jgi.p|Nanoce1779_2|597379, gene_6573 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|597379
Unique Namegene_6573
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:178876..181191 +

Link to JBrowse

Properties
Property NameValue
TranscriptId597465
ProteinId597379
Product namePyridoxal phosphate-dependent transferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:178876..181191 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004838L-tyrosine:2-oxoglutarate aminotransferase activity
GO:0008483transaminase activity
GO:0016769transferase activity, transferring nitrogenous groups
GO:0003824catalytic activity
GO:0030170pyridoxal phosphate binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02540NO06G02540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597379mRNA_6573-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597379mRNA_6573Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|597379

>mRNA_6573-protein ID=mRNA_6573-protein|Name=jgi.p|Nanoce1779_2|597379|organism=Nannochloropsis oceanica|type=polypeptide|length=550bp
MPPLGDVKACQASESMARTVAPRITPSSKTSTRVFAEAKSAEEPFPLSPI
RGHARSLGGFPPSSSSSSSSPFPTTSIPTTTESPLLPWRLKSSRQAARIS
NPVRNIVDHLKPNPAHPLPCLNFALGDPTAYASQGHLLCPDALVDTVIRH
AREGLHNGYTCSAGALDARQALARAFSYEGEGAKRLTADDVIIASGGSGA
LEIAMAALLNEGDAVLIPRPGFALYRVIAQSLGAVTLPYDLLPEKNWAID
MVALEATIVEYNSSSRGIIKAILINNPSNPCGNIFSLPNLLALLDVARRY
CLPIISDEIYGQVCFPGEAFHPLGTLTRDVPVLTIGGLAKQYAVPGWRVG
WVLIQDPLGLLEVVEEGGKEEGNEGGGVSVRQGLKNLTQLILGANTLAQS
VIPTLFPSTPSHSLETFHANYVHLLAENARFVQEMLLPVVRKERGREGGP
IVGVSLPNRPQGTLYMLLKVDARAFGDLDDDVAFCAALLQEENLVLLPGQ
CFGVPGYVRLVLTPPQPMLAEGLRRLRDFCGRHACAEGIPGGEGEGAVV*
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Synonyms
Publications