jgi.p|Nanoce1779_2|595519, gene_7074 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|595519
Unique Namegene_7074
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:230541..232730 -

Link to JBrowse

Properties
Property NameValue
TranscriptId595605
ProteinId595519
Product nameputative monoglyceride lipase
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:230541..232730 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004620phospholipase activity
GO:0016298lipase activity
GO:00187311-oxa-2-oxocycloheptane lactonase activity
GO:0018732sulfolactone hydrolase activity
GO:00187333,4-dihydrocoumarin hydrolase activity
GO:0018734butyrolactone hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00760NO22G00760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595519mRNA_7074-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|595519mRNA_7074Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|595519

>mRNA_7074-protein ID=mRNA_7074-protein|Name=jgi.p|Nanoce1779_2|595519|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MVLNTPAGLLLAAYALVITWVAWYFFRMLWGHHSQEESMVKHYGEDRRRV
PYAAPCPIPSHISLTEKFVMNARGMLLYTCAWHPSHIERPKALIFQCCGF
ADTNTFLPMMRSIRLAERGFVVVGMDPEGHGRSDGLHAYVPSFPTLVEDY
WQFFIKEIMTNPAYAGLPVFLLGESMGGNVAIQLLLRDRTEKKKNPKKHK
SFFAGAVFLAPMVKISPALKPPECLVNLLRQVAPFIPTLPVAPTKDVLAQ
AFRRPDILEMARNSPYGYRMKPRLGTALQLLEATEEVAGRMEEVEHPFLL
LQGDADVVTCPEVIKEFHAKAGSKDKELKLYEGMWHSLVGGELEPHIERV
YGDMFAWLERQLLKQGKEEEEDKEEEEKAEVREVEGMARRRSTRRSVKVS
G*
back to top
Synonyms
Publications