jgi.p|Nanoce1779_2|557893, gene_6908 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|557893
Unique Namegene_6908
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:403070..404062 -

Link to JBrowse

Properties
Property NameValue
TranscriptId557979
ProteinId557893
Product namePhosducin-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:403070..404062 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01000NO13G01000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557893mRNA_6908-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557893mRNA_6908Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|557893

>mRNA_6908-protein ID=mRNA_6908-protein|Name=jgi.p|Nanoce1779_2|557893|organism=Nannochloropsis oceanica|type=polypeptide|length=310bp
MSSSSSSRTLEISLFQSNAPGCYGSWTEEQAEATFDRCRRSKEGGPCCST
EFNYEKDQCQHHQLQQQQQQQQRQQQYQYKEERPGPHTGPKGVLADYKAH
QQVTNALRAHEQAHRQAVLLRIARGSNSGTITSITSPHLLPIYERNDNDS
NDDDDLFLRNYRAQRLNDLKLQQQQQQQQDSLLHRPRFGGVEEVSGSRMV
EMIETLRNSSPCTKTIVHIYESHLPACRLVNSFLPHLAAKHPFVSFLRLH
QGFNLPRHDLKLDEEALPLLLVYDGGDVKECVARVDNYLGAAFLCEDLEG
LLEEKGVWG*
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Synonyms
Publications