jgi.p|Nanoce1779_2|530936, gene_6813 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|530936
Unique Namegene_6813
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:166125..167537 -

Link to JBrowse

Properties
Property NameValue
TranscriptId531022
ProteinId530936
Product namephosphoribosylformylglycinamidine cyclo-ligase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:166125..167537 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004641phosphoribosylformylglycinamidine cyclo-ligase activity
GO:0016882cyclo-ligase activity
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01930NO13G01930Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530936mRNA_6813-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530936mRNA_6813Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|530936

>mRNA_6813-protein ID=mRNA_6813-protein|Name=jgi.p|Nanoce1779_2|530936|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp
MAAENPVETNDNKEKNKEGHDAQRYRARGVSATKQEVLAAVQSNGERHSS
AASASLYPRAFCKVLPDIWTNDPAAAIVMHADGAGSKAALAYAYWRETGD
LSVWKGIAQDALVMNLDDVYCVGATRAPGLVTSTIARNRRMVPGEVIKAL
IEGLEEVMEELRPWGVDLRLAGGETADLGDQVQTLTVDCTLATRMPRADV
IDNGNIQAGDWIVGLASSGLPAMYEARRLYNSGIGSNGLTAARHDVLAPE
VGLRYPETFDPALKDLAYCGTRHLTEWMDIDKQRIRVGQLLLSPTRTYAP
VLAKLLHHEAGLRDYVHGIVHCSGGGQTKVLRCLDPSRAPLHLVKNNLFK
VPDVFRLIAEEQEKHRMLCGRGNEETNGARETEWREMYQVFNMGHRMEVY
VGGGEEQAQGVIAVAEAMGVAAKVVGRVEEGKTGVVGERHSLTVHHVGFG
GGGGGGGGGLEGGGAKFVYT*
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Synonyms
Publications