jgi.p|Nanoce1779_2|558506, gene_7375 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|558506
Unique Namegene_7375
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_19:360889..363481 -

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Properties
Property NameValue
TranscriptId558592
ProteinId558506
Product name[FeFe]-hydrogenase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_19supercontigscaffold_19:360889..363481 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0008901ferredoxin hydrogenase activity
GO:0009055electron transfer activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Cellular Component
TermDefinition
GO:0042597periplasmic space
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL030ncniL030Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G01520NO24G01520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558506mRNA_7375-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558506mRNA_7375Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|558506

>mRNA_7375-protein ID=mRNA_7375-protein|Name=jgi.p|Nanoce1779_2|558506|organism=Nannochloropsis oceanica|type=polypeptide|length=700bp
MLGPFLFAWARIGPTAASAAALRRLPKPRTFAAASFSTTPPAIPTTSPTA
TFPAEEQLVNVEINGRSIAVPAYATILEAARAAGAFVPTLCAHPSIPACA
TCRICLVELETGQGTKKVVGPASPTDARRVEKLVPMSKLVPACITQVKEG
QRIHTHSPDVLENVRFILQLMRAKHPNTCQTCDADGNCTFQDLLYRYQVE
DIAPTEIRKNFEHHHEWDGGASIGTPTDSQTPAPSKDTPYGAITFDPDKC
VKCGRCVAVCQKIQGVGAIGFVGRGADMHLSTMQGLPFDQTKCIECGQCV
AVCPTGAMRERHDLFHVIDALQNKEVVKVAAVAPSVRVAISEEFDLPPGR
ISMGQIVVGLKQLGFDYVFDTNFAADLTIMEEGTEFLSRLKKEPGAGPLP
MFTSCCPGWINLVEKNYPYLIPHLSSCKSPQGMMGAAVKNVWAPRVGRDP
ADVVNVSIMPCTAKKGEAHRPADRAATYSAKLDTTVPNNDYVLTTREIGR
LFRLHKISLPALESQAPDDPLGESTGAAVLFGATGGVMEAALRTAYELAS
GGQPLPKIEMSDIRGLQGVKSARVCIPNPDGKGPGAVVRVGVVHGTAETR
ALLERMKSGDESAQFDFVEVMACRGGCIGGGGQSKSDDPFVLQKRIAHVY
NLDVESAIRKSHENPSIKKLYQEALGEPGGHLSHQLLHTQYTDRSQDTK*
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Synonyms
Publications