jgi.p|Nanoce1779_2|596616, gene_6871 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|596616
Unique Namegene_6871
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:303574..305469 +

Link to JBrowse

Properties
Property NameValue
TranscriptId596702
ProteinId596616
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:303574..305469 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01380NO13G01380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596616mRNA_6871-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596616mRNA_6871Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|596616

>mRNA_6871-protein ID=mRNA_6871-protein|Name=jgi.p|Nanoce1779_2|596616|organism=Nannochloropsis oceanica|type=polypeptide|length=499bp
MPKRFKASSGGSSGSTSISTNTNTNTNTSINNNNGGGDDSISSSAVSSSR
RRKHEIVYGAVVPKALTLAAKQAAASGAVTSAVAKETALATTTRRARAVE
STTSDAASMSTVSRSAAPKRATTTSASASSSPATAAPSSTSTTTKTPKKK
TQSASTSSMSTTTAITTATTATSTTTATRNATSTSSKKIKTIPLPVPPAI
AAAALAAARANAAAVSNTPILLHTLPKLYFATVVHRPSKVCKSPYLCDIQ
VKGQTSLTMAHTPSLGCSGLVSPGAEVLVSESTSKSSTTKSTHVLHHVVK
REDDGTSHWIGTHPMTANILAEALLIGGHVFPNLPPVENVQKEVTMGNSR
FDFVVTHSDGSLTVVETKNVPVADNFDGTKKERAALLAACEEAPNAYGKV
AIFPDGYRKKVADPVSPRALKHVQELELIAQEGGKRACLLFVSQRTDVAS
FVVASTDVQYRAAVQKAANNGVVLKAFSVRWDGATGRAYLHTELPIVW*
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Synonyms
Publications