jgi.p|Nanoce1779_2|562607, gene_725 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|562607
Unique Namegene_725
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:292333..294933 -

Link to JBrowse

Properties
Property NameValue
TranscriptId562693
ProteinId562607
Product nameProtein of unknown function (DUF2723)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:292333..294933 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|562607mRNA_725-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|562607mRNA_725Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|562607

>mRNA_725-protein ID=mRNA_725-protein|Name=jgi.p|Nanoce1779_2|562607|organism=Nannochloropsis oceanica|type=polypeptide|length=867bp
MASYWTTLGEVIAGGDSGKLVAEACRLDTLRLTQYPLLTLLQRLVILCLP
VAGSPSWKANIISAICTTMAAGCLFLCIVVFGQARHRCYHPSMSSSNDSL
ATATSTTTLVAAAAGAGLFAWSPLVWRYAVSAEVFALNNALLALLLYTTL
RFASSWTSQDRRFWACTTTLLCGLALANQHTAILVEVPVVFYLAWCLRRD
LARQPSGIIIELGRWFILGLFPLVYALLSVLWRPQIGRLGNMITWQEIWS
QLRQGEFPDLQPASDPDDVTYRESAYCSQGAYAWDLILRQGQWGLVPLLA
LLGYVAATVFTAPFLLPPRYRGERAKVTRATDGYIQQILTNVPAPQPPCT
HTKDARSQGPYHKAEAKARQESHHVIWALGGAWVLSLFAFDFFSPEPLNE
SVELSYNMMARFWMQANLLVFMLAGVGMDWLSCVVARGQWQVGRQQDSRF
SFNLTASLAQAVCVVLALWQFQQHFAMSGQYANTYSEKYARSLLAPLPPD
SLLLVNHKLQWNSLRYMQSCKNYRLDVTILKLSLMSLPWWPSLGSHHSGK
VIFPGTHHVPENHCLARGGQAFAMHQFVDANIDRVGGIFVAGNLTFSQTE
EQLRSVFTMLPMGLNMQLFRREDVWTMKEWLKRIFETWHLLQQHSQNLLS
LAELPALDKYQRGKWEYEIRRDYLDHLAETAAHALDEAIGHQNLYNRSAG
GGNDDMTHSPTTTKMSSTLVLKHFLDAAWWLEVLVAHDPEHTTHTLNNLG
LAYYHLLYLSPTVSLATAEAQLRRVPRVSPFNDASLATTASQWYRGPGRQ
ETDWRMWLLNRLEYTWGTCLTRPDAQQLPEVGKLQQQHKMIVARMRPLLE
KKENLASRKFRGADDP*
back to top
Synonyms
Publications