jgi.p|Nanoce1779_2|112329, gene_6775 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|112329
Unique Namegene_6775
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:68694..70288 +

Link to JBrowse

Properties
Property NameValue
TranscriptId112415
ProteinId112329
Product nameTryptophan RNA-binding attenuator protein-like domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:68694..70288 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02370NO13G02370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|112329mRNA_6775-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|112329mRNA_6775Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|112329

>mRNA_6775-protein ID=mRNA_6775-protein|Name=jgi.p|Nanoce1779_2|112329|organism=Nannochloropsis oceanica|type=polypeptide|length=325bp
MLVPAMRHSGGRGIISLTRSRLSAQRILTQLVTPKPASRAPEAFLGGVVI
ARRSIFNGLSGADKDKALLAKKQDEELALAKPIDFDVSSRIEGAETQIVM
VDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISD
FKYHGEEGTAGTVALGTEFPSKVIRVTLADYGGALICQKGAFLCGTHLTG
MEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLR
VTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMP
FDPFADSGVREVLNDIWSTVWGDR*
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Synonyms
Publications