jgi.p|Nanoce1779_2|595697, gene_7125 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|595697
Unique Namegene_7125
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:341348..343060 +

Link to JBrowse

Properties
Property NameValue
TranscriptId595783
ProteinId595697
Product namesnRNA-activating protein of 50kDa MW C terminal-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:341348..343060 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01220NO22G01220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595697mRNA_7125-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595697mRNA_7125Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|595697

>mRNA_7125-protein ID=mRNA_7125-protein|Name=jgi.p|Nanoce1779_2|595697|organism=Nannochloropsis oceanica|type=polypeptide|length=512bp
MSSVPYSVGNFASEFEYWPLPPDEEALTLPGYRPPGYFDCDDIALPTPKE
AVERGMATALVRWADWEGMHMSPGMVEGQKLVRLPPGIKLKEHETEGERA
VRIQSHSEKLRGLAAKEATSIDVNSSSHAKGKAAGLVAGASGVRSASGGG
GGDSGCCCPPSTAGEESPVGPDKETMLEILDLVPDLKRAETQLLARMRAS
QLALGRWRIANELEGGGMRDFRRLPFLRKTVNVVQAPAHVGTMAEAGTYA
VQDDEAMVTITTFGHRASMLYRYQDYMLLARNTLGDLHRMIYCTLAAVLA
KENEQGNVPEELNDNLLAFFFIEGKFYATLRRKEGDEKEEIEAETEKEEE
EGRSNERKENLDFIDAIIAWVNERGKDRRMQLGLSSDLPIEVLDMETVQL
ADLSLRLGTRYLYCHLGECEHHFNVSDVRLPSPEDPRDGREYPLLVFQKH
YRKRRCMACDVRPAKFCVLGDPVGDDHKMVYCEFCHYLLHYDAQGHLLRD
DFEVFPYIHDD*
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Synonyms
Publications