jgi.p|Nanoce1779_2|557633, gene_7184 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|557633
Unique Namegene_7184
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:482878..485106 +

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Properties
Property NameValue
TranscriptId557719
ProteinId557633
Product nameGlycoside hydrolase superfamily
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:482878..485106 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0042973glucan endo-1,3-beta-D-glucosidase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01740NO22G01740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557633mRNA_7184-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557633mRNA_7184Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|557633

>mRNA_7184-protein ID=mRNA_7184-protein|Name=jgi.p|Nanoce1779_2|557633|organism=Nannochloropsis oceanica|type=polypeptide|length=383bp
MTLPHLPPSPSSFHSSSSSSSSSSSSIPAPSPSSSLASLHTSPPTLFPVL
PQSLALGVCWAPKHNMTNPSVEILEDALLIRRHFRQVRTFYSSYYSLPVL
PLFVRAGIKVVLGVFMYPEEPSWTEAEKQTAIQSAIAYPEETLAIYVGNE
NVYPYKNFTVDMLVKHMRDVREGVREGLLLKAKEGGWEGSKIPPVGTVQR
LTEWMIEGKEMDRLAESSDLIGVNLYPYFSVDGEDLETQWAKMVKRYPKH
AHKIRMTETGWPSAGNPNFANFTASHDQARDFYSTYLKWACKQSKPEGGK
EGWVSPAATAVKETFYYAYFDGRAPSVAPDYEAHFGLVSESDNTPKFPLA
EGGLCPTKMKEQGMKDETERGVEGGIEDDMKE*
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Synonyms
Publications