jgi.p|Nanoce1779_2|122238, gene_6578 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|122238
Unique Namegene_6578
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:188528..191577 +

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Properties
Property NameValue
TranscriptId122324
ProteinId122238
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:188528..191577 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|122238mRNA_6578-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|122238mRNA_6578Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|122238

>mRNA_6578-protein ID=mRNA_6578-protein|Name=jgi.p|Nanoce1779_2|122238|organism=Nannochloropsis oceanica|type=polypeptide|length=972bp
MSQPQSLPLLCLQHEVEVQPLHLQGPHQLSPARSRTLSPLPSFSSPPHSP
SRKPDKQTAPSMALPIASTGSLPSADASLPSRPPSRTSSTQTAPDSSVSA
VQTARPSAIPPPLALLPRPPSRATSTQTEADTPSPALPSAPLSPCLQSAS
PARPLWNLPTGMSPPYPTSALPSSPPVPCSAPPASPLQSLLQNGMTGDGK
TLTLARQGLRDTTILTHLYRRRLLQHGSSGSSSITLGSILLSLDLSFNNL
EIVNGLRNFCELKHLDLSHNNLTDIRCRYPPRLETLKLSHNKITSVAGLD
GMEAGLLRVLDLSHNPLWMVDGIMHLKGLTELDLSHTRLRKPLDVRLLSF
NASLQSLSIIGTPLAQKCVKSGKIVIMSLLPDLRLFNHNPSSSRRAKCQD
RNKNEIALTRLSTSSTSTSPSARTRAVQQQKDSQRSYHYLQQCRAREKAK
LLQELAFENSFKQPPHVPAELQRVHVAYLSVPKTSNPYGHLLCRLLHARR
ETQQRGGRKRRRRRERKQEEQEGGQKEEDGQEEQEQEQEEEEEEKEGDRT
SESSFLLSAERRRLLLQKVVLREVVARRWQQQQQQQQQQQQQQRFKHRRP
QQEGEDIDGAAADEERDSTPHVAAAPAFTAPASTPAAGELLPSTSRFMPQ
DKIPPSEVEAFLAAIEEDLVTTIAALHVAVQSVNGIDRNGDEDEEEEGAN
DGTGGGRGEKYGEGVLTRVGRRLKGYYGQMKVLEPFRVPFDFKLEARKRR
EGVGEGGAVGRVEEEVLKKVEKGNEMKRELRTLLDLMVKGGIVGALTLAE
MLRNKYRVDEEEEDENEDEEGEEASESRWPSLVDEDEEGKVDMSEYKSPV
TAPKRQGKIKKRGERFASEALWGREEVGRTGRQWEGGDGEEEEEGDEEYE
EGEDEEELSRLLEEEGEEEQEEEEEEEVVWTESFDRHYQAFFYFNERTGK
SQWHKPKAPYVAYDEEEGDDV*
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Synonyms
Publications