPKREEGGRQEGSTEESIDPSPCTFPSPPSLPPF
WRLTLPNLTPYWLPRSIGGVSSTVDLQGLFILTAPNMSGKSTLMRAMAVA
ALLGNCGLMVPCVVEEGGEGGGGREQGLGRGGEGDGGGGGEGGGREGGRN
DGHGVFIPRFDHLFLRTASYDVPSEGKSAFALEMDDVRVLLRDSSSKSLV
FLDELGKGTSAREGAALSGALIEALDAVPVTGIFATHLHEIFNLPLKTSS
RVQWKRMGFEYPEKGREGGGREGGKVKWTYQLEDGRCLDSMAWYTARKYG
IPETILERARVLGGDFDEACRGGAGKGRKEGGKEGGRTLEGAEEVLRDVL
QRYYSSPSSLSSIPPSFPSFHRVLPSFDPSPSLEGSACLYILFLPSSPSS
SLPPSFYVGETESVRQRLAQHRTRFEGGREGGREGGLEALAVPLSHKGEA
RVLEGLMINAMIERGFPLWSDKDGRRKVGK*
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Synonyms
Publications